RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
DHFR-202ENST00000504396 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
DHFR-202ENST00000504396 NUTM2FA1L443 756 aa13.62□□□□□ -0.23
DHFR-202ENST00000504396 BMP2KQ9NSY1 1161 aaPredicted RBP13.62□□□□□ -0.23
DHFR-202ENST00000504396 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
DHFR-202ENST00000504396 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
DHFR-202ENST00000504396 ATRNO75882 1429 aa13.61□□□□□ -0.23
DHFR-202ENST00000504396 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
DHFR-202ENST00000504396 PCDHB8Q9UN66 801 aa13.61□□□□□ -0.23
DHFR-202ENST00000504396 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
DHFR-202ENST00000504396 STK26Q9P289 416 aa13.6□□□□□ -0.23
DHFR-202ENST00000504396 FOXO3O43524 673 aa13.59□□□□□ -0.23
DHFR-202ENST00000504396 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
DHFR-202ENST00000504396 TIE1P35590 1138 aa13.59□□□□□ -0.23
DHFR-202ENST00000504396 MYOM2P54296 1465 aa13.59□□□□□ -0.23
DHFR-202ENST00000504396 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
DHFR-202ENST00000504396 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.24
DHFR-202ENST00000504396 PXDNQ92626 1479 aa13.58□□□□□ -0.24
DHFR-202ENST00000504396 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
DHFR-202ENST00000504396 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
DHFR-202ENST00000504396 BCL9LQ86UU0 1499 aa13.56□□□□□ -0.24
DHFR-202ENST00000504396 TTLL13PA6NNM8 815 aa13.56□□□□□ -0.24
DHFR-202ENST00000504396 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
DHFR-202ENST00000504396 WAPLQ7Z5K2 1190 aa13.55□□□□□ -0.24
DHFR-202ENST00000504396 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
DHFR-202ENST00000504396 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
DHFR-202ENST00000504396 KIF1AQ12756 1690 aa13.54□□□□□ -0.24
DHFR-202ENST00000504396 CCDC125Q86Z20 511 aa13.54□□□□□ -0.24
DHFR-202ENST00000504396 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
DHFR-202ENST00000504396 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
DHFR-202ENST00000504396 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
DHFR-202ENST00000504396 TECPR2O15040 1411 aa13.53□□□□□ -0.24
DHFR-202ENST00000504396 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
DHFR-202ENST00000504396 IFT172Q9UG01 1749 aa13.52□□□□□ -0.24
DHFR-202ENST00000504396 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.24
DHFR-202ENST00000504396 USP32Q8NFA0 1604 aa13.52□□□□□ -0.24
DHFR-202ENST00000504396 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
DHFR-202ENST00000504396 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
DHFR-202ENST00000504396 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.25
DHFR-202ENST00000504396 RALGAPBQ86X10 1494 aa13.52□□□□□ -0.25
DHFR-202ENST00000504396 ANKRD30BQ9BXX2 1392 aa13.52□□□□□ -0.25
DHFR-202ENST00000504396 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
DHFR-202ENST00000504396 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
DHFR-202ENST00000504396 UNC5CLQ8IV45 518 aa13.51□□□□□ -0.25
DHFR-202ENST00000504396 EP400Q96L91 3159 aa13.51□□□□□ -0.25
DHFR-202ENST00000504396 GLI3P10071 1580 aa13.51□□□□□ -0.25
DHFR-202ENST00000504396 BLMP54132 1417 aaPredicted RBP13.5□□□□□ -0.25
DHFR-202ENST00000504396 A0A0G2JS52 829 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 MYT1Q01538 1121 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 SPATA31A3Q5VYP0 1347 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 YTHDC2Q9H6S0 1430 aaKnown RBP13.49□□□□□ -0.25
DHFR-202ENST00000504396 SLIT2O94813 1529 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 PLCH1Q4KWH8 1693 aa13.49□□□□□ -0.25
DHFR-202ENST00000504396 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
DHFR-202ENST00000504396 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
DHFR-202ENST00000504396 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
DHFR-202ENST00000504396 PIK3C2GO75747 1445 aa13.48□□□□□ -0.25
DHFR-202ENST00000504396 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
DHFR-202ENST00000504396 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
DHFR-202ENST00000504396 SLC39A7Q92504 469 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 METRNQ9UJH8 293 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 TRIM35Q9UPQ4 493 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 PSME1Q06323 249 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
DHFR-202ENST00000504396 LHX8Q68G74 356 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 DEFB132Q7Z7B7 95 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 PHF8Q9UPP1 1060 aa13.47□□□□□ -0.25
DHFR-202ENST00000504396 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.26
DHFR-202ENST00000504396 ABCA3Q99758 1704 aa13.45□□□□□ -0.26
DHFR-202ENST00000504396 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
DHFR-202ENST00000504396 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
DHFR-202ENST00000504396 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
DHFR-202ENST00000504396 C7P10643 843 aa13.44□□□□□ -0.26
DHFR-202ENST00000504396 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
DHFR-202ENST00000504396 VPS72Q15906 364 aa13.43□□□□□ -0.26
DHFR-202ENST00000504396 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
DHFR-202ENST00000504396 PSEN1P49768 467 aa13.42□□□□□ -0.26
DHFR-202ENST00000504396 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
DHFR-202ENST00000504396 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
DHFR-202ENST00000504396 POGKQ9P215 609 aa13.42□□□□□ -0.26
DHFR-202ENST00000504396 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
DHFR-202ENST00000504396 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
DHFR-202ENST00000504396 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
DHFR-202ENST00000504396 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
DHFR-202ENST00000504396 BAG6P46379 1132 aa13.39□□□□□ -0.27
DHFR-202ENST00000504396 PDAP1Q13442 181 aaKnown RBP13.39□□□□□ -0.27
DHFR-202ENST00000504396 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
DHFR-202ENST00000504396 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
DHFR-202ENST00000504396 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
DHFR-202ENST00000504396 FAM98CQ17RN3 349 aaKnown RBP13.39□□□□□ -0.27
DHFR-202ENST00000504396 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
DHFR-202ENST00000504396 LRP5O75197 1615 aa13.38□□□□□ -0.27
DHFR-202ENST00000504396 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
DHFR-202ENST00000504396 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
DHFR-202ENST00000504396 HIRIP3Q9BW71 556 aaPredicted RBP13.38□□□□□ -0.27
DHFR-202ENST00000504396 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms