RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 F12P00748 615 aaPredicted RBP11.09□□□□□ -0.63
CCSER1-202ENST00000502478 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
CCSER1-202ENST00000502478 MPNDQ8N594 471 aa11.09□□□□□ -0.63
CCSER1-202ENST00000502478 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
CCSER1-202ENST00000502478 TLL2Q9Y6L7 1015 aa11.09□□□□□ -0.63
CCSER1-202ENST00000502478 WFS1O76024 890 aa11.08□□□□□ -0.64
CCSER1-202ENST00000502478 CTHP32929 405 aa11.08□□□□□ -0.64
CCSER1-202ENST00000502478 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
CCSER1-202ENST00000502478 TUSC1Q2TAM9 212 aa11.08□□□□□ -0.64
CCSER1-202ENST00000502478 SLC24A3Q9HC58 644 aa11.08□□□□□ -0.64
CCSER1-202ENST00000502478 CSPP1Q1MSJ5 1256 aa11.07□□□□□ -0.64
CCSER1-202ENST00000502478 MAP10Q9P2G4 905 aa11.07□□□□□ -0.64
CCSER1-202ENST00000502478 LIMD1Q9UGP4 676 aa11.07□□□□□ -0.64
CCSER1-202ENST00000502478 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
CCSER1-202ENST00000502478 CAPN5O15484 640 aaPredicted RBP11.06□□□□□ -0.64
CCSER1-202ENST00000502478 TRIM46Q7Z4K8 759 aa11.05□□□□□ -0.64
CCSER1-202ENST00000502478 BMP1P13497 986 aa11.04□□□□□ -0.64
CCSER1-202ENST00000502478 QPCTQ16769 361 aa11.04□□□□□ -0.64
CCSER1-202ENST00000502478 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
CCSER1-202ENST00000502478 LILRB3O75022 631 aa11.03□□□□□ -0.64
CCSER1-202ENST00000502478 TERTO14746 1132 aaKnown RBP11.02□□□□□ -0.65
CCSER1-202ENST00000502478 NNTQ13423 1086 aa11.02□□□□□ -0.65
CCSER1-202ENST00000502478 FAM174AQ8TBP5 190 aa11.02□□□□□ -0.65
CCSER1-202ENST00000502478 FOXJ1Q92949 421 aa11.01□□□□□ -0.65
CCSER1-202ENST00000502478 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
CCSER1-202ENST00000502478 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
CCSER1-202ENST00000502478 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
CCSER1-202ENST00000502478 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
CCSER1-202ENST00000502478 CDK15Q96Q40 435 aa11□□□□□ -0.65
CCSER1-202ENST00000502478 WIPF1O43516 503 aa10.99□□□□□ -0.65
CCSER1-202ENST00000502478 ADH1CP00326 375 aa10.99□□□□□ -0.65
CCSER1-202ENST00000502478 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
CCSER1-202ENST00000502478 LCE2CQ5TA81 110 aa10.99□□□□□ -0.65
CCSER1-202ENST00000502478 TSC1Q92574 1164 aa10.99□□□□□ -0.65
CCSER1-202ENST00000502478 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
CCSER1-202ENST00000502478 TIMP2P16035 220 aa10.96□□□□□ -0.65
CCSER1-202ENST00000502478 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
CCSER1-202ENST00000502478 HELBQ8NG08 1087 aaPredicted RBP10.96□□□□□ -0.65
CCSER1-202ENST00000502478 KLF16Q9BXK1 252 aaPredicted RBP10.96□□□□□ -0.65
CCSER1-202ENST00000502478 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
CCSER1-202ENST00000502478 WDR4P57081 412 aaKnown RBP10.95□□□□□ -0.66
CCSER1-202ENST00000502478 BPHLQ86WA6 291 aaPredicted RBP10.95□□□□□ -0.66
CCSER1-202ENST00000502478 ARMC2Q8NEN0 867 aa10.95□□□□□ -0.66
CCSER1-202ENST00000502478 AGERQ15109 404 aa10.94□□□□□ -0.66
CCSER1-202ENST00000502478 ZFP42Q96MM3 310 aa10.94□□□□□ -0.66
CCSER1-202ENST00000502478 MRPL14Q6P1L8 145 aaKnown RBP10.93□□□□□ -0.66
CCSER1-202ENST00000502478 C1QTNF2Q9BXJ5 285 aa10.93□□□□□ -0.66
CCSER1-202ENST00000502478 NR5A1Q13285 461 aa10.92□□□□□ -0.66
CCSER1-202ENST00000502478 ARID5BQ14865 1188 aa10.92□□□□□ -0.66
CCSER1-202ENST00000502478 NBPF14Q5TI25 921 aa10.92□□□□□ -0.66
CCSER1-202ENST00000502478 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
CCSER1-202ENST00000502478 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
CCSER1-202ENST00000502478 NXF1Q9UBU9 619 aaKnown RBP10.92□□□□□ -0.66
CCSER1-202ENST00000502478 NR3C2P08235 984 aa10.9□□□□□ -0.66
CCSER1-202ENST00000502478 GRM5P41594 1212 aa10.9□□□□□ -0.66
CCSER1-202ENST00000502478 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
CCSER1-202ENST00000502478 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
CCSER1-202ENST00000502478 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
CCSER1-202ENST00000502478 SCARF1Q14162 830 aa10.89□□□□□ -0.67
CCSER1-202ENST00000502478 SLC16A10Q8TF71 515 aa10.89□□□□□ -0.67
CCSER1-202ENST00000502478 ZIC2O95409 532 aaPredicted RBP10.88□□□□□ -0.67
CCSER1-202ENST00000502478 TRMT44Q8IYL2 757 aaKnown RBP10.88□□□□□ -0.67
CCSER1-202ENST00000502478 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
CCSER1-202ENST00000502478 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.67
CCSER1-202ENST00000502478 ITPKCQ96DU7 683 aa10.87□□□□□ -0.67
CCSER1-202ENST00000502478 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
CCSER1-202ENST00000502478 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
CCSER1-202ENST00000502478 MAP4K5Q9Y4K4 846 aa10.87□□□□□ -0.67
CCSER1-202ENST00000502478 H3BM21 787 aa10.85□□□□□ -0.67
CCSER1-202ENST00000502478 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
CCSER1-202ENST00000502478 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
CCSER1-202ENST00000502478 SH3D19Q5HYK7 790 aa10.85□□□□□ -0.67
CCSER1-202ENST00000502478 KDM4CQ9H3R0 1056 aa10.85□□□□□ -0.67
CCSER1-202ENST00000502478 FSHRP23945 695 aa10.84□□□□□ -0.67
CCSER1-202ENST00000502478 GPBP1L1Q9HC44 474 aaPredicted RBP10.84□□□□□ -0.67
CCSER1-202ENST00000502478 MAGEB6P1A0A0J9YX57 407 aa10.83□□□□□ -0.68
CCSER1-202ENST00000502478 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
CCSER1-202ENST00000502478 IRF7Q92985 503 aa10.83□□□□□ -0.68
CCSER1-202ENST00000502478 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCSER1-202ENST00000502478 VEGFBP49765 207 aa10.82□□□□□ -0.68
CCSER1-202ENST00000502478 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
CCSER1-202ENST00000502478 MEIOBQ8N635 442 aa10.82□□□□□ -0.68
CCSER1-202ENST00000502478 DDRGK1Q96HY6 314 aa10.82□□□□□ -0.68
CCSER1-202ENST00000502478 FAM117AQ9C073 453 aa10.82□□□□□ -0.68
CCSER1-202ENST00000502478 ERFEQ4G0M1 354 aa10.81□□□□□ -0.68
CCSER1-202ENST00000502478 PPP2R2DQ66LE6 453 aa10.81□□□□□ -0.68
CCSER1-202ENST00000502478 LRRN4Q8WUT4 740 aa10.81□□□□□ -0.68
CCSER1-202ENST00000502478 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
CCSER1-202ENST00000502478 GMPRP36959 345 aa10.8□□□□□ -0.68
CCSER1-202ENST00000502478 PDXDC2PQ6P474 469 aa10.8□□□□□ -0.68
CCSER1-202ENST00000502478 PROCA1Q8NCQ7 364 aaPredicted RBP10.8□□□□□ -0.68
CCSER1-202ENST00000502478 FKBPLQ9UIM3 349 aa10.8□□□□□ -0.68
CCSER1-202ENST00000502478 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
CCSER1-202ENST00000502478 C6orf118Q5T5N4 469 aa10.79□□□□□ -0.68
CCSER1-202ENST00000502478 LINC00528Q8N1L1 170 aa10.79□□□□□ -0.68
CCSER1-202ENST00000502478 BCANQ96GW7 911 aa10.79□□□□□ -0.68
CCSER1-202ENST00000502478 ERBB4Q15303 1308 aa10.79□□□□□ -0.68
CCSER1-202ENST00000502478 CCDC116Q8IYX3 515 aa10.78□□□□□ -0.68
CCSER1-202ENST00000502478 EMILIN1Q9Y6C2 1016 aa10.78□□□□□ -0.68
CCSER1-202ENST00000502478 ZC3H4Q9UPT8 1303 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms