RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-216ENST00000502848 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-216ENST00000502848 HSPA2P54652 639 aa12.2□□□□□ -0.46
NR1I3-216ENST00000502848 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-216ENST00000502848 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-216ENST00000502848 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-216ENST00000502848 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
NR1I3-216ENST00000502848 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
NR1I3-216ENST00000502848 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
NR1I3-216ENST00000502848 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NR1I3-216ENST00000502848 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NR1I3-216ENST00000502848 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
NR1I3-216ENST00000502848 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
NR1I3-216ENST00000502848 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
NR1I3-216ENST00000502848 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
NR1I3-216ENST00000502848 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-216ENST00000502848 MST1RQ04912 1400 aa12.17□□□□□ -0.46
NR1I3-216ENST00000502848 MSH6P52701 1360 aa12.17□□□□□ -0.46
NR1I3-216ENST00000502848 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
NR1I3-216ENST00000502848 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
NR1I3-216ENST00000502848 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
NR1I3-216ENST00000502848 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
NR1I3-216ENST00000502848 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
NR1I3-216ENST00000502848 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
NR1I3-216ENST00000502848 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-216ENST00000502848 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
NR1I3-216ENST00000502848 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
NR1I3-216ENST00000502848 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
NR1I3-216ENST00000502848 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
NR1I3-216ENST00000502848 COG3Q96JB2 828 aa12.14□□□□□ -0.47
NR1I3-216ENST00000502848 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
NR1I3-216ENST00000502848 ATF3P18847 181 aa12.13□□□□□ -0.47
NR1I3-216ENST00000502848 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NR1I3-216ENST00000502848 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-216ENST00000502848 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-216ENST00000502848 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-216ENST00000502848 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NR1I3-216ENST00000502848 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
NR1I3-216ENST00000502848 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-216ENST00000502848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-216ENST00000502848 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
NR1I3-216ENST00000502848 MTHFSP49914 203 aa12.1□□□□□ -0.47
NR1I3-216ENST00000502848 NME9Q86XW9 330 aa12.1□□□□□ -0.47
NR1I3-216ENST00000502848 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
NR1I3-216ENST00000502848 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
NR1I3-216ENST00000502848 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
NR1I3-216ENST00000502848 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
NR1I3-216ENST00000502848 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-216ENST00000502848 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NR1I3-216ENST00000502848 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
NR1I3-216ENST00000502848 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
NR1I3-216ENST00000502848 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-216ENST00000502848 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
NR1I3-216ENST00000502848 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
NR1I3-216ENST00000502848 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
NR1I3-216ENST00000502848 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NR1I3-216ENST00000502848 SLIT3O75094 1523 aa12.06□□□□□ -0.48
NR1I3-216ENST00000502848 PSME1Q06323 249 aa12.06□□□□□ -0.48
NR1I3-216ENST00000502848 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NR1I3-216ENST00000502848 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-216ENST00000502848 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
NR1I3-216ENST00000502848 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
NR1I3-216ENST00000502848 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NR1I3-216ENST00000502848 ABCC6O95255 1503 aa12.05□□□□□ -0.48
NR1I3-216ENST00000502848 USP19O94966 1318 aa12.05□□□□□ -0.48
NR1I3-216ENST00000502848 FLT4P35916 1363 aa12.05□□□□□ -0.48
NR1I3-216ENST00000502848 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NR1I3-216ENST00000502848 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NR1I3-216ENST00000502848 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-216ENST00000502848 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
NR1I3-216ENST00000502848 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
NR1I3-216ENST00000502848 PXDNQ92626 1479 aa12.03□□□□□ -0.48
NR1I3-216ENST00000502848 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NR1I3-216ENST00000502848 NLRP6P59044 892 aa12.03□□□□□ -0.48
NR1I3-216ENST00000502848 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
NR1I3-216ENST00000502848 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
NR1I3-216ENST00000502848 ABTB2Q8N961 1025 aa12.02□□□□□ -0.49
NR1I3-216ENST00000502848 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
NR1I3-216ENST00000502848 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
NR1I3-216ENST00000502848 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
NR1I3-216ENST00000502848 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NR1I3-216ENST00000502848 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NR1I3-216ENST00000502848 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
NR1I3-216ENST00000502848 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
NR1I3-216ENST00000502848 FOXO3O43524 673 aa12□□□□□ -0.49
NR1I3-216ENST00000502848 BRINP3Q76B58 766 aa12□□□□□ -0.49
NR1I3-216ENST00000502848 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
NR1I3-216ENST00000502848 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
NR1I3-216ENST00000502848 ZNF521Q96K83 1311 aa12□□□□□ -0.49
NR1I3-216ENST00000502848 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
NR1I3-216ENST00000502848 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-216ENST00000502848 IL13P35225 146 aa11.99□□□□□ -0.49
NR1I3-216ENST00000502848 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-216ENST00000502848 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
NR1I3-216ENST00000502848 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
NR1I3-216ENST00000502848 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
NR1I3-216ENST00000502848 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
NR1I3-216ENST00000502848 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
NR1I3-216ENST00000502848 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
NR1I3-216ENST00000502848 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms