RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 TOR4AQ9NXH8 423 aa13.8□□□□□ -0.2
TARDBP-210ENST00000496840 CTDSPL2Q05D32 466 aa13.79□□□□□ -0.2
TARDBP-210ENST00000496840 SH3BP2P78314 561 aa13.78□□□□□ -0.2
TARDBP-210ENST00000496840 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
TARDBP-210ENST00000496840 DGAT1O75907 488 aa13.77□□□□□ -0.21
TARDBP-210ENST00000496840 RFC5P40937 340 aa13.77□□□□□ -0.21
TARDBP-210ENST00000496840 CYP4X1Q8N118 509 aa13.77□□□□□ -0.21
TARDBP-210ENST00000496840 ZNF511Q8NB15 262 aa13.77□□□□□ -0.21
TARDBP-210ENST00000496840 BAP1Q92560 729 aa13.77□□□□□ -0.21
TARDBP-210ENST00000496840 ARMC2Q8NEN0 867 aa13.75□□□□□ -0.21
TARDBP-210ENST00000496840 SNIP1Q8TAD8 396 aaKnown RBP13.75□□□□□ -0.21
TARDBP-210ENST00000496840 AP1G2O75843 785 aa13.74□□□□□ -0.21
TARDBP-210ENST00000496840 LINC01559Q495D7 138 aa13.74□□□□□ -0.21
TARDBP-210ENST00000496840 PKDCCQ504Y2 493 aa13.74□□□□□ -0.21
TARDBP-210ENST00000496840 FAM187AA6NFU0 413 aa13.73□□□□□ -0.21
TARDBP-210ENST00000496840 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
TARDBP-210ENST00000496840 TRAF7Q6Q0C0 670 aa13.72□□□□□ -0.21
TARDBP-210ENST00000496840 EHBP1Q8NDI1 1231 aa13.72□□□□□ -0.21
TARDBP-210ENST00000496840 LRRN4Q8WUT4 740 aa13.72□□□□□ -0.21
TARDBP-210ENST00000496840 TTC24A2A3L6 582 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-210ENST00000496840 LCE2BO14633 110 aa13.7□□□□□ -0.22
TARDBP-210ENST00000496840 SIAH2O43255 324 aa13.7□□□□□ -0.22
TARDBP-210ENST00000496840 USP17L8P0C7I0 530 aa13.7□□□□□ -0.22
TARDBP-210ENST00000496840 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
TARDBP-210ENST00000496840 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
TARDBP-210ENST00000496840 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
TARDBP-210ENST00000496840 AVPP01185 164 aa13.66□□□□□ -0.22
TARDBP-210ENST00000496840 SMPD1P17405 629 aa13.66□□□□□ -0.22
TARDBP-210ENST00000496840 MYT1Q01538 1121 aa13.65□□□□□ -0.22
TARDBP-210ENST00000496840 MPNDQ8N594 471 aa13.65□□□□□ -0.22
TARDBP-210ENST00000496840 NR6A1Q15406 480 aa13.64□□□□□ -0.23
TARDBP-210ENST00000496840 BPHLQ86WA6 291 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-210ENST00000496840 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
TARDBP-210ENST00000496840 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
TARDBP-210ENST00000496840 J3QL48 77 aa13.63□□□□□ -0.23
TARDBP-210ENST00000496840 FKBPLQ9UIM3 349 aa13.63□□□□□ -0.23
TARDBP-210ENST00000496840 SH3BP5LQ7L8J4 393 aa13.62□□□□□ -0.23
TARDBP-210ENST00000496840 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
TARDBP-210ENST00000496840 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
TARDBP-210ENST00000496840 FAM174AQ8TBP5 190 aa13.62□□□□□ -0.23
TARDBP-210ENST00000496840 HMX1Q9NP08 348 aaPredicted RBP13.62□□□□□ -0.23
TARDBP-210ENST00000496840 ALDH1A1P00352 501 aa13.61□□□□□ -0.23
TARDBP-210ENST00000496840 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
TARDBP-210ENST00000496840 CTC1Q2NKJ3 1217 aa13.6□□□□□ -0.23
TARDBP-210ENST00000496840 C4orf48Q5BLP8 95 aa13.6□□□□□ -0.23
TARDBP-210ENST00000496840 SOCS7O14512 581 aa13.59□□□□□ -0.23
TARDBP-210ENST00000496840 SMCPP49901 116 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-210ENST00000496840 AGERQ15109 404 aa13.59□□□□□ -0.23
TARDBP-210ENST00000496840 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
TARDBP-210ENST00000496840 PNMA1Q8ND90 353 aa13.59□□□□□ -0.23
TARDBP-210ENST00000496840 C1QTNF2Q9BXJ5 285 aa13.59□□□□□ -0.23
TARDBP-210ENST00000496840 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
TARDBP-210ENST00000496840 CDK15Q96Q40 435 aa13.57□□□□□ -0.24
TARDBP-210ENST00000496840 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
TARDBP-210ENST00000496840 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
TARDBP-210ENST00000496840 AAASQ9NRG9 546 aa13.56□□□□□ -0.24
TARDBP-210ENST00000496840 WASF2Q9Y6W5 498 aa13.56□□□□□ -0.24
TARDBP-210ENST00000496840 GPSM3Q9Y4H4 160 aa13.55□□□□□ -0.24
TARDBP-210ENST00000496840 TRMT44Q8IYL2 757 aaKnown RBP13.54□□□□□ -0.24
TARDBP-210ENST00000496840 HPS1Q92902 700 aa13.53□□□□□ -0.24
TARDBP-210ENST00000496840 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
TARDBP-210ENST00000496840 AXIN1O15169 862 aa13.52□□□□□ -0.25
TARDBP-210ENST00000496840 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
TARDBP-210ENST00000496840 ST8SIA5O15466 376 aa13.51□□□□□ -0.25
TARDBP-210ENST00000496840 ADH1CP00326 375 aa13.51□□□□□ -0.25
TARDBP-210ENST00000496840 PTK2Q05397 1052 aa13.51□□□□□ -0.25
TARDBP-210ENST00000496840 ARHGAP9Q9BRR9 750 aa13.51□□□□□ -0.25
TARDBP-210ENST00000496840 MAP4K5Q9Y4K4 846 aa13.51□□□□□ -0.25
TARDBP-210ENST00000496840 ERFEQ4G0M1 354 aa13.49□□□□□ -0.25
TARDBP-210ENST00000496840 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
TARDBP-210ENST00000496840 OCSTAMPQ9BR26 566 aa13.48□□□□□ -0.25
TARDBP-210ENST00000496840 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
TARDBP-210ENST00000496840 APBB1O00213 710 aa13.47□□□□□ -0.25
TARDBP-210ENST00000496840 NR5A1Q13285 461 aa13.47□□□□□ -0.25
TARDBP-210ENST00000496840 NNTQ13423 1086 aa13.46□□□□□ -0.25
TARDBP-210ENST00000496840 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
TARDBP-210ENST00000496840 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
TARDBP-210ENST00000496840 SNRKQ9NRH2 765 aa13.46□□□□□ -0.25
TARDBP-210ENST00000496840 GRM5P41594 1212 aa13.45□□□□□ -0.26
TARDBP-210ENST00000496840 CDV3Q9UKY7 258 aaKnown RBP13.45□□□□□ -0.26
TARDBP-210ENST00000496840 VASH1Q7L8A9 365 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-210ENST00000496840 ADAM32Q8TC27 787 aa13.42□□□□□ -0.26
TARDBP-210ENST00000496840 SLC10A4Q96EP9 437 aa13.42□□□□□ -0.26
TARDBP-210ENST00000496840 DACH1Q9UI36 760 aa13.42□□□□□ -0.26
TARDBP-210ENST00000496840 NDUFB9Q9Y6M9 179 aa13.42□□□□□ -0.26
TARDBP-210ENST00000496840 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
TARDBP-210ENST00000496840 KLF16Q9BXK1 252 aaPredicted RBP13.4□□□□□ -0.26
TARDBP-210ENST00000496840 CAPN5O15484 640 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-210ENST00000496840 NR3C2P08235 984 aa13.39□□□□□ -0.27
TARDBP-210ENST00000496840 FSHRP23945 695 aa13.39□□□□□ -0.27
TARDBP-210ENST00000496840 ZBBXA8MT70 800 aa13.38□□□□□ -0.27
TARDBP-210ENST00000496840 GPR37L1O60883 481 aa13.38□□□□□ -0.27
TARDBP-210ENST00000496840 TIMP2P16035 220 aa13.38□□□□□ -0.27
TARDBP-210ENST00000496840 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
TARDBP-210ENST00000496840 ATP13A2Q9NQ11 1180 aa13.38□□□□□ -0.27
TARDBP-210ENST00000496840 WDR4P57081 412 aaKnown RBP13.37□□□□□ -0.27
TARDBP-210ENST00000496840 FBXO45P0C2W1 286 aa13.35□□□□□ -0.27
TARDBP-210ENST00000496840 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-210ENST00000496840 POTECB2RU33 542 aa13.34□□□□□ -0.27
TARDBP-210ENST00000496840 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms