RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 PTPRMP28827 1452 aa23.57■■□□□ 1.36
LINC00461-203ENST00000504246 TBC1D32Q96NH3 1257 aa23.56■■□□□ 1.36
LINC00461-203ENST00000504246 STK26Q9P289 416 aa23.56■■□□□ 1.36
LINC00461-203ENST00000504246 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
LINC00461-203ENST00000504246 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
LINC00461-203ENST00000504246 TMEM131LA2VDJ0 1609 aa23.56■■□□□ 1.36
LINC00461-203ENST00000504246 CLTCQ00610 1675 aaKnown RBP23.56■■□□□ 1.36
LINC00461-203ENST00000504246 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
LINC00461-203ENST00000504246 YEATS2Q9ULM3 1422 aa23.55■■□□□ 1.36
LINC00461-203ENST00000504246 TRIM35Q9UPQ4 493 aa23.54■■□□□ 1.36
LINC00461-203ENST00000504246 PNNQ9H307 717 aaKnown RBP23.54■■□□□ 1.36
LINC00461-203ENST00000504246 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
LINC00461-203ENST00000504246 FYB1O15117 783 aa23.52■■□□□ 1.36
LINC00461-203ENST00000504246 TRIM27P14373 513 aa23.51■■□□□ 1.35
LINC00461-203ENST00000504246 HDAC1Q13547 482 aaPredicted RBP23.51■■□□□ 1.35
LINC00461-203ENST00000504246 YTHDC2Q9H6S0 1430 aaKnown RBP23.51■■□□□ 1.35
LINC00461-203ENST00000504246 CD163L1Q9NR16 1453 aa23.51■■□□□ 1.35
LINC00461-203ENST00000504246 ATF7IPQ6VMQ6 1270 aa23.51■■□□□ 1.35
LINC00461-203ENST00000504246 SSH1Q8WYL5 1049 aa23.5■■□□□ 1.35
LINC00461-203ENST00000504246 PRAM1Q96QH2 718 aa23.5■■□□□ 1.35
LINC00461-203ENST00000504246 POGKQ9P215 609 aa23.5■■□□□ 1.35
LINC00461-203ENST00000504246 HDGFL2Q7Z4V5 671 aaPredicted RBP23.5■■□□□ 1.35
LINC00461-203ENST00000504246 MINK1Q8N4C8 1332 aaPredicted RBP23.5■■□□□ 1.35
LINC00461-203ENST00000504246 DIAPH1O60610 1272 aaKnown RBP23.49■■□□□ 1.35
LINC00461-203ENST00000504246 PNPLA6Q8IY17 1366 aa23.48■■□□□ 1.35
LINC00461-203ENST00000504246 ITPRIPQ8IWB1 547 aa23.48■■□□□ 1.35
LINC00461-203ENST00000504246 KIF16BQ96L93 1317 aa23.47■■□□□ 1.35
LINC00461-203ENST00000504246 RIPK4P57078 832 aa23.47■■□□□ 1.35
LINC00461-203ENST00000504246 BRPF3Q9ULD4 1205 aa23.47■■□□□ 1.35
LINC00461-203ENST00000504246 SLKQ9H2G2 1235 aaPredicted RBP23.47■■□□□ 1.35
LINC00461-203ENST00000504246 ANTXR1Q9H6X2 564 aa23.46■■□□□ 1.35
LINC00461-203ENST00000504246 IPO8O15397 1037 aaKnown RBP23.45■■□□□ 1.35
LINC00461-203ENST00000504246 TBC1D2Q9BYX2 928 aa23.45■■□□□ 1.34
LINC00461-203ENST00000504246 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
LINC00461-203ENST00000504246 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
LINC00461-203ENST00000504246 RTN4Q9NQC3 1192 aaKnown RBP23.44■■□□□ 1.34
LINC00461-203ENST00000504246 KIF20BQ96Q89 1820 aa23.44■■□□□ 1.34
LINC00461-203ENST00000504246 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
LINC00461-203ENST00000504246 SMC5Q8IY18 1101 aa23.43■■□□□ 1.34
LINC00461-203ENST00000504246 ALKQ9UM73 1620 aa23.42■■□□□ 1.34
LINC00461-203ENST00000504246 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
LINC00461-203ENST00000504246 FCHSD2O94868 740 aa23.42■■□□□ 1.34
LINC00461-203ENST00000504246 CDK19Q9BWU1 502 aa23.42■■□□□ 1.34
LINC00461-203ENST00000504246 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
LINC00461-203ENST00000504246 TMEM57Q8N5G2 664 aa23.41■■□□□ 1.34
LINC00461-203ENST00000504246 ZBTB40Q9NUA8 1239 aa23.4■■□□□ 1.34
LINC00461-203ENST00000504246 ZNF428Q96B54 188 aa23.39■■□□□ 1.34
LINC00461-203ENST00000504246 C22orf23Q9BZE7 217 aa23.39■■□□□ 1.34
LINC00461-203ENST00000504246 LRRC7Q96NW7 1537 aa23.39■■□□□ 1.34
LINC00461-203ENST00000504246 CABP1Q9NZU7 370 aa23.38■■□□□ 1.33
LINC00461-203ENST00000504246 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
LINC00461-203ENST00000504246 ATP7BP35670 1465 aa23.37■■□□□ 1.33
LINC00461-203ENST00000504246 MFAP1P55081 439 aaKnown RBP23.36■■□□□ 1.33
LINC00461-203ENST00000504246 FBXO31Q5XUX0 539 aaPredicted RBP23.36■■□□□ 1.33
LINC00461-203ENST00000504246 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
LINC00461-203ENST00000504246 BRPF1P55201 1214 aaPredicted RBP23.36■■□□□ 1.33
LINC00461-203ENST00000504246 DLC1Q96QB1 1528 aa23.36■■□□□ 1.33
LINC00461-203ENST00000504246 RSPH6AQ9H0K4 717 aa23.35■■□□□ 1.33
LINC00461-203ENST00000504246 PRKAR2BP31323 418 aa23.34■■□□□ 1.33
LINC00461-203ENST00000504246 STAG3Q9UJ98 1225 aa23.34■■□□□ 1.33
LINC00461-203ENST00000504246 CALD1Q05682 793 aaKnown RBP23.33■■□□□ 1.33
LINC00461-203ENST00000504246 NUCB1Q02818 461 aa23.33■■□□□ 1.33
LINC00461-203ENST00000504246 CHMP4BQ9H444 224 aaKnown RBP23.33■■□□□ 1.33
LINC00461-203ENST00000504246 REREQ9P2R6 1566 aa23.32■■□□□ 1.32
LINC00461-203ENST00000504246 POLKQ9UBT6 870 aa23.32■■□□□ 1.32
LINC00461-203ENST00000504246 NFE2L2Q16236 605 aa23.3■■□□□ 1.32
LINC00461-203ENST00000504246 AGLP35573 1532 aa23.3■■□□□ 1.32
LINC00461-203ENST00000504246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.3■■□□□ 1.32
LINC00461-203ENST00000504246 CHMP5Q9NZZ3 219 aa23.28■■□□□ 1.32
LINC00461-203ENST00000504246 L1TD1Q5T7N2 865 aaKnown RBP23.28■■□□□ 1.32
LINC00461-203ENST00000504246 ARHGAP45Q92619 1136 aa23.28■■□□□ 1.32
LINC00461-203ENST00000504246 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
LINC00461-203ENST00000504246 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
LINC00461-203ENST00000504246 CHD1LQ86WJ1 897 aa23.27■■□□□ 1.32
LINC00461-203ENST00000504246 HSCBQ8IWL3 235 aa23.27■■□□□ 1.32
LINC00461-203ENST00000504246 A2ML1A8K2U0 1454 aa23.27■■□□□ 1.32
LINC00461-203ENST00000504246 PIK3R4Q99570 1358 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 SPATA31D1Q6ZQQ2 1576 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 GNAI1P63096 354 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
LINC00461-203ENST00000504246 EDC4Q6P2E9 1401 aaKnown RBP23.25■■□□□ 1.31
LINC00461-203ENST00000504246 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
LINC00461-203ENST00000504246 DIP2BQ9P265 1576 aa23.25■■□□□ 1.31
LINC00461-203ENST00000504246 RBM25P49756 843 aaKnown RBP23.25■■□□□ 1.31
LINC00461-203ENST00000504246 GCC1Q96CN9 775 aa23.25■■□□□ 1.31
LINC00461-203ENST00000504246 RIMS2Q9UQ26 1411 aa23.24■■□□□ 1.31
LINC00461-203ENST00000504246 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
LINC00461-203ENST00000504246 VAMP4O75379 141 aa23.24■■□□□ 1.31
LINC00461-203ENST00000504246 MCM4P33991 863 aa23.24■■□□□ 1.31
LINC00461-203ENST00000504246 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
LINC00461-203ENST00000504246 SPRYD3Q8NCJ5 442 aa23.24■■□□□ 1.31
LINC00461-203ENST00000504246 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
LINC00461-203ENST00000504246 ZBTB7BO15156 539 aaPredicted RBP23.23■■□□□ 1.31
LINC00461-203ENST00000504246 BMP2KLQ5H9B9 411 aa23.23■■□□□ 1.31
LINC00461-203ENST00000504246 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
LINC00461-203ENST00000504246 CPSF1Q10570 1443 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms