RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 HDGFL2Q7Z4V5 671 aaPredicted RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
TUBA4A-210ENST00000498660 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
TUBA4A-210ENST00000498660 CGNL1Q0VF96 1302 aa11.95□□□□□ -0.5
TUBA4A-210ENST00000498660 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
TUBA4A-210ENST00000498660 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
TUBA4A-210ENST00000498660 AFF2P51816 1311 aa11.94□□□□□ -0.5
TUBA4A-210ENST00000498660 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
TUBA4A-210ENST00000498660 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
TUBA4A-210ENST00000498660 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
TUBA4A-210ENST00000498660 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
TUBA4A-210ENST00000498660 NUDT16Q96DE0 195 aaKnown RBP11.93□□□□□ -0.5
TUBA4A-210ENST00000498660 CARD14Q9BXL6 1004 aa11.93□□□□□ -0.5
TUBA4A-210ENST00000498660 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
TUBA4A-210ENST00000498660 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
TUBA4A-210ENST00000498660 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
TUBA4A-210ENST00000498660 PRR36Q9H6K5 1346 aa11.91□□□□□ -0.5
TUBA4A-210ENST00000498660 CABP1Q9NZU7 370 aa11.91□□□□□ -0.5
TUBA4A-210ENST00000498660 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
TUBA4A-210ENST00000498660 KIF1AQ12756 1690 aa11.91□□□□□ -0.5
TUBA4A-210ENST00000498660 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
TUBA4A-210ENST00000498660 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
TUBA4A-210ENST00000498660 DDX17Q92841 729 aaKnown RBP11.9□□□□□ -0.5
TUBA4A-210ENST00000498660 C8orf37Q96NL8 207 aa11.9□□□□□ -0.5
TUBA4A-210ENST00000498660 QTRT2Q9H974 415 aaKnown RBP11.9□□□□□ -0.5
TUBA4A-210ENST00000498660 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
TUBA4A-210ENST00000498660 RGS12O14924 1447 aa11.87□□□□□ -0.51
TUBA4A-210ENST00000498660 USP6P35125 1406 aa11.87□□□□□ -0.51
TUBA4A-210ENST00000498660 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
TUBA4A-210ENST00000498660 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
TUBA4A-210ENST00000498660 POLR3AO14802 1390 aaPredicted RBP11.87□□□□□ -0.51
TUBA4A-210ENST00000498660 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
TUBA4A-210ENST00000498660 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
TUBA4A-210ENST00000498660 PPP2R1AP30153 589 aa11.86□□□□□ -0.51
TUBA4A-210ENST00000498660 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
TUBA4A-210ENST00000498660 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
TUBA4A-210ENST00000498660 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
TUBA4A-210ENST00000498660 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
TUBA4A-210ENST00000498660 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
TUBA4A-210ENST00000498660 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
TUBA4A-210ENST00000498660 ACEP12821 1306 aa11.85□□□□□ -0.51
TUBA4A-210ENST00000498660 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
TUBA4A-210ENST00000498660 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
TUBA4A-210ENST00000498660 FNBP4Q8N3X1 1017 aaPredicted RBP11.83□□□□□ -0.52
TUBA4A-210ENST00000498660 TTC21AQ8NDW8 1320 aa11.83□□□□□ -0.52
TUBA4A-210ENST00000498660 INSRP06213 1382 aa11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 FYB1O15117 783 aa11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 GGNBP2Q9H3C7 697 aa11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 USP21Q9UK80 565 aa11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 SSH2Q76I76 1423 aa11.82□□□□□ -0.52
TUBA4A-210ENST00000498660 OVOS2A0A0J9YW53 1432 aa11.81□□□□□ -0.52
TUBA4A-210ENST00000498660 BLMP54132 1417 aaPredicted RBP11.81□□□□□ -0.52
TUBA4A-210ENST00000498660 OVOS2Q6IE36 1432 aa11.81□□□□□ -0.52
TUBA4A-210ENST00000498660 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
TUBA4A-210ENST00000498660 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
TUBA4A-210ENST00000498660 TTC21BQ7Z4L5 1316 aa11.81□□□□□ -0.52
TUBA4A-210ENST00000498660 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 COL22A1Q8NFW1 1626 aaPredicted RBP11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 TNNT2P45379 298 aaPredicted RBP11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 MARF1Q9Y4F3 1742 aaKnown RBP11.8□□□□□ -0.52
TUBA4A-210ENST00000498660 ATRNO75882 1429 aa11.79□□□□□ -0.52
TUBA4A-210ENST00000498660 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBA4A-210ENST00000498660 NME9Q86XW9 330 aa11.79□□□□□ -0.52
TUBA4A-210ENST00000498660 COG3Q96JB2 828 aa11.79□□□□□ -0.52
TUBA4A-210ENST00000498660 NPHP3Q7Z494 1330 aa11.79□□□□□ -0.52
TUBA4A-210ENST00000498660 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
TUBA4A-210ENST00000498660 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
TUBA4A-210ENST00000498660 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
TUBA4A-210ENST00000498660 COL3A1P02461 1466 aaPredicted RBP11.77□□□□□ -0.52
TUBA4A-210ENST00000498660 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
TUBA4A-210ENST00000498660 PXDNQ92626 1479 aa11.76□□□□□ -0.53
TUBA4A-210ENST00000498660 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
TUBA4A-210ENST00000498660 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
TUBA4A-210ENST00000498660 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
TUBA4A-210ENST00000498660 FOXO3O43524 673 aa11.75□□□□□ -0.53
TUBA4A-210ENST00000498660 MTHFSP49914 203 aa11.75□□□□□ -0.53
TUBA4A-210ENST00000498660 CCDC125Q86Z20 511 aa11.75□□□□□ -0.53
TUBA4A-210ENST00000498660 GJD4Q96KN9 370 aaPredicted RBP11.74□□□□□ -0.53
TUBA4A-210ENST00000498660 EP400Q96L91 3159 aa11.74□□□□□ -0.53
TUBA4A-210ENST00000498660 LTN1O94822 1766 aa11.73□□□□□ -0.53
TUBA4A-210ENST00000498660 XPCQ01831 940 aaPredicted RBP11.73□□□□□ -0.53
TUBA4A-210ENST00000498660 PSME1Q06323 249 aa11.73□□□□□ -0.53
TUBA4A-210ENST00000498660 PEAK1Q9H792 1746 aa11.73□□□□□ -0.53
TUBA4A-210ENST00000498660 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
TUBA4A-210ENST00000498660 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
TUBA4A-210ENST00000498660 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms