RNA–Protein interactions for RNA: ENST00000496792.3

NRXN1-219, Transcript of neurexin 1, human

TSL 2

Gene NRXN1, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-219	ENST00000496792	NUTM2E	B1AL46	878 aa	Predicted RBP	33.31	■■■□□ 2.92
NRXN1-219	ENST00000496792	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.31	■■■□□ 2.92
NRXN1-219	ENST00000496792	MED1	Q15648	1581 aa	Predicted RBP	33.3	■■■□□ 2.92
NRXN1-219	ENST00000496792	MEX3C	Q5U5Q3	659 aa	Known RBP	33.27	■■■□□ 2.92
NRXN1-219	ENST00000496792	ALS2	Q96Q42	1657 aa		33.26	■■■□□ 2.92
NRXN1-219	ENST00000496792	CD163L1	Q9NR16	1453 aa		33.26	■■■□□ 2.92
NRXN1-219	ENST00000496792	ABTB2	Q8N961	1025 aa		33.26	■■■□□ 2.91
NRXN1-219	ENST00000496792	SSH2	Q76I76	1423 aa		33.26	■■■□□ 2.91
NRXN1-219	ENST00000496792	TTC21A	Q8NDW8	1320 aa		33.26	■■■□□ 2.91
NRXN1-219	ENST00000496792	ANKRD36B	Q8N2N9	1353 aa		33.25	■■■□□ 2.91
NRXN1-219	ENST00000496792	AKAP12	Q02952	1782 aa		33.25	■■■□□ 2.91
NRXN1-219	ENST00000496792	HAP1	P54257	671 aa	Predicted RBP	33.25	■■■□□ 2.91
NRXN1-219	ENST00000496792	LRP6	O75581	1613 aa		33.24	■■■□□ 2.91
NRXN1-219	ENST00000496792		A0A1W2PP64	1363 aa		33.24	■■■□□ 2.91
NRXN1-219	ENST00000496792	TTC21B	Q7Z4L5	1316 aa		33.24	■■■□□ 2.91
NRXN1-219	ENST00000496792	EDC4	Q6P2E9	1401 aa	Known RBP	33.22	■■■□□ 2.91
NRXN1-219	ENST00000496792	POLR3GL	Q9BT43	218 aa		33.22	■■■□□ 2.91
NRXN1-219	ENST00000496792	NLRP13	Q86W25	1043 aa		33.21	■■■□□ 2.91
NRXN1-219	ENST00000496792	PHF23	Q9BUL5	403 aa	Predicted RBP	33.21	■■■□□ 2.91
NRXN1-219	ENST00000496792	MON2	Q7Z3U7	1717 aa		33.19	■■■□□ 2.9
NRXN1-219	ENST00000496792	ADAMTS2	O95450	1211 aa		33.17	■■■□□ 2.9
NRXN1-219	ENST00000496792	CABLES1	Q8TDN4	633 aa		33.16	■■■□□ 2.9
NRXN1-219	ENST00000496792	NRK	Q7Z2Y5	1582 aa		33.16	■■■□□ 2.9
NRXN1-219	ENST00000496792	NLRP6	P59044	892 aa		33.15	■■■□□ 2.9
NRXN1-219	ENST00000496792	NUTM2G	Q5VZR2	741 aa		33.15	■■■□□ 2.9
NRXN1-219	ENST00000496792	C11orf95	C9JLR9	678 aa	Predicted RBP	33.14	■■■□□ 2.9
NRXN1-219	ENST00000496792	PLEKHG5	O94827	1062 aa		33.14	■■■□□ 2.9
NRXN1-219	ENST00000496792	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.14	■■■□□ 2.9
NRXN1-219	ENST00000496792	KIF7	Q2M1P5	1343 aa		33.13	■■■□□ 2.89
NRXN1-219	ENST00000496792	USP19	O94966	1318 aa		33.12	■■■□□ 2.89
NRXN1-219	ENST00000496792	MYOM1	P52179	1685 aa		33.12	■■■□□ 2.89
NRXN1-219	ENST00000496792	NGLY1	Q96IV0	654 aa		33.11	■■■□□ 2.89
NRXN1-219	ENST00000496792	C8orf37	Q96NL8	207 aa		33.11	■■■□□ 2.89
NRXN1-219	ENST00000496792	ABCA3	Q99758	1704 aa		33.08	■■■□□ 2.89
NRXN1-219	ENST00000496792	USP31	Q70CQ4	1352 aa		33.08	■■■□□ 2.89
NRXN1-219	ENST00000496792	PIK3C2A	O00443	1686 aa		33.07	■■■□□ 2.89
NRXN1-219	ENST00000496792	ZNF772	Q68DY9	489 aa	Predicted RBP	33.06	■■■□□ 2.88
NRXN1-219	ENST00000496792	NME9	Q86XW9	330 aa		33.05	■■■□□ 2.88
NRXN1-219	ENST00000496792	KCNH5	Q8NCM2	988 aa		33.05	■■■□□ 2.88
NRXN1-219	ENST00000496792	CCDC7	Q96M83	1385 aa		33.05	■■■□□ 2.88
NRXN1-219	ENST00000496792	GC	P02774	474 aa		33.04	■■■□□ 2.88
NRXN1-219	ENST00000496792	CRYBG1	Q9Y4K1	1723 aa		33.04	■■■□□ 2.88
NRXN1-219	ENST00000496792	AFF2	P51816	1311 aa		33.03	■■■□□ 2.88
NRXN1-219	ENST00000496792	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.02	■■■□□ 2.88
NRXN1-219	ENST00000496792	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.02	■■■□□ 2.88
NRXN1-219	ENST00000496792	MARF1	Q9Y4F3	1742 aa	Known RBP	33.02	■■■□□ 2.88
NRXN1-219	ENST00000496792	SLIT3	O75094	1523 aa		33.02	■■■□□ 2.88
NRXN1-219	ENST00000496792	CARD14	Q9BXL6	1004 aa		33.01	■■■□□ 2.87
NRXN1-219	ENST00000496792	PANK3	Q9H999	370 aa		33.01	■■■□□ 2.87
NRXN1-219	ENST00000496792	NSD3	Q9BZ95	1437 aa		33.01	■■■□□ 2.87
NRXN1-219	ENST00000496792	PRDM11	Q9NQV5	511 aa		33	■■■□□ 2.87
NRXN1-219	ENST00000496792	WASHC2A	Q641Q2	1341 aa		33	■■■□□ 2.87
NRXN1-219	ENST00000496792	CPD	O75976	1380 aa		32.99	■■■□□ 2.87
NRXN1-219	ENST00000496792	COG3	Q96JB2	828 aa		32.99	■■■□□ 2.87
NRXN1-219	ENST00000496792	CGNL1	Q0VF96	1302 aa		32.98	■■■□□ 2.87
NRXN1-219	ENST00000496792	USP54	Q70EL1	1684 aa		32.97	■■■□□ 2.87
NRXN1-219	ENST00000496792	KIAA0232	Q92628	1395 aa		32.97	■■■□□ 2.87
NRXN1-219	ENST00000496792	ZC3H6	P61129	1189 aa	Known RBP	32.97	■■■□□ 2.87
NRXN1-219	ENST00000496792	USP21	Q9UK80	565 aa		32.97	■■■□□ 2.87
NRXN1-219	ENST00000496792	FAM83G	A6ND36	823 aa		32.96	■■■□□ 2.87
NRXN1-219	ENST00000496792	RGS17	Q9UGC6	210 aa	Predicted RBP	32.96	■■■□□ 2.87
NRXN1-219	ENST00000496792	OVOS2	A0A0J9YW53	1432 aa		32.95	■■■□□ 2.87
NRXN1-219	ENST00000496792	OVOS2	Q6IE36	1432 aa		32.95	■■■□□ 2.87
NRXN1-219	ENST00000496792	FYB1	O15117	783 aa		32.95	■■■□□ 2.87
NRXN1-219	ENST00000496792	SLIT2	O94813	1529 aa		32.94	■■■□□ 2.86
NRXN1-219	ENST00000496792	ZRANB1	Q9UGI0	708 aa		32.94	■■■□□ 2.86
NRXN1-219	ENST00000496792	COL14A1	Q05707	1796 aa	Known RBP	32.92	■■■□□ 2.86
NRXN1-219	ENST00000496792	UNC5CL	Q8IV45	518 aa		32.91	■■■□□ 2.86
NRXN1-219	ENST00000496792	GGNBP2	Q9H3C7	697 aa		32.9	■■■□□ 2.86
NRXN1-219	ENST00000496792	KNSTRN	Q9Y448	316 aa		32.9	■■■□□ 2.86
NRXN1-219	ENST00000496792	TRPC5	Q9UL62	973 aa	Predicted RBP	32.89	■■■□□ 2.86
NRXN1-219	ENST00000496792	BCL9L	Q86UU0	1499 aa		32.88	■■■□□ 2.85
NRXN1-219	ENST00000496792	SOX12	O15370	315 aa		32.88	■■■□□ 2.85
NRXN1-219	ENST00000496792	QTRT2	Q9H974	415 aa	Known RBP	32.87	■■■□□ 2.85
NRXN1-219	ENST00000496792	BTG4	Q9NY30	223 aa		32.87	■■■□□ 2.85
NRXN1-219	ENST00000496792	NFAT5	O94916	1531 aa		32.87	■■■□□ 2.85
NRXN1-219	ENST00000496792	NSD2	O96028	1365 aa		32.86	■■■□□ 2.85
NRXN1-219	ENST00000496792	AATK	Q6ZMQ8	1374 aa		32.86	■■■□□ 2.85
NRXN1-219	ENST00000496792	NWD2	Q9ULI1	1742 aa		32.86	■■■□□ 2.85
NRXN1-219	ENST00000496792	CHRNA2	Q15822	529 aa		32.86	■■■□□ 2.85
NRXN1-219	ENST00000496792	ARHGEF25	Q86VW2	580 aa		32.86	■■■□□ 2.85
NRXN1-219	ENST00000496792	PLCH1	Q4KWH8	1693 aa		32.85	■■■□□ 2.85
NRXN1-219	ENST00000496792	KIF20B	Q96Q89	1820 aa		32.84	■■■□□ 2.85
NRXN1-219	ENST00000496792	ZBTB7C	A1YPR0	619 aa		32.84	■■■□□ 2.85
NRXN1-219	ENST00000496792	POTEA	Q6S8J7	498 aa		32.84	■■■□□ 2.85
NRXN1-219	ENST00000496792	ATRN	O75882	1429 aa		32.82	■■■□□ 2.84
NRXN1-219	ENST00000496792	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.82	■■■□□ 2.84
NRXN1-219	ENST00000496792	ABCC6	O95255	1503 aa		32.8	■■■□□ 2.84
NRXN1-219	ENST00000496792	RXRB	P28702	533 aa		32.79	■■■□□ 2.84
NRXN1-219	ENST00000496792	RBM6	P78332	1123 aa	Known RBP	32.79	■■■□□ 2.84
NRXN1-219	ENST00000496792	VPS72	Q15906	364 aa		32.79	■■■□□ 2.84
NRXN1-219	ENST00000496792	EVA1C	P58658	441 aa		32.78	■■■□□ 2.84
NRXN1-219	ENST00000496792	LMO7	Q8WWI1	1683 aa		32.76	■■■□□ 2.84
NRXN1-219	ENST00000496792	PER1	O15534	1290 aa	Predicted RBP	32.76	■■■□□ 2.83
NRXN1-219	ENST00000496792	GJD4	Q96KN9	370 aa	Predicted RBP	32.74	■■■□□ 2.83
NRXN1-219	ENST00000496792	CCDC9	Q9Y3X0	531 aa	Known RBP	32.74	■■■□□ 2.83
NRXN1-219	ENST00000496792	CAMTA1	Q9Y6Y1	1673 aa		32.74	■■■□□ 2.83
NRXN1-219	ENST00000496792	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.73	■■■□□ 2.83
NRXN1-219	ENST00000496792	NRAP	Q86VF7	1730 aa		32.73	■■■□□ 2.83
NRXN1-219	ENST00000496792	STRN4	Q9NRL3	753 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms