RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 PTGER2P43116 358 aa8.97□□□□□ -0.97
SPTA1-209ENST00000498708 PLPP6Q8IY26 295 aa8.97□□□□□ -0.97
SPTA1-209ENST00000498708 PTCD2Q8WV60 388 aaKnown RBP8.97□□□□□ -0.97
SPTA1-209ENST00000498708 PIK3C2BO00750 1634 aa8.97□□□□□ -0.97
SPTA1-209ENST00000498708 LRP5O75197 1615 aa8.97□□□□□ -0.97
SPTA1-209ENST00000498708 CEP152O94986 1710 aa8.97□□□□□ -0.97
SPTA1-209ENST00000498708 IFFO2Q5TF58 517 aa8.96□□□□□ -0.98
SPTA1-209ENST00000498708 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
SPTA1-209ENST00000498708 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.98
SPTA1-209ENST00000498708 MAST1Q9Y2H9 1570 aa8.95□□□□□ -0.98
SPTA1-209ENST00000498708 TBC1D12O60347 775 aa8.95□□□□□ -0.98
SPTA1-209ENST00000498708 BRINP3Q76B58 766 aa8.95□□□□□ -0.98
SPTA1-209ENST00000498708 LHX6Q9UPM6 363 aa8.95□□□□□ -0.98
SPTA1-209ENST00000498708 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.94□□□□□ -0.98
SPTA1-209ENST00000498708 DSG2Q14126 1118 aa8.94□□□□□ -0.98
SPTA1-209ENST00000498708 CCDC125Q86Z20 511 aa8.94□□□□□ -0.98
SPTA1-209ENST00000498708 MROH1Q8NDA8 1641 aa8.94□□□□□ -0.98
SPTA1-209ENST00000498708 ADAMTS2O95450 1211 aa8.93□□□□□ -0.98
SPTA1-209ENST00000498708 DEFB132Q7Z7B7 95 aa8.93□□□□□ -0.98
SPTA1-209ENST00000498708 BCANQ96GW7 911 aa8.93□□□□□ -0.98
SPTA1-209ENST00000498708 CAMSAP2Q08AD1 1489 aa8.93□□□□□ -0.98
SPTA1-209ENST00000498708 CCDC141Q6ZP82 1450 aa8.92□□□□□ -0.98
SPTA1-209ENST00000498708 SETD5Q9C0A6 1442 aa8.92□□□□□ -0.98
SPTA1-209ENST00000498708 LSM11P83369 360 aaKnown RBP eCLIP8.92□□□□□ -0.98
SPTA1-209ENST00000498708 ANKRD13DQ6ZTN6 518 aa8.92□□□□□ -0.98
SPTA1-209ENST00000498708 C14orf37Q86TY3 774 aa8.92□□□□□ -0.98
SPTA1-209ENST00000498708 DDX17Q92841 729 aaKnown RBP8.92□□□□□ -0.98
SPTA1-209ENST00000498708 ATF3P18847 181 aa8.91□□□□□ -0.98
SPTA1-209ENST00000498708 YY1P25490 414 aa8.91□□□□□ -0.98
SPTA1-209ENST00000498708 IDI1Q13907 227 aa8.91□□□□□ -0.98
SPTA1-209ENST00000498708 CADPS2Q86UW7 1296 aa8.91□□□□□ -0.98
SPTA1-209ENST00000498708 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
SPTA1-209ENST00000498708 C19orf44Q9H6X5 657 aa8.91□□□□□ -0.98
SPTA1-209ENST00000498708 USP21Q9UK80 565 aa8.91□□□□□ -0.98
SPTA1-209ENST00000498708 EFCAB6Q5THR3 1501 aa8.9□□□□□ -0.98
SPTA1-209ENST00000498708 FYCO1Q9BQS8 1478 aa8.9□□□□□ -0.98
SPTA1-209ENST00000498708 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
SPTA1-209ENST00000498708 CRISPLD2Q9H0B8 497 aa8.9□□□□□ -0.98
SPTA1-209ENST00000498708 TRPC5Q9UL62 973 aaPredicted RBP8.9□□□□□ -0.98
SPTA1-209ENST00000498708 PNPLA6Q8IY17 1366 aa8.89□□□□□ -0.99
SPTA1-209ENST00000498708 HRCP23327 699 aa8.89□□□□□ -0.99
SPTA1-209ENST00000498708 PDE4AP27815 886 aa8.89□□□□□ -0.99
SPTA1-209ENST00000498708 LRRC59Q96AG4 307 aaKnown RBP8.89□□□□□ -0.99
SPTA1-209ENST00000498708 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
SPTA1-209ENST00000498708 NHSL1Q5SYE7 1610 aa8.88□□□□□ -0.99
SPTA1-209ENST00000498708 ASXL1Q8IXJ9 1541 aa8.88□□□□□ -0.99
SPTA1-209ENST00000498708 ATRNO75882 1429 aa8.88□□□□□ -0.99
SPTA1-209ENST00000498708 ARHGAP31Q2M1Z3 1444 aa8.88□□□□□ -0.99
SPTA1-209ENST00000498708 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
SPTA1-209ENST00000498708 RSPH4AQ5TD94 716 aa8.87□□□□□ -0.99
SPTA1-209ENST00000498708 FNBP4Q8N3X1 1017 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-209ENST00000498708 BLMP54132 1417 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-209ENST00000498708 BCL9LQ86UU0 1499 aa8.86□□□□□ -0.99
SPTA1-209ENST00000498708 ARHGAP33O14559 1287 aa8.86□□□□□ -0.99
SPTA1-209ENST00000498708 TSPY4P0CV99 314 aa8.86□□□□□ -0.99
SPTA1-209ENST00000498708 TSPY10P0CW01 314 aa8.86□□□□□ -0.99
SPTA1-209ENST00000498708 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
SPTA1-209ENST00000498708 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
SPTA1-209ENST00000498708 EIF2AK4Q9P2K8 1649 aaKnown RBP8.86□□□□□ -0.99
SPTA1-209ENST00000498708 OXER1Q8TDS5 423 aa8.85□□□□□ -0.99
SPTA1-209ENST00000498708 ARHGEF5Q12774 1597 aa8.84□□□□□ -0.99
SPTA1-209ENST00000498708 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
SPTA1-209ENST00000498708 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
SPTA1-209ENST00000498708 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
SPTA1-209ENST00000498708 MYO5BQ9ULV0 1848 aa8.84□□□□□ -0.99
SPTA1-209ENST00000498708 PLEKHG1Q9ULL1 1385 aa8.84□□□□□ -0.99
SPTA1-209ENST00000498708 MST1RQ04912 1400 aa8.83□□□□□ -1
SPTA1-209ENST00000498708 ADGRB3O60242 1522 aa8.83□□□□□ -1
SPTA1-209ENST00000498708 ZFYVE9O95405 1425 aa8.82□□□□□ -1
SPTA1-209ENST00000498708 POTEEQ6S8J3 1075 aa8.82□□□□□ -1
SPTA1-209ENST00000498708 GJD4Q96KN9 370 aaPredicted RBP8.82□□□□□ -1
SPTA1-209ENST00000498708 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
SPTA1-209ENST00000498708 CEP162Q5TB80 1403 aa8.81□□□□□ -1
SPTA1-209ENST00000498708 UTRNP46939 3433 aa8.81□□□□□ -1
SPTA1-209ENST00000498708 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
SPTA1-209ENST00000498708 DDX27Q96GQ7 796 aaKnown RBP8.81□□□□□ -1
SPTA1-209ENST00000498708 ADAMTS13Q76LX8 1427 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 PTPRUQ92729 1446 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 TK2O00142 265 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 PPP1R15AO75807 674 aaPredicted RBP8.8□□□□□ -1
SPTA1-209ENST00000498708 R3HDM1Q15032 1099 aaKnown RBP8.8□□□□□ -1
SPTA1-209ENST00000498708 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 EHBP1L1Q8N3D4 1523 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 PTCH1Q13635 1447 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 RIMS2Q9UQ26 1411 aa8.8□□□□□ -1
SPTA1-209ENST00000498708 GLI3P10071 1580 aa8.79□□□□□ -1
SPTA1-209ENST00000498708 ADGRD1Q6QNK2 874 aa8.79□□□□□ -1
SPTA1-209ENST00000498708 NOS1P29475 1434 aa8.79□□□□□ -1
SPTA1-209ENST00000498708 DCCP43146 1447 aa8.79□□□□□ -1
SPTA1-209ENST00000498708 DUOX2Q9NRD8 1548 aa8.78□□□□□ -1
SPTA1-209ENST00000498708 UNC13BO14795 1591 aa8.78□□□□□ -1
SPTA1-209ENST00000498708 MFSD10Q14728 455 aa8.77□□□□□ -1.01
SPTA1-209ENST00000498708 SLC52A1Q9NWF4 448 aa8.77□□□□□ -1.01
SPTA1-209ENST00000498708 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
SPTA1-209ENST00000498708 MARF1Q9Y4F3 1742 aaKnown RBP8.77□□□□□ -1.01
SPTA1-209ENST00000498708 RALGAPBQ86X10 1494 aa8.77□□□□□ -1.01
SPTA1-209ENST00000498708 CEP350Q5VT06 3117 aa8.76□□□□□ -1.01
SPTA1-209ENST00000498708 TRPM2O94759 1503 aa8.76□□□□□ -1.01
SPTA1-209ENST00000498708 GCC2Q8IWJ2 1684 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms