RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 ALS2Q96Q42 1657 aa23.14■■□□□ 1.29
HCLS1-212ENST00000497391 TMF1P82094 1093 aa23.14■■□□□ 1.29
HCLS1-212ENST00000497391 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
HCLS1-212ENST00000497391 USP21Q9UK80 565 aa23.14■■□□□ 1.29
HCLS1-212ENST00000497391 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
HCLS1-212ENST00000497391 ABTB2Q8N961 1025 aa23.13■■□□□ 1.29
HCLS1-212ENST00000497391 TMC1Q8TDI8 760 aa23.13■■□□□ 1.29
HCLS1-212ENST00000497391 CABLES1Q8TDN4 633 aa23.13■■□□□ 1.29
HCLS1-212ENST00000497391 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
HCLS1-212ENST00000497391 MARF1Q9Y4F3 1742 aaKnown RBP23.11■■□□□ 1.29
HCLS1-212ENST00000497391 USP6P35125 1406 aa23.11■■□□□ 1.29
HCLS1-212ENST00000497391 RXRBP28702 533 aa23.11■■□□□ 1.29
HCLS1-212ENST00000497391 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
HCLS1-212ENST00000497391 NINLQ9Y2I6 1382 aa23.11■■□□□ 1.29
HCLS1-212ENST00000497391 FNBP4Q8N3X1 1017 aaPredicted RBP23.1■■□□□ 1.29
HCLS1-212ENST00000497391 NLRP13Q86W25 1043 aa23.09■■□□□ 1.29
HCLS1-212ENST00000497391 TESK2Q96S53 571 aa23.09■■□□□ 1.29
HCLS1-212ENST00000497391 QTRT2Q9H974 415 aaKnown RBP23.09■■□□□ 1.29
HCLS1-212ENST00000497391 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
HCLS1-212ENST00000497391 TRPC5Q9UL62 973 aaPredicted RBP23.09■■□□□ 1.29
HCLS1-212ENST00000497391 ABCA3Q99758 1704 aa23.08■■□□□ 1.29
HCLS1-212ENST00000497391 KTN1Q86UP2 1357 aaKnown RBP23.08■■□□□ 1.29
HCLS1-212ENST00000497391 SOCS7O14512 581 aa23.07■■□□□ 1.28
HCLS1-212ENST00000497391 NUTM2GQ5VZR2 741 aa23.06■■□□□ 1.28
HCLS1-212ENST00000497391 RBM6P78332 1123 aaKnown RBP23.05■■□□□ 1.28
HCLS1-212ENST00000497391 EIF4G2P78344 907 aaKnown RBP eCLIP23.05■■□□□ 1.28
HCLS1-212ENST00000497391 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
HCLS1-212ENST00000497391 TTC21AQ8NDW8 1320 aa23.05■■□□□ 1.28
HCLS1-212ENST00000497391 NLRP6P59044 892 aa23.03■■□□□ 1.28
HCLS1-212ENST00000497391 CPSF1Q10570 1443 aaKnown RBP23.02■■□□□ 1.28
HCLS1-212ENST00000497391 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
HCLS1-212ENST00000497391 AKAP12Q02952 1782 aa23.01■■□□□ 1.27
HCLS1-212ENST00000497391 TTC21BQ7Z4L5 1316 aa23.01■■□□□ 1.27
HCLS1-212ENST00000497391 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
HCLS1-212ENST00000497391 CDK12Q9NYV4 1490 aaPredicted RBP23■■□□□ 1.27
HCLS1-212ENST00000497391 SLIT2O94813 1529 aa23■■□□□ 1.27
HCLS1-212ENST00000497391 SLC12A5Q9H2X9 1139 aa23■■□□□ 1.27
HCLS1-212ENST00000497391 ATRNO75882 1429 aa22.99■■□□□ 1.27
HCLS1-212ENST00000497391 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
HCLS1-212ENST00000497391 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
HCLS1-212ENST00000497391 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
HCLS1-212ENST00000497391 USP19O94966 1318 aa22.99■■□□□ 1.27
HCLS1-212ENST00000497391 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
HCLS1-212ENST00000497391 BCL9LQ86UU0 1499 aa22.98■■□□□ 1.27
HCLS1-212ENST00000497391 PLCH1Q4KWH8 1693 aa22.98■■□□□ 1.27
HCLS1-212ENST00000497391 FAM83GA6ND36 823 aa22.98■■□□□ 1.27
HCLS1-212ENST00000497391 CRYBG1Q9Y4K1 1723 aa22.98■■□□□ 1.27
HCLS1-212ENST00000497391 KIAA0232Q92628 1395 aa22.98■■□□□ 1.27
HCLS1-212ENST00000497391 EDC4Q6P2E9 1401 aaKnown RBP22.98■■□□□ 1.27
HCLS1-212ENST00000497391 SSH2Q76I76 1423 aa22.98■■□□□ 1.27
HCLS1-212ENST00000497391 MON2Q7Z3U7 1717 aa22.97■■□□□ 1.27
HCLS1-212ENST00000497391 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
HCLS1-212ENST00000497391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
HCLS1-212ENST00000497391 GCP02774 474 aa22.96■■□□□ 1.27
HCLS1-212ENST00000497391 KCNH5Q8NCM2 988 aa22.96■■□□□ 1.27
HCLS1-212ENST00000497391 BTG4Q9NY30 223 aa22.96■■□□□ 1.27
HCLS1-212ENST00000497391 A0A1W2PP64 1363 aa22.96■■□□□ 1.27
HCLS1-212ENST00000497391 NRKQ7Z2Y5 1582 aa22.95■■□□□ 1.26
HCLS1-212ENST00000497391 PIK3C2AO00443 1686 aa22.94■■□□□ 1.26
HCLS1-212ENST00000497391 CPDO75976 1380 aa22.94■■□□□ 1.26
HCLS1-212ENST00000497391 VPS72Q15906 364 aa22.94■■□□□ 1.26
HCLS1-212ENST00000497391 GJD4Q96KN9 370 aaPredicted RBP22.94■■□□□ 1.26
HCLS1-212ENST00000497391 ANKRD36BQ8N2N9 1353 aa22.93■■□□□ 1.26
HCLS1-212ENST00000497391 HSPA5P11021 654 aaKnown RBP22.93■■□□□ 1.26
HCLS1-212ENST00000497391 CD163L1Q9NR16 1453 aa22.92■■□□□ 1.26
HCLS1-212ENST00000497391 ZBTB7CA1YPR0 619 aa22.92■■□□□ 1.26
HCLS1-212ENST00000497391 EVA1CP58658 441 aa22.91■■□□□ 1.26
HCLS1-212ENST00000497391 CHRNA2Q15822 529 aa22.91■■□□□ 1.26
HCLS1-212ENST00000497391 POLR3GLQ9BT43 218 aa22.91■■□□□ 1.26
HCLS1-212ENST00000497391 SLIT3O75094 1523 aa22.91■■□□□ 1.26
HCLS1-212ENST00000497391 RGS12O14924 1447 aa22.9■■□□□ 1.26
HCLS1-212ENST00000497391 SOX12O15370 315 aa22.88■■□□□ 1.25
HCLS1-212ENST00000497391 STRN4Q9NRL3 753 aa22.88■■□□□ 1.25
HCLS1-212ENST00000497391 A0A0G2JS52 829 aa22.87■■□□□ 1.25
HCLS1-212ENST00000497391 MYT1Q01538 1121 aa22.87■■□□□ 1.25
HCLS1-212ENST00000497391 NME9Q86XW9 330 aa22.87■■□□□ 1.25
HCLS1-212ENST00000497391 USP31Q70CQ4 1352 aa22.87■■□□□ 1.25
HCLS1-212ENST00000497391 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
HCLS1-212ENST00000497391 COG3Q96JB2 828 aa22.85■■□□□ 1.25
HCLS1-212ENST00000497391 AATKQ6ZMQ8 1374 aa22.84■■□□□ 1.25
HCLS1-212ENST00000497391 GLI3P10071 1580 aa22.81■■□□□ 1.24
HCLS1-212ENST00000497391 SPATA31A5Q5VU36 1347 aa22.81■■□□□ 1.24
HCLS1-212ENST00000497391 SPATA31A7Q8IWB4 1347 aa22.81■■□□□ 1.24
HCLS1-212ENST00000497391 USP54Q70EL1 1684 aa22.81■■□□□ 1.24
HCLS1-212ENST00000497391 ARHGEF25Q86VW2 580 aa22.79■■□□□ 1.24
HCLS1-212ENST00000497391 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
HCLS1-212ENST00000497391 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
HCLS1-212ENST00000497391 ABCC6O95255 1503 aa22.78■■□□□ 1.24
HCLS1-212ENST00000497391 MYOM1P52179 1685 aa22.78■■□□□ 1.24
HCLS1-212ENST00000497391 LMO7Q8WWI1 1683 aa22.78■■□□□ 1.24
HCLS1-212ENST00000497391 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
HCLS1-212ENST00000497391 SEPT12Q8IYM1 358 aa22.78■■□□□ 1.24
HCLS1-212ENST00000497391 ZRANB1Q9UGI0 708 aa22.78■■□□□ 1.24
HCLS1-212ENST00000497391 CAMTA1Q9Y6Y1 1673 aa22.77■■□□□ 1.24
HCLS1-212ENST00000497391 NFAT5O94916 1531 aa22.77■■□□□ 1.24
HCLS1-212ENST00000497391 NSD3Q9BZ95 1437 aa22.77■■□□□ 1.24
HCLS1-212ENST00000497391 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
HCLS1-212ENST00000497391 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
HCLS1-212ENST00000497391 SPATA31A1Q5TZJ5 1347 aa22.77■■□□□ 1.24
HCLS1-212ENST00000497391 USP35Q9P2H5 1018 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms