RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CREBZFQ9NS37 354 aa16.02■□□□□ 0.16
ERCC8-208ENST00000497892 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
ERCC8-208ENST00000497892 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
ERCC8-208ENST00000497892 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
ERCC8-208ENST00000497892 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
ERCC8-208ENST00000497892 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
ERCC8-208ENST00000497892 SBNO2Q9Y2G9 1366 aa15.99■□□□□ 0.15
ERCC8-208ENST00000497892 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
ERCC8-208ENST00000497892 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
ERCC8-208ENST00000497892 FOXO3O43524 673 aa15.97■□□□□ 0.15
ERCC8-208ENST00000497892 CD44P16070 742 aaKnown RBP15.97■□□□□ 0.15
ERCC8-208ENST00000497892 PROM2Q8N271 834 aa15.97■□□□□ 0.15
ERCC8-208ENST00000497892 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
ERCC8-208ENST00000497892 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
ERCC8-208ENST00000497892 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
ERCC8-208ENST00000497892 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
ERCC8-208ENST00000497892 LRP6O75581 1613 aa15.95■□□□□ 0.14
ERCC8-208ENST00000497892 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
ERCC8-208ENST00000497892 NUDT16Q96DE0 195 aaKnown RBP15.94■□□□□ 0.14
ERCC8-208ENST00000497892 DISP3Q9P2K9 1392 aa15.93■□□□□ 0.14
ERCC8-208ENST00000497892 GABBR2O75899 941 aa15.93■□□□□ 0.14
ERCC8-208ENST00000497892 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
ERCC8-208ENST00000497892 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
ERCC8-208ENST00000497892 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
ERCC8-208ENST00000497892 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
ERCC8-208ENST00000497892 TNS3Q68CZ2 1445 aa15.92■□□□□ 0.14
ERCC8-208ENST00000497892 USP47Q96K76 1375 aa15.91■□□□□ 0.14
ERCC8-208ENST00000497892 CCDC61Q9Y6R9 512 aa15.91■□□□□ 0.14
ERCC8-208ENST00000497892 ALS2Q96Q42 1657 aa15.91■□□□□ 0.14
ERCC8-208ENST00000497892 PPIP5K1Q6PFW1 1433 aa15.91■□□□□ 0.14
ERCC8-208ENST00000497892 SBNO1A3KN83 1393 aa15.9■□□□□ 0.14
ERCC8-208ENST00000497892 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
ERCC8-208ENST00000497892 KRT28Q7Z3Y7 464 aa15.9■□□□□ 0.14
ERCC8-208ENST00000497892 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
ERCC8-208ENST00000497892 SPATA31A3Q5VYP0 1347 aa15.9■□□□□ 0.14
ERCC8-208ENST00000497892 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
ERCC8-208ENST00000497892 PSME1Q06323 249 aa15.88■□□□□ 0.13
ERCC8-208ENST00000497892 PLEKHG3A1L390 1219 aa15.87■□□□□ 0.13
ERCC8-208ENST00000497892 NGDNQ8NEJ9 315 aaKnown RBP15.87■□□□□ 0.13
ERCC8-208ENST00000497892 TESK2Q96S53 571 aa15.87■□□□□ 0.13
ERCC8-208ENST00000497892 MARF1Q9Y4F3 1742 aaKnown RBP15.87■□□□□ 0.13
ERCC8-208ENST00000497892 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
ERCC8-208ENST00000497892 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
ERCC8-208ENST00000497892 CRYBG1Q9Y4K1 1723 aa15.86■□□□□ 0.13
ERCC8-208ENST00000497892 AKAP12Q02952 1782 aa15.86■□□□□ 0.13
ERCC8-208ENST00000497892 ST20-MTHFSA0A0A6YYL1 179 aa15.86■□□□□ 0.13
ERCC8-208ENST00000497892 ACEP12821 1306 aa15.85■□□□□ 0.13
ERCC8-208ENST00000497892 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
ERCC8-208ENST00000497892 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
ERCC8-208ENST00000497892 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
ERCC8-208ENST00000497892 MON2Q7Z3U7 1717 aa15.83■□□□□ 0.13
ERCC8-208ENST00000497892 NRKQ7Z2Y5 1582 aa15.83■□□□□ 0.12
ERCC8-208ENST00000497892 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
ERCC8-208ENST00000497892 MEX3CQ5U5Q3 659 aaKnown RBP15.82■□□□□ 0.12
ERCC8-208ENST00000497892 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
ERCC8-208ENST00000497892 USP6P35125 1406 aa15.82■□□□□ 0.12
ERCC8-208ENST00000497892 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
ERCC8-208ENST00000497892 PUS7Q96PZ0 661 aaKnown RBP15.81■□□□□ 0.12
ERCC8-208ENST00000497892 RGS17Q9UGC6 210 aaPredicted RBP15.81■□□□□ 0.12
ERCC8-208ENST00000497892 PHRF1Q9P1Y6 1649 aaKnown RBP15.8■□□□□ 0.12
ERCC8-208ENST00000497892 CPSF1Q10570 1443 aaKnown RBP15.8■□□□□ 0.12
ERCC8-208ENST00000497892 CD163L1Q9NR16 1453 aa15.79■□□□□ 0.12
ERCC8-208ENST00000497892 SSH2Q76I76 1423 aa15.79■□□□□ 0.12
ERCC8-208ENST00000497892 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
ERCC8-208ENST00000497892 PIK3C2AO00443 1686 aa15.79■□□□□ 0.12
ERCC8-208ENST00000497892 NINLQ9Y2I6 1382 aa15.78■□□□□ 0.12
ERCC8-208ENST00000497892 PAK3O75914 559 aaPredicted RBP15.78■□□□□ 0.12
ERCC8-208ENST00000497892 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
ERCC8-208ENST00000497892 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
ERCC8-208ENST00000497892 TMF1P82094 1093 aa15.77■□□□□ 0.12
ERCC8-208ENST00000497892 MYOM1P52179 1685 aa15.76■□□□□ 0.11
ERCC8-208ENST00000497892 PLCH1Q4KWH8 1693 aa15.76■□□□□ 0.11
ERCC8-208ENST00000497892 CABLES1Q8TDN4 633 aa15.76■□□□□ 0.11
ERCC8-208ENST00000497892 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
ERCC8-208ENST00000497892 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.76■□□□□ 0.11
ERCC8-208ENST00000497892 AFF2P51816 1311 aa15.75■□□□□ 0.11
ERCC8-208ENST00000497892 EIF4G2P78344 907 aaKnown RBP eCLIP15.75■□□□□ 0.11
ERCC8-208ENST00000497892 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
ERCC8-208ENST00000497892 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
ERCC8-208ENST00000497892 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
ERCC8-208ENST00000497892 USP54Q70EL1 1684 aa15.74■□□□□ 0.11
ERCC8-208ENST00000497892 CLCN6P51797 869 aa15.74■□□□□ 0.11
ERCC8-208ENST00000497892 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
ERCC8-208ENST00000497892 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
ERCC8-208ENST00000497892 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
ERCC8-208ENST00000497892 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
ERCC8-208ENST00000497892 POTEAQ6S8J7 498 aa15.73■□□□□ 0.11
ERCC8-208ENST00000497892 ILDR2Q71H61 639 aa15.73■□□□□ 0.11
ERCC8-208ENST00000497892 TMC1Q8TDI8 760 aa15.73■□□□□ 0.11
ERCC8-208ENST00000497892 NGLY1Q96IV0 654 aa15.73■□□□□ 0.11
ERCC8-208ENST00000497892 SLIT3O75094 1523 aa15.73■□□□□ 0.11
ERCC8-208ENST00000497892 SLIT2O94813 1529 aa15.73■□□□□ 0.11
ERCC8-208ENST00000497892 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
ERCC8-208ENST00000497892 USP19O94966 1318 aa15.72■□□□□ 0.11
ERCC8-208ENST00000497892 HSPA5P11021 654 aaKnown RBP15.72■□□□□ 0.11
ERCC8-208ENST00000497892 CDCA8Q53HL2 280 aa15.72■□□□□ 0.11
ERCC8-208ENST00000497892 FNBP4Q8N3X1 1017 aaPredicted RBP15.72■□□□□ 0.11
ERCC8-208ENST00000497892 ABTB2Q8N961 1025 aa15.72■□□□□ 0.11
ERCC8-208ENST00000497892 SLC12A5Q9H2X9 1139 aa15.72■□□□□ 0.11
ERCC8-208ENST00000497892 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms