RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 NPHP1O15259 732 aa16.98■□□□□ 0.31
PKD1-222ENST00000496574 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
PKD1-222ENST00000496574 RRAGDQ9NQL2 400 aaPredicted RBP16.98■□□□□ 0.31
PKD1-222ENST00000496574 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
PKD1-222ENST00000496574 GNAI3P08754 354 aa16.98■□□□□ 0.31
PKD1-222ENST00000496574 NGDNQ8NEJ9 315 aaKnown RBP16.98■□□□□ 0.31
PKD1-222ENST00000496574 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
PKD1-222ENST00000496574 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
PKD1-222ENST00000496574 DYNC1I1O14576 645 aa16.97■□□□□ 0.31
PKD1-222ENST00000496574 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
PKD1-222ENST00000496574 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
PKD1-222ENST00000496574 BAG4O95429 457 aaKnown RBP16.97■□□□□ 0.31
PKD1-222ENST00000496574 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
PKD1-222ENST00000496574 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
PKD1-222ENST00000496574 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
PKD1-222ENST00000496574 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
PKD1-222ENST00000496574 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
PKD1-222ENST00000496574 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
PKD1-222ENST00000496574 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.31
PKD1-222ENST00000496574 HSP90B2PQ58FF3 399 aa16.96■□□□□ 0.31
PKD1-222ENST00000496574 CPLX2Q6PUV4 134 aaKnown RBP16.96■□□□□ 0.31
PKD1-222ENST00000496574 CNTROBQ8N137 903 aa16.96■□□□□ 0.31
PKD1-222ENST00000496574 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
PKD1-222ENST00000496574 TAF3Q5VWG9 929 aa16.95■□□□□ 0.3
PKD1-222ENST00000496574 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
PKD1-222ENST00000496574 PES1O00541 588 aaKnown RBP16.95■□□□□ 0.3
PKD1-222ENST00000496574 CPLX1O14810 134 aa16.95■□□□□ 0.3
PKD1-222ENST00000496574 PSMA5P28066 241 aa16.95■□□□□ 0.3
PKD1-222ENST00000496574 KINO60870 393 aaKnown RBP16.94■□□□□ 0.3
PKD1-222ENST00000496574 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
PKD1-222ENST00000496574 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
PKD1-222ENST00000496574 RASSF8Q8NHQ8 419 aa16.94■□□□□ 0.3
PKD1-222ENST00000496574 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
PKD1-222ENST00000496574 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
PKD1-222ENST00000496574 KRT85P78386 507 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 CCDC70Q6NSX1 233 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 TMPOP42166 694 aaKnown RBP16.93■□□□□ 0.3
PKD1-222ENST00000496574 ABCC5O15440 1437 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 G3BP1Q13283 466 aaKnown RBP eCLIP16.93■□□□□ 0.3
PKD1-222ENST00000496574 ACBD3Q9H3P7 528 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 FOSBP53539 338 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
PKD1-222ENST00000496574 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
PKD1-222ENST00000496574 TEFQ10587 303 aa16.92■□□□□ 0.3
PKD1-222ENST00000496574 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
PKD1-222ENST00000496574 AEBP1Q8IUX7 1158 aa16.92■□□□□ 0.3
PKD1-222ENST00000496574 GNAI2P04899 355 aa16.92■□□□□ 0.3
PKD1-222ENST00000496574 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
PKD1-222ENST00000496574 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
PKD1-222ENST00000496574 RPAP2Q8IXW5 612 aaPredicted RBP16.91■□□□□ 0.3
PKD1-222ENST00000496574 CLASRPQ8N2M8 674 aaKnown RBP16.91■□□□□ 0.3
PKD1-222ENST00000496574 TOMM22Q9NS69 142 aa16.91■□□□□ 0.3
PKD1-222ENST00000496574 TRIM27P14373 513 aa16.91■□□□□ 0.3
PKD1-222ENST00000496574 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
PKD1-222ENST00000496574 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
PKD1-222ENST00000496574 SYNE3Q6ZMZ3 975 aa16.9■□□□□ 0.3
PKD1-222ENST00000496574 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
PKD1-222ENST00000496574 SMC2O95347 1197 aa16.9■□□□□ 0.3
PKD1-222ENST00000496574 IPO7O95373 1038 aaKnown RBP16.9■□□□□ 0.3
PKD1-222ENST00000496574 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
PKD1-222ENST00000496574 HOOK1Q9UJC3 728 aaKnown RBP16.9■□□□□ 0.3
PKD1-222ENST00000496574 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
PKD1-222ENST00000496574 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
PKD1-222ENST00000496574 SEC24BO95487 1268 aa16.89■□□□□ 0.29
PKD1-222ENST00000496574 NUP62CLQ9H1M0 184 aa16.89■□□□□ 0.29
PKD1-222ENST00000496574 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.29
PKD1-222ENST00000496574 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
PKD1-222ENST00000496574 CCP110O43303 1012 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 TRIM29Q14134 588 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 ZSCAN23Q3MJ62 389 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 DHX29Q7Z478 1369 aaKnown RBP16.88■□□□□ 0.29
PKD1-222ENST00000496574 OFD1O75665 1012 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 CCDC183Q5T5S1 534 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
PKD1-222ENST00000496574 PRIMPOLQ96LW4 560 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
PKD1-222ENST00000496574 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
PKD1-222ENST00000496574 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
PKD1-222ENST00000496574 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
PKD1-222ENST00000496574 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
PKD1-222ENST00000496574 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
PKD1-222ENST00000496574 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
PKD1-222ENST00000496574 PPP4R3BQ5MIZ7 849 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 ZKSCAN5Q9Y2L8 839 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 NSD3Q9BZ95 1437 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 ALDH1L2Q3SY69 923 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 SNX21Q969T3 373 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
PKD1-222ENST00000496574 ERICH4A6NGS2 130 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
PKD1-222ENST00000496574 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 PDILTQ8N807 584 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
PKD1-222ENST00000496574 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
PKD1-222ENST00000496574 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms