RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
GPATCH4-209ENST00000498641 PSME1Q06323 249 aa9.49□□□□□ -0.89
GPATCH4-209ENST00000498641 TTC21AQ8NDW8 1320 aa9.49□□□□□ -0.89
GPATCH4-209ENST00000498641 NALCNQ8IZF0 1738 aa9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 PPM1GO15355 546 aaPredicted RBP9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 CADPS2Q86UW7 1296 aa9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 MSH6P52701 1360 aa9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
GPATCH4-209ENST00000498641 STRCQ7RTU9 1775 aa9.47□□□□□ -0.89
GPATCH4-209ENST00000498641 TOPAZ1Q8N9V7 1692 aa9.47□□□□□ -0.89
GPATCH4-209ENST00000498641 SCAF1Q9H7N4 1312 aaKnown RBP9.47□□□□□ -0.89
GPATCH4-209ENST00000498641 ITSN1Q15811 1721 aa9.46□□□□□ -0.89
GPATCH4-209ENST00000498641 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.9
GPATCH4-209ENST00000498641 FOXO3O43524 673 aa9.46□□□□□ -0.9
GPATCH4-209ENST00000498641 FBLN1P23142 703 aa9.46□□□□□ -0.9
GPATCH4-209ENST00000498641 NLRP6P59044 892 aa9.46□□□□□ -0.9
GPATCH4-209ENST00000498641 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
GPATCH4-209ENST00000498641 NUDCQ9Y266 331 aa9.46□□□□□ -0.9
GPATCH4-209ENST00000498641 SOX12O15370 315 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 POLKQ9UBT6 870 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 ZBED9Q6R2W3 1325 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 DCCP43146 1447 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 C1orf167Q5SNV9 1468 aa9.45□□□□□ -0.9
GPATCH4-209ENST00000498641 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 U2AF1L5P0DN76 240 aaPredicted RBP9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 U2AF1Q01081 240 aaKnown RBP eCLIP9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 INSRP06213 1382 aa9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 LRRC7Q96NW7 1537 aa9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 MON2Q7Z3U7 1717 aa9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
GPATCH4-209ENST00000498641 KIF20BQ96Q89 1820 aa9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 STRCP1A6NGW2 1772 aa9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 MST1RQ04912 1400 aa9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 AATKQ6ZMQ8 1374 aa9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 RRS1Q15050 365 aaKnown RBP9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 LMOD2Q6P5Q4 547 aa9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 ILDR1Q86SU0 546 aaPredicted RBP9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 CCDC146Q8IYE0 955 aa9.43□□□□□ -0.9
GPATCH4-209ENST00000498641 BLMP54132 1417 aaPredicted RBP9.42□□□□□ -0.9
GPATCH4-209ENST00000498641 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
GPATCH4-209ENST00000498641 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
GPATCH4-209ENST00000498641 OVOS2A0A0J9YW53 1432 aa9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 OVOS2Q6IE36 1432 aa9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 PIAS4Q8N2W9 510 aaPredicted RBP9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 RGPD8O14715 1765 aaPredicted RBP9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 ANKRD26Q9UPS8 1709 aa9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
GPATCH4-209ENST00000498641 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
GPATCH4-209ENST00000498641 NPHP3Q7Z494 1330 aa9.4□□□□□ -0.9
GPATCH4-209ENST00000498641 APAF1O14727 1248 aa9.4□□□□□ -0.9
GPATCH4-209ENST00000498641 AMPHP49418 695 aa9.4□□□□□ -0.9
GPATCH4-209ENST00000498641 RUNDC1Q96C34 613 aa9.4□□□□□ -0.9
GPATCH4-209ENST00000498641 PNNQ9H307 717 aaKnown RBP9.4□□□□□ -0.9
GPATCH4-209ENST00000498641 BRINP3Q76B58 766 aa9.39□□□□□ -0.91
GPATCH4-209ENST00000498641 KCNH5Q8NCM2 988 aa9.39□□□□□ -0.91
GPATCH4-209ENST00000498641 DDX17Q92841 729 aaKnown RBP9.39□□□□□ -0.91
GPATCH4-209ENST00000498641 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 NEFMP07197 916 aa9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 IL13P35225 146 aa9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 CDK12Q9NYV4 1490 aaPredicted RBP9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 KIF1AQ12756 1690 aa9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 SMG6Q86US8 1419 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-209ENST00000498641 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 COL3A1P02461 1466 aaPredicted RBP9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 FCHSD2O94868 740 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 NEUROD2Q15784 382 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 HSP90AB2PQ58FF8 381 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 SBNO1A3KN83 1393 aa9.37□□□□□ -0.91
GPATCH4-209ENST00000498641 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
GPATCH4-209ENST00000498641 GCP02774 474 aa9.36□□□□□ -0.91
GPATCH4-209ENST00000498641 HMOX1P09601 288 aa9.36□□□□□ -0.91
GPATCH4-209ENST00000498641 EIF4A2Q14240 407 aaKnown RBP9.36□□□□□ -0.91
GPATCH4-209ENST00000498641 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
GPATCH4-209ENST00000498641 FLT4P35916 1363 aa9.36□□□□□ -0.91
GPATCH4-209ENST00000498641 HOXC9P31274 260 aa9.35□□□□□ -0.91
GPATCH4-209ENST00000498641 PRKAR2BP31323 418 aa9.35□□□□□ -0.91
GPATCH4-209ENST00000498641 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
GPATCH4-209ENST00000498641 SHPRHQ149N8 1683 aa9.35□□□□□ -0.91
GPATCH4-209ENST00000498641 SPATA31A3Q5VYP0 1347 aa9.34□□□□□ -0.91
GPATCH4-209ENST00000498641 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
GPATCH4-209ENST00000498641 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
GPATCH4-209ENST00000498641 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
GPATCH4-209ENST00000498641 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
GPATCH4-209ENST00000498641 KIF24Q5T7B8 1368 aa9.34□□□□□ -0.91
GPATCH4-209ENST00000498641 USP19O94966 1318 aa9.33□□□□□ -0.92
GPATCH4-209ENST00000498641 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms