RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 A0A1W2PP64 1363 aa19.73■□□□□ 0.75
RNF4-202ENST00000502316 ARHGEF10O15013 1369 aa19.73■□□□□ 0.75
RNF4-202ENST00000502316 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
RNF4-202ENST00000502316 KTN1Q86UP2 1357 aaKnown RBP19.72■□□□□ 0.75
RNF4-202ENST00000502316 ANKRD36BQ8N2N9 1353 aa19.72■□□□□ 0.75
RNF4-202ENST00000502316 TERF2IPQ9NYB0 399 aa19.72■□□□□ 0.75
RNF4-202ENST00000502316 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
RNF4-202ENST00000502316 KIF7Q2M1P5 1343 aa19.71■□□□□ 0.75
RNF4-202ENST00000502316 MED1Q15648 1581 aaPredicted RBP19.7■□□□□ 0.74
RNF4-202ENST00000502316 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
RNF4-202ENST00000502316 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
RNF4-202ENST00000502316 TTC21BQ7Z4L5 1316 aa19.68■□□□□ 0.74
RNF4-202ENST00000502316 LRP6O75581 1613 aa19.67■□□□□ 0.74
RNF4-202ENST00000502316 PIK3C2AO00443 1686 aa19.67■□□□□ 0.74
RNF4-202ENST00000502316 TTC21AQ8NDW8 1320 aa19.67■□□□□ 0.74
RNF4-202ENST00000502316 CRYBG1Q9Y4K1 1723 aa19.67■□□□□ 0.74
RNF4-202ENST00000502316 CCDC7Q96M83 1385 aa19.67■□□□□ 0.74
RNF4-202ENST00000502316 ABCA3Q99758 1704 aa19.66■□□□□ 0.74
RNF4-202ENST00000502316 WASHC2AQ641Q2 1341 aa19.66■□□□□ 0.74
RNF4-202ENST00000502316 LMOD2Q6P5Q4 547 aa19.65■□□□□ 0.74
RNF4-202ENST00000502316 ABTB2Q8N961 1025 aa19.64■□□□□ 0.73
RNF4-202ENST00000502316 POLR3GLQ9BT43 218 aa19.64■□□□□ 0.73
RNF4-202ENST00000502316 USP54Q70EL1 1684 aa19.64■□□□□ 0.73
RNF4-202ENST00000502316 USP19O94966 1318 aa19.63■□□□□ 0.73
RNF4-202ENST00000502316 MARF1Q9Y4F3 1742 aaKnown RBP19.62■□□□□ 0.73
RNF4-202ENST00000502316 PHRF1Q9P1Y6 1649 aaKnown RBP19.62■□□□□ 0.73
RNF4-202ENST00000502316 USP31Q70CQ4 1352 aa19.61■□□□□ 0.73
RNF4-202ENST00000502316 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
RNF4-202ENST00000502316 NUTM2BA6NNL0 878 aaPredicted RBP19.6■□□□□ 0.73
RNF4-202ENST00000502316 NUTM2EB1AL46 878 aaPredicted RBP19.6■□□□□ 0.73
RNF4-202ENST00000502316 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
RNF4-202ENST00000502316 NUTM2AQ8IVF1 878 aaPredicted RBP19.6■□□□□ 0.73
RNF4-202ENST00000502316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.73
RNF4-202ENST00000502316 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
RNF4-202ENST00000502316 SLIT3O75094 1523 aa19.6■□□□□ 0.73
RNF4-202ENST00000502316 NUTM2GQ5VZR2 741 aa19.59■□□□□ 0.73
RNF4-202ENST00000502316 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
RNF4-202ENST00000502316 NLRP6P59044 892 aa19.58■□□□□ 0.72
RNF4-202ENST00000502316 PANK3Q9H999 370 aa19.58■□□□□ 0.72
RNF4-202ENST00000502316 OVOS2A0A0J9YW53 1432 aa19.58■□□□□ 0.72
RNF4-202ENST00000502316 OVOS2Q6IE36 1432 aa19.58■□□□□ 0.72
RNF4-202ENST00000502316 NME9Q86XW9 330 aa19.57■□□□□ 0.72
RNF4-202ENST00000502316 KIF20BQ96Q89 1820 aa19.55■□□□□ 0.72
RNF4-202ENST00000502316 FYB1O15117 783 aa19.54■□□□□ 0.72
RNF4-202ENST00000502316 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
RNF4-202ENST00000502316 GCP02774 474 aa19.54■□□□□ 0.72
RNF4-202ENST00000502316 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
RNF4-202ENST00000502316 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
RNF4-202ENST00000502316 MEX3CQ5U5Q3 659 aaKnown RBP19.53■□□□□ 0.72
RNF4-202ENST00000502316 CPDO75976 1380 aa19.53■□□□□ 0.72
RNF4-202ENST00000502316 CGNL1Q0VF96 1302 aa19.52■□□□□ 0.72
RNF4-202ENST00000502316 NFAT5O94916 1531 aa19.52■□□□□ 0.72
RNF4-202ENST00000502316 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
RNF4-202ENST00000502316 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
RNF4-202ENST00000502316 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
RNF4-202ENST00000502316 PER1O15534 1290 aaPredicted RBP19.5■□□□□ 0.71
RNF4-202ENST00000502316 COG3Q96JB2 828 aa19.5■□□□□ 0.71
RNF4-202ENST00000502316 C8orf37Q96NL8 207 aa19.5■□□□□ 0.71
RNF4-202ENST00000502316 SLIT2O94813 1529 aa19.5■□□□□ 0.71
RNF4-202ENST00000502316 COL14A1Q05707 1796 aaKnown RBP19.49■□□□□ 0.71
RNF4-202ENST00000502316 NSD2O96028 1365 aa19.49■□□□□ 0.71
RNF4-202ENST00000502316 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
RNF4-202ENST00000502316 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
RNF4-202ENST00000502316 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
RNF4-202ENST00000502316 PLCH1Q4KWH8 1693 aa19.48■□□□□ 0.71
RNF4-202ENST00000502316 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
RNF4-202ENST00000502316 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
RNF4-202ENST00000502316 ZC3H6P61129 1189 aaKnown RBP19.47■□□□□ 0.71
RNF4-202ENST00000502316 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
RNF4-202ENST00000502316 KNSTRNQ9Y448 316 aa19.47■□□□□ 0.71
RNF4-202ENST00000502316 AFF2P51816 1311 aa19.47■□□□□ 0.71
RNF4-202ENST00000502316 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
RNF4-202ENST00000502316 AMER1Q5JTC6 1135 aaPredicted RBP19.46■□□□□ 0.71
RNF4-202ENST00000502316 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
RNF4-202ENST00000502316 RGS17Q9UGC6 210 aaPredicted RBP19.46■□□□□ 0.71
RNF4-202ENST00000502316 ABCC6O95255 1503 aa19.46■□□□□ 0.71
RNF4-202ENST00000502316 ARHGEF25Q86VW2 580 aa19.45■□□□□ 0.7
RNF4-202ENST00000502316 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
RNF4-202ENST00000502316 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
RNF4-202ENST00000502316 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
RNF4-202ENST00000502316 NPC1L1Q9UHC9 1359 aa19.44■□□□□ 0.7
RNF4-202ENST00000502316 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
RNF4-202ENST00000502316 NRAPQ86VF7 1730 aa19.43■□□□□ 0.7
RNF4-202ENST00000502316 COL18A1P39060 1754 aa19.43■□□□□ 0.7
RNF4-202ENST00000502316 SOX12O15370 315 aa19.42■□□□□ 0.7
RNF4-202ENST00000502316 CHRNA2Q15822 529 aa19.42■□□□□ 0.7
RNF4-202ENST00000502316 ZNF772Q68DY9 489 aaPredicted RBP19.42■□□□□ 0.7
RNF4-202ENST00000502316 LTN1O94822 1766 aa19.42■□□□□ 0.7
RNF4-202ENST00000502316 CAMTA1Q9Y6Y1 1673 aa19.41■□□□□ 0.7
RNF4-202ENST00000502316 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
RNF4-202ENST00000502316 USP21Q9UK80 565 aa19.41■□□□□ 0.7
RNF4-202ENST00000502316 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
RNF4-202ENST00000502316 BTG4Q9NY30 223 aa19.4■□□□□ 0.7
RNF4-202ENST00000502316 ATRNO75882 1429 aa19.39■□□□□ 0.69
RNF4-202ENST00000502316 MAP3K19Q56UN5 1328 aa19.38■□□□□ 0.69
RNF4-202ENST00000502316 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
RNF4-202ENST00000502316 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
RNF4-202ENST00000502316 FBLN1P23142 703 aa19.37■□□□□ 0.69
RNF4-202ENST00000502316 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
RNF4-202ENST00000502316 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms