RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 ATRNO75882 1429 aa6.59□□□□□ -1.35
MATR3-202ENST00000502422 C1orf167Q5SNV9 1468 aa6.59□□□□□ -1.35
MATR3-202ENST00000502422 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.36
MATR3-202ENST00000502422 DEFB132Q7Z7B7 95 aa6.59□□□□□ -1.36
MATR3-202ENST00000502422 ANP32EQ9BTT0 268 aa6.59□□□□□ -1.36
MATR3-202ENST00000502422 TAOK2Q9UL54 1235 aa6.59□□□□□ -1.36
MATR3-202ENST00000502422 RALGAPBQ86X10 1494 aa6.58□□□□□ -1.36
MATR3-202ENST00000502422 YY1P25490 414 aa6.58□□□□□ -1.36
MATR3-202ENST00000502422 ESCO1Q5FWF5 840 aa6.58□□□□□ -1.36
MATR3-202ENST00000502422 DIEXFQ68CQ4 756 aaKnown RBP6.58□□□□□ -1.36
MATR3-202ENST00000502422 NUP155O75694 1391 aa6.58□□□□□ -1.36
MATR3-202ENST00000502422 NINLQ9Y2I6 1382 aa6.58□□□□□ -1.36
MATR3-202ENST00000502422 LAMC1P11047 1609 aa6.57□□□□□ -1.36
MATR3-202ENST00000502422 NPHP3Q7Z494 1330 aa6.57□□□□□ -1.36
MATR3-202ENST00000502422 NALCNQ8IZF0 1738 aa6.57□□□□□ -1.36
MATR3-202ENST00000502422 MAMSTRQ6ZN01 415 aa6.57□□□□□ -1.36
MATR3-202ENST00000502422 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.57□□□□□ -1.36
MATR3-202ENST00000502422 BCL9LQ86UU0 1499 aa6.56□□□□□ -1.36
MATR3-202ENST00000502422 PAXIP1Q6ZW49 1069 aaPredicted RBP6.56□□□□□ -1.36
MATR3-202ENST00000502422 UNC5CLQ8IV45 518 aa6.56□□□□□ -1.36
MATR3-202ENST00000502422 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.56□□□□□ -1.36
MATR3-202ENST00000502422 CCDC9Q9Y3X0 531 aaKnown RBP6.56□□□□□ -1.36
MATR3-202ENST00000502422 NRXN3Q9Y4C0 1643 aa6.56□□□□□ -1.36
MATR3-202ENST00000502422 A0A0G2JS52 829 aa6.56□□□□□ -1.36
MATR3-202ENST00000502422 PSDA5PKW4 1024 aaPredicted RBP6.56□□□□□ -1.36
MATR3-202ENST00000502422 FOXO3O43524 673 aa6.56□□□□□ -1.36
MATR3-202ENST00000502422 FARP1Q9Y4F1 1045 aaPredicted RBP6.56□□□□□ -1.36
MATR3-202ENST00000502422 LRPPRCP42704 1394 aaKnown RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 PARD3Q8TEW0 1356 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 IQGAP3Q86VI3 1631 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 VGFO15240 615 aaPredicted RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 CHRM1P11229 460 aaPredicted RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 BAG6P46379 1132 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 MARF1Q9Y4F3 1742 aaKnown RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 TULP1O00294 542 aaPredicted RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 RIOK3O14730 519 aaKnown RBP6.55□□□□□ -1.36
MATR3-202ENST00000502422 SLC34A2O95436 690 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 PYGBP11216 843 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 ITGAEP38570 1179 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 SEPT12Q8IYM1 358 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 CFAP44Q96MT7 982 aa6.55□□□□□ -1.36
MATR3-202ENST00000502422 COL22A1Q8NFW1 1626 aaPredicted RBP6.54□□□□□ -1.36
MATR3-202ENST00000502422 NUTM2FA1L443 756 aa6.54□□□□□ -1.36
MATR3-202ENST00000502422 DISP2A7MBM2 1401 aa6.54□□□□□ -1.36
MATR3-202ENST00000502422 MYOM2P54296 1465 aa6.54□□□□□ -1.36
MATR3-202ENST00000502422 KRT27Q7Z3Y8 459 aa6.53□□□□□ -1.36
MATR3-202ENST00000502422 HOMEZQ8IX15 550 aa6.53□□□□□ -1.36
MATR3-202ENST00000502422 HS6ST3Q8IZP7 471 aa6.53□□□□□ -1.36
MATR3-202ENST00000502422 ROBO2Q9HCK4 1378 aa6.53□□□□□ -1.36
MATR3-202ENST00000502422 HFM1A2PYH4 1435 aa6.52□□□□□ -1.37
MATR3-202ENST00000502422 TSPYL2Q9H2G4 693 aaPredicted RBP6.52□□□□□ -1.37
MATR3-202ENST00000502422 BRWD3Q6RI45 1802 aa6.52□□□□□ -1.37
MATR3-202ENST00000502422 ROCK1Q13464 1354 aa6.52□□□□□ -1.37
MATR3-202ENST00000502422 KIF1BO60333 1816 aa6.52□□□□□ -1.37
MATR3-202ENST00000502422 GLI3P10071 1580 aa6.51□□□□□ -1.37
MATR3-202ENST00000502422 CD44P16070 742 aaKnown RBP6.51□□□□□ -1.37
MATR3-202ENST00000502422 LMOD2Q6P5Q4 547 aa6.51□□□□□ -1.37
MATR3-202ENST00000502422 SLIT2O94813 1529 aa6.51□□□□□ -1.37
MATR3-202ENST00000502422 NEXMIFQ5QGS0 1516 aa6.51□□□□□ -1.37
MATR3-202ENST00000502422 EN1Q05925 392 aaPredicted RBP6.51□□□□□ -1.37
MATR3-202ENST00000502422 R3HDM1Q15032 1099 aaKnown RBP6.51□□□□□ -1.37
MATR3-202ENST00000502422 VPS72Q15906 364 aa6.51□□□□□ -1.37
MATR3-202ENST00000502422 SPRYD3Q8NCJ5 442 aa6.51□□□□□ -1.37
MATR3-202ENST00000502422 ADGRB2O60241 1585 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 PXDNQ92626 1479 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 PSME1Q06323 249 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 KRT28Q7Z3Y7 464 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 RGPD1P0DJD0 1748 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 SPATA31A3Q5VYP0 1347 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 ONECUT3O60422 494 aaPredicted RBP6.5□□□□□ -1.37
MATR3-202ENST00000502422 NKX1-1Q15270 411 aaPredicted RBP6.5□□□□□ -1.37
MATR3-202ENST00000502422 CABLES1Q8TDN4 633 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 STK26Q9P289 416 aa6.5□□□□□ -1.37
MATR3-202ENST00000502422 C1QTNF8P60827 252 aa6.49□□□□□ -1.37
MATR3-202ENST00000502422 FAM98CQ17RN3 349 aaKnown RBP6.49□□□□□ -1.37
MATR3-202ENST00000502422 RPGRIP1LQ68CZ1 1315 aa6.49□□□□□ -1.37
MATR3-202ENST00000502422 SENP3-EIF4A1A0A087X0R7 540 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 TPRNQ4KMQ1 711 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 TSHZ2Q9NRE2 1034 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 KDM2AQ9Y2K7 1162 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 CCDC144AA2RUR9 1427 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 CLTCL1P53675 1640 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 USP32Q8NFA0 1604 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 NAIPQ13075 1403 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 CDC42BPGQ6DT37 1551 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 VSIG10Q8N0Z9 540 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 AATKQ6ZMQ8 1374 aa6.48□□□□□ -1.37
MATR3-202ENST00000502422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.47□□□□□ -1.37
MATR3-202ENST00000502422 FAM182BQ5T319 152 aa6.47□□□□□ -1.37
MATR3-202ENST00000502422 ZFP91Q96JP5 570 aaPredicted RBP6.47□□□□□ -1.37
MATR3-202ENST00000502422 SGIP1Q9BQI5 828 aa6.47□□□□□ -1.37
MATR3-202ENST00000502422 CCDC61Q9Y6R9 512 aa6.47□□□□□ -1.37
MATR3-202ENST00000502422 STK25O00506 426 aa6.47□□□□□ -1.37
MATR3-202ENST00000502422 EZH2Q15910 746 aaKnown RBP6.47□□□□□ -1.37
MATR3-202ENST00000502422 BTG4Q9NY30 223 aa6.47□□□□□ -1.37
MATR3-202ENST00000502422 PPP1R1BQ9UD71 204 aaPredicted RBP6.47□□□□□ -1.37
MATR3-202ENST00000502422 PRAG1Q86YV5 1406 aa6.46□□□□□ -1.37
MATR3-202ENST00000502422 NWD2Q9ULI1 1742 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms