RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
SNCA-207ENST00000502987 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
SNCA-207ENST00000502987 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
SNCA-207ENST00000502987 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
SNCA-207ENST00000502987 EIF3AQ14152 1382 aaKnown RBP15.59■□□□□ 0.09
SNCA-207ENST00000502987 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
SNCA-207ENST00000502987 ANKARQ7Z5J8 1434 aa15.59■□□□□ 0.09
SNCA-207ENST00000502987 ADGRB1O14514 1584 aa15.58■□□□□ 0.09
SNCA-207ENST00000502987 USP32Q8NFA0 1604 aa15.58■□□□□ 0.09
SNCA-207ENST00000502987 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
SNCA-207ENST00000502987 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
SNCA-207ENST00000502987 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.57■□□□□ 0.08
SNCA-207ENST00000502987 EP400Q96L91 3159 aa15.56■□□□□ 0.08
SNCA-207ENST00000502987 A0A0G2JS52 829 aa15.56■□□□□ 0.08
SNCA-207ENST00000502987 MYT1Q01538 1121 aa15.56■□□□□ 0.08
SNCA-207ENST00000502987 ADGRB2O60241 1585 aa15.55■□□□□ 0.08
SNCA-207ENST00000502987 SLIT2O94813 1529 aa15.55■□□□□ 0.08
SNCA-207ENST00000502987 RALGAPBQ86X10 1494 aa15.54■□□□□ 0.08
SNCA-207ENST00000502987 PRR36Q9H6K5 1346 aa15.54■□□□□ 0.08
SNCA-207ENST00000502987 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
SNCA-207ENST00000502987 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
SNCA-207ENST00000502987 VPS72Q15906 364 aa15.53■□□□□ 0.08
SNCA-207ENST00000502987 NUDT16Q96DE0 195 aaKnown RBP15.53■□□□□ 0.08
SNCA-207ENST00000502987 PLCH1Q4KWH8 1693 aa15.53■□□□□ 0.08
SNCA-207ENST00000502987 TULP4Q9NRJ4 1543 aa15.53■□□□□ 0.08
SNCA-207ENST00000502987 ARHGEF28Q8N1W1 1705 aaKnown RBP15.52■□□□□ 0.08
SNCA-207ENST00000502987 ABCA3Q99758 1704 aa15.52■□□□□ 0.08
SNCA-207ENST00000502987 SEPT12Q8IYM1 358 aa15.52■□□□□ 0.08
SNCA-207ENST00000502987 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
SNCA-207ENST00000502987 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
SNCA-207ENST00000502987 GLI3P10071 1580 aa15.52■□□□□ 0.07
SNCA-207ENST00000502987 BRWD3Q6RI45 1802 aa15.52■□□□□ 0.07
SNCA-207ENST00000502987 NWD2Q9ULI1 1742 aa15.51■□□□□ 0.07
SNCA-207ENST00000502987 SF3B2Q13435 895 aaKnown RBP15.51■□□□□ 0.07
SNCA-207ENST00000502987 BTG4Q9NY30 223 aa15.51■□□□□ 0.07
SNCA-207ENST00000502987 ITSN1Q15811 1721 aa15.51■□□□□ 0.07
SNCA-207ENST00000502987 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
SNCA-207ENST00000502987 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
SNCA-207ENST00000502987 ALS2Q96Q42 1657 aa15.48■□□□□ 0.07
SNCA-207ENST00000502987 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
SNCA-207ENST00000502987 NBPF1Q3BBV0 1214 aa15.48■□□□□ 0.07
SNCA-207ENST00000502987 FAM98CQ17RN3 349 aaKnown RBP15.47■□□□□ 0.07
SNCA-207ENST00000502987 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
SNCA-207ENST00000502987 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
SNCA-207ENST00000502987 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
SNCA-207ENST00000502987 KIAA1210Q9ULL0 1709 aa15.46■□□□□ 0.07
SNCA-207ENST00000502987 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
SNCA-207ENST00000502987 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
SNCA-207ENST00000502987 COL14A1Q05707 1796 aaKnown RBP15.46■□□□□ 0.07
SNCA-207ENST00000502987 ATP7BP35670 1465 aa15.45■□□□□ 0.06
SNCA-207ENST00000502987 ACEP12821 1306 aa15.44■□□□□ 0.06
SNCA-207ENST00000502987 BLMP54132 1417 aaPredicted RBP15.44■□□□□ 0.06
SNCA-207ENST00000502987 ONECUT3O60422 494 aaPredicted RBP15.44■□□□□ 0.06
SNCA-207ENST00000502987 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
SNCA-207ENST00000502987 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
SNCA-207ENST00000502987 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
SNCA-207ENST00000502987 CHRNA2Q15822 529 aa15.43■□□□□ 0.06
SNCA-207ENST00000502987 DEFB132Q7Z7B7 95 aa15.43■□□□□ 0.06
SNCA-207ENST00000502987 ABTB2Q8N961 1025 aa15.43■□□□□ 0.06
SNCA-207ENST00000502987 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
SNCA-207ENST00000502987 NRAPQ86VF7 1730 aa15.43■□□□□ 0.06
SNCA-207ENST00000502987 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
SNCA-207ENST00000502987 EVA1CP58658 441 aa15.42■□□□□ 0.06
SNCA-207ENST00000502987 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
SNCA-207ENST00000502987 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
SNCA-207ENST00000502987 CABP2Q9NPB3 220 aa15.41■□□□□ 0.06
SNCA-207ENST00000502987 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
SNCA-207ENST00000502987 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
SNCA-207ENST00000502987 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
SNCA-207ENST00000502987 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
SNCA-207ENST00000502987 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
SNCA-207ENST00000502987 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
SNCA-207ENST00000502987 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
SNCA-207ENST00000502987 CRYBG1Q9Y4K1 1723 aa15.39■□□□□ 0.05
SNCA-207ENST00000502987 POLR3AO14802 1390 aaPredicted RBP15.38■□□□□ 0.05
SNCA-207ENST00000502987 PPIP5K1Q6PFW1 1433 aa15.38■□□□□ 0.05
SNCA-207ENST00000502987 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
SNCA-207ENST00000502987 BAG6P46379 1132 aa15.38■□□□□ 0.05
SNCA-207ENST00000502987 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
SNCA-207ENST00000502987 TOPAZ1Q8N9V7 1692 aa15.38■□□□□ 0.05
SNCA-207ENST00000502987 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
SNCA-207ENST00000502987 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
SNCA-207ENST00000502987 SP7Q8TDD2 431 aaPredicted RBP15.37■□□□□ 0.05
SNCA-207ENST00000502987 CABP1Q9NZU7 370 aa15.36■□□□□ 0.05
SNCA-207ENST00000502987 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
SNCA-207ENST00000502987 SPATA31A1Q5TZJ5 1347 aa15.35■□□□□ 0.05
SNCA-207ENST00000502987 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
SNCA-207ENST00000502987 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
SNCA-207ENST00000502987 SPDYE2Q495Y8 402 aa15.34■□□□□ 0.05
SNCA-207ENST00000502987 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
SNCA-207ENST00000502987 NLRP6P59044 892 aa15.33■□□□□ 0.04
SNCA-207ENST00000502987 ROCK2O75116 1388 aaKnown RBP15.33■□□□□ 0.04
SNCA-207ENST00000502987 GCP02774 474 aa15.32■□□□□ 0.04
SNCA-207ENST00000502987 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
SNCA-207ENST00000502987 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
SNCA-207ENST00000502987 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
SNCA-207ENST00000502987 LARP1Q6PKG0 1096 aaKnown RBP15.31■□□□□ 0.04
SNCA-207ENST00000502987 TRPM1Q7Z4N2 1603 aa15.31■□□□□ 0.04
SNCA-207ENST00000502987 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SNCA-207ENST00000502987 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms