RNA–Protein interactions for RNA: ENST00000503670.5

DDR1-251, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-251ENST00000503670 JCADQ9P266 1359 aa12.36□□□□□ -0.43
DDR1-251ENST00000503670 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
DDR1-251ENST00000503670 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
DDR1-251ENST00000503670 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
DDR1-251ENST00000503670 A0A1W2PP64 1363 aa12.35□□□□□ -0.43
DDR1-251ENST00000503670 ARHGEF10O15013 1369 aa12.35□□□□□ -0.43
DDR1-251ENST00000503670 CCDC7Q96M83 1385 aa12.35□□□□□ -0.43
DDR1-251ENST00000503670 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
DDR1-251ENST00000503670 COL22A1Q8NFW1 1626 aaPredicted RBP12.34□□□□□ -0.43
DDR1-251ENST00000503670 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
DDR1-251ENST00000503670 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
DDR1-251ENST00000503670 WASHC2AQ641Q2 1341 aa12.34□□□□□ -0.43
DDR1-251ENST00000503670 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
DDR1-251ENST00000503670 TTC21BQ7Z4L5 1316 aa12.33□□□□□ -0.44
DDR1-251ENST00000503670 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
DDR1-251ENST00000503670 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
DDR1-251ENST00000503670 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
DDR1-251ENST00000503670 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
DDR1-251ENST00000503670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDR1-251ENST00000503670 PANK3Q9H999 370 aa12.3□□□□□ -0.44
DDR1-251ENST00000503670 ABCA3Q99758 1704 aa12.3□□□□□ -0.44
DDR1-251ENST00000503670 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
DDR1-251ENST00000503670 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
DDR1-251ENST00000503670 CRYBG1Q9Y4K1 1723 aa12.29□□□□□ -0.44
DDR1-251ENST00000503670 NLRP6P59044 892 aa12.29□□□□□ -0.44
DDR1-251ENST00000503670 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
DDR1-251ENST00000503670 CARD14Q9BXL6 1004 aa12.29□□□□□ -0.44
DDR1-251ENST00000503670 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
DDR1-251ENST00000503670 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
DDR1-251ENST00000503670 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
DDR1-251ENST00000503670 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
DDR1-251ENST00000503670 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
DDR1-251ENST00000503670 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
DDR1-251ENST00000503670 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
DDR1-251ENST00000503670 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
DDR1-251ENST00000503670 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.44
DDR1-251ENST00000503670 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
DDR1-251ENST00000503670 NME9Q86XW9 330 aa12.27□□□□□ -0.45
DDR1-251ENST00000503670 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
DDR1-251ENST00000503670 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
DDR1-251ENST00000503670 USP19O94966 1318 aa12.26□□□□□ -0.45
DDR1-251ENST00000503670 CGNL1Q0VF96 1302 aa12.26□□□□□ -0.45
DDR1-251ENST00000503670 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
DDR1-251ENST00000503670 FYB1O15117 783 aa12.25□□□□□ -0.45
DDR1-251ENST00000503670 COG3Q96JB2 828 aa12.25□□□□□ -0.45
DDR1-251ENST00000503670 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
DDR1-251ENST00000503670 SLIT3O75094 1523 aa12.25□□□□□ -0.45
DDR1-251ENST00000503670 LRP6O75581 1613 aa12.25□□□□□ -0.45
DDR1-251ENST00000503670 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
DDR1-251ENST00000503670 MEX3CQ5U5Q3 659 aaKnown RBP12.24□□□□□ -0.45
DDR1-251ENST00000503670 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
DDR1-251ENST00000503670 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
DDR1-251ENST00000503670 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
DDR1-251ENST00000503670 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
DDR1-251ENST00000503670 ADAMTS2O95450 1211 aa12.23□□□□□ -0.45
DDR1-251ENST00000503670 GCP02774 474 aa12.23□□□□□ -0.45
DDR1-251ENST00000503670 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
DDR1-251ENST00000503670 NSD2O96028 1365 aa12.22□□□□□ -0.45
DDR1-251ENST00000503670 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
DDR1-251ENST00000503670 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
DDR1-251ENST00000503670 NFAT5O94916 1531 aa12.21□□□□□ -0.46
DDR1-251ENST00000503670 LTN1O94822 1766 aa12.2□□□□□ -0.46
DDR1-251ENST00000503670 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
DDR1-251ENST00000503670 SOX12O15370 315 aa12.2□□□□□ -0.46
DDR1-251ENST00000503670 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
DDR1-251ENST00000503670 C8orf37Q96NL8 207 aa12.2□□□□□ -0.46
DDR1-251ENST00000503670 PLCH1Q4KWH8 1693 aa12.19□□□□□ -0.46
DDR1-251ENST00000503670 CPDO75976 1380 aa12.19□□□□□ -0.46
DDR1-251ENST00000503670 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
DDR1-251ENST00000503670 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
DDR1-251ENST00000503670 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
DDR1-251ENST00000503670 PRDM11Q9NQV5 511 aa12.19□□□□□ -0.46
DDR1-251ENST00000503670 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
DDR1-251ENST00000503670 NWD2Q9ULI1 1742 aa12.18□□□□□ -0.46
DDR1-251ENST00000503670 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
DDR1-251ENST00000503670 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
DDR1-251ENST00000503670 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
DDR1-251ENST00000503670 MORC1Q86VD1 984 aa12.17□□□□□ -0.46
DDR1-251ENST00000503670 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
DDR1-251ENST00000503670 PHF23Q9BUL5 403 aaPredicted RBP12.17□□□□□ -0.46
DDR1-251ENST00000503670 AFF2P51816 1311 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 COL18A1P39060 1754 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
DDR1-251ENST00000503670 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 SLIT2O94813 1529 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 ABCC6O95255 1503 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 LMO7Q8WWI1 1683 aa12.16□□□□□ -0.46
DDR1-251ENST00000503670 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
DDR1-251ENST00000503670 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
DDR1-251ENST00000503670 FNBP4Q8N3X1 1017 aaPredicted RBP12.15□□□□□ -0.46
DDR1-251ENST00000503670 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
DDR1-251ENST00000503670 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
DDR1-251ENST00000503670 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
DDR1-251ENST00000503670 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
DDR1-251ENST00000503670 USP21Q9UK80 565 aa12.14□□□□□ -0.47
DDR1-251ENST00000503670 NRAPQ86VF7 1730 aa12.14□□□□□ -0.47
DDR1-251ENST00000503670 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
DDR1-251ENST00000503670 FBLN1P23142 703 aa12.13□□□□□ -0.47
DDR1-251ENST00000503670 RRS1Q15050 365 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms