RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 POTEAQ6S8J7 498 aa31.91■■■□□ 2.7
CHRD-217ENST00000496527 ALS2Q96Q42 1657 aa31.9■■■□□ 2.7
CHRD-217ENST00000496527 PUS7Q96PZ0 661 aaKnown RBP31.9■■■□□ 2.7
CHRD-217ENST00000496527 ZNF692Q9BU19 519 aaPredicted RBP31.88■■■□□ 2.69
CHRD-217ENST00000496527 BRD4O60885 1362 aaPredicted RBP31.87■■■□□ 2.69
CHRD-217ENST00000496527 TMF1P82094 1093 aa31.87■■■□□ 2.69
CHRD-217ENST00000496527 TMC1Q8TDI8 760 aa31.87■■■□□ 2.69
CHRD-217ENST00000496527 USP6P35125 1406 aa31.85■■■□□ 2.69
CHRD-217ENST00000496527 ABTB2Q8N961 1025 aa31.85■■■□□ 2.69
CHRD-217ENST00000496527 NUTM2GQ5VZR2 741 aa31.84■■■□□ 2.69
CHRD-217ENST00000496527 FNBP4Q8N3X1 1017 aaPredicted RBP31.82■■■□□ 2.68
CHRD-217ENST00000496527 MARF1Q9Y4F3 1742 aaKnown RBP31.81■■■□□ 2.68
CHRD-217ENST00000496527 SLC12A5Q9H2X9 1139 aa31.81■■■□□ 2.68
CHRD-217ENST00000496527 USP21Q9UK80 565 aa31.81■■■□□ 2.68
CHRD-217ENST00000496527 EIF4G2P78344 907 aaKnown RBP eCLIP31.8■■■□□ 2.68
CHRD-217ENST00000496527 CPSF1Q10570 1443 aaKnown RBP31.8■■■□□ 2.68
CHRD-217ENST00000496527 CDCA8Q53HL2 280 aa31.79■■■□□ 2.68
CHRD-217ENST00000496527 ABCA3Q99758 1704 aa31.79■■■□□ 2.68
CHRD-217ENST00000496527 KTN1Q86UP2 1357 aaKnown RBP31.79■■■□□ 2.68
CHRD-217ENST00000496527 HDGFL2Q7Z4V5 671 aaPredicted RBP31.78■■■□□ 2.68
CHRD-217ENST00000496527 NLRP13Q86W25 1043 aa31.77■■■□□ 2.68
CHRD-217ENST00000496527 QTRT2Q9H974 415 aaKnown RBP31.77■■■□□ 2.68
CHRD-217ENST00000496527 SSH2Q76I76 1423 aa31.76■■■□□ 2.68
CHRD-217ENST00000496527 TERF2IPQ9NYB0 399 aa31.76■■■□□ 2.67
CHRD-217ENST00000496527 AKAP12Q02952 1782 aa31.76■■■□□ 2.67
CHRD-217ENST00000496527 TTC21BQ7Z4L5 1316 aa31.75■■■□□ 2.67
CHRD-217ENST00000496527 NINLQ9Y2I6 1382 aa31.75■■■□□ 2.67
CHRD-217ENST00000496527 HSPA5P11021 654 aaKnown RBP31.74■■■□□ 2.67
CHRD-217ENST00000496527 RXRBP28702 533 aa31.73■■■□□ 2.67
CHRD-217ENST00000496527 TTC21AQ8NDW8 1320 aa31.73■■■□□ 2.67
CHRD-217ENST00000496527 NLRP6P59044 892 aa31.72■■■□□ 2.67
CHRD-217ENST00000496527 TRPC5Q9UL62 973 aaPredicted RBP31.72■■■□□ 2.67
CHRD-217ENST00000496527 CD163L1Q9NR16 1453 aa31.72■■■□□ 2.67
CHRD-217ENST00000496527 FAM83GA6ND36 823 aa31.71■■■□□ 2.67
CHRD-217ENST00000496527 CRYBG1Q9Y4K1 1723 aa31.71■■■□□ 2.67
CHRD-217ENST00000496527 BCL9LQ86UU0 1499 aa31.7■■■□□ 2.66
CHRD-217ENST00000496527 USP19O94966 1318 aa31.7■■■□□ 2.66
CHRD-217ENST00000496527 SLIT2O94813 1529 aa31.7■■■□□ 2.66
CHRD-217ENST00000496527 UNC5CLQ8IV45 518 aa31.69■■■□□ 2.66
CHRD-217ENST00000496527 PRDM11Q9NQV5 511 aa31.68■■■□□ 2.66
CHRD-217ENST00000496527 A0A1W2PP64 1363 aa31.68■■■□□ 2.66
CHRD-217ENST00000496527 MON2Q7Z3U7 1717 aa31.67■■■□□ 2.66
CHRD-217ENST00000496527 RBM6P78332 1123 aaKnown RBP31.67■■■□□ 2.66
CHRD-217ENST00000496527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.67■■■□□ 2.66
CHRD-217ENST00000496527 PHRF1Q9P1Y6 1649 aaKnown RBP31.67■■■□□ 2.66
CHRD-217ENST00000496527 ZC3H6P61129 1189 aaKnown RBP31.66■■■□□ 2.66
CHRD-217ENST00000496527 GCP02774 474 aa31.65■■■□□ 2.66
CHRD-217ENST00000496527 KIAA0232Q92628 1395 aa31.65■■■□□ 2.66
CHRD-217ENST00000496527 ATRNO75882 1429 aa31.65■■■□□ 2.66
CHRD-217ENST00000496527 NRKQ7Z2Y5 1582 aa31.64■■■□□ 2.66
CHRD-217ENST00000496527 EDC4Q6P2E9 1401 aaKnown RBP31.64■■■□□ 2.66
CHRD-217ENST00000496527 PIK3C2AO00443 1686 aa31.64■■■□□ 2.65
CHRD-217ENST00000496527 SOCS7O14512 581 aa31.63■■■□□ 2.65
CHRD-217ENST00000496527 BTG4Q9NY30 223 aa31.62■■■□□ 2.65
CHRD-217ENST00000496527 COL14A1Q05707 1796 aaKnown RBP31.61■■■□□ 2.65
CHRD-217ENST00000496527 PLCH1Q4KWH8 1693 aa31.61■■■□□ 2.65
CHRD-217ENST00000496527 ANKRD36BQ8N2N9 1353 aa31.61■■■□□ 2.65
CHRD-217ENST00000496527 CHRNA2Q15822 529 aa31.6■■■□□ 2.65
CHRD-217ENST00000496527 NWD2Q9ULI1 1742 aa31.6■■■□□ 2.65
CHRD-217ENST00000496527 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.59■■■□□ 2.65
CHRD-217ENST00000496527 NME9Q86XW9 330 aa31.59■■■□□ 2.65
CHRD-217ENST00000496527 POLR3GLQ9BT43 218 aa31.59■■■□□ 2.65
CHRD-217ENST00000496527 GJD4Q96KN9 370 aaPredicted RBP31.58■■■□□ 2.65
CHRD-217ENST00000496527 CPDO75976 1380 aa31.57■■■□□ 2.64
CHRD-217ENST00000496527 SLIT3O75094 1523 aa31.57■■■□□ 2.64
CHRD-217ENST00000496527 CDK12Q9NYV4 1490 aaPredicted RBP31.57■■■□□ 2.64
CHRD-217ENST00000496527 VPS72Q15906 364 aa31.56■■■□□ 2.64
CHRD-217ENST00000496527 KCNH5Q8NCM2 988 aa31.56■■■□□ 2.64
CHRD-217ENST00000496527 CCDC9Q9Y3X0 531 aaKnown RBP31.56■■■□□ 2.64
CHRD-217ENST00000496527 ZRANB1Q9UGI0 708 aa31.55■■■□□ 2.64
CHRD-217ENST00000496527 USP31Q70CQ4 1352 aa31.55■■■□□ 2.64
CHRD-217ENST00000496527 ZBTB7CA1YPR0 619 aa31.53■■■□□ 2.64
CHRD-217ENST00000496527 SOX12O15370 315 aa31.52■■■□□ 2.64
CHRD-217ENST00000496527 NRAPQ86VF7 1730 aa31.49■■■□□ 2.63
CHRD-217ENST00000496527 RGS12O14924 1447 aa31.49■■■□□ 2.63
CHRD-217ENST00000496527 MYOM1P52179 1685 aa31.48■■■□□ 2.63
CHRD-217ENST00000496527 EVA1CP58658 441 aa31.48■■■□□ 2.63
CHRD-217ENST00000496527 STRN4Q9NRL3 753 aa31.47■■■□□ 2.63
CHRD-217ENST00000496527 AATKQ6ZMQ8 1374 aa31.45■■■□□ 2.63
CHRD-217ENST00000496527 C11orf95C9JLR9 678 aaPredicted RBP31.45■■■□□ 2.63
CHRD-217ENST00000496527 ARHGEF25Q86VW2 580 aa31.45■■■□□ 2.63
CHRD-217ENST00000496527 COG3Q96JB2 828 aa31.45■■■□□ 2.63
CHRD-217ENST00000496527 USP54Q70EL1 1684 aa31.44■■■□□ 2.62
CHRD-217ENST00000496527 GLI3P10071 1580 aa31.44■■■□□ 2.62
CHRD-217ENST00000496527 OVOS2A0A0J9YW53 1432 aa31.43■■■□□ 2.62
CHRD-217ENST00000496527 OVOS2Q6IE36 1432 aa31.43■■■□□ 2.62
CHRD-217ENST00000496527 CARD14Q9BXL6 1004 aa31.43■■■□□ 2.62
CHRD-217ENST00000496527 CAMTA1Q9Y6Y1 1673 aa31.43■■■□□ 2.62
CHRD-217ENST00000496527 NFAT5O94916 1531 aa31.42■■■□□ 2.62
CHRD-217ENST00000496527 LMO7Q8WWI1 1683 aa31.41■■■□□ 2.62
CHRD-217ENST00000496527 FYB1O15117 783 aa31.41■■■□□ 2.62
CHRD-217ENST00000496527 SPATA31A5Q5VU36 1347 aa31.41■■■□□ 2.62
CHRD-217ENST00000496527 SPATA31A7Q8IWB4 1347 aa31.41■■■□□ 2.62
CHRD-217ENST00000496527 NSD3Q9BZ95 1437 aa31.4■■■□□ 2.62
CHRD-217ENST00000496527 GGNBP2Q9H3C7 697 aa31.39■■■□□ 2.62
CHRD-217ENST00000496527 LARP1Q6PKG0 1096 aaKnown RBP31.37■■■□□ 2.61
CHRD-217ENST00000496527 COL5A2P05997 1499 aaPredicted RBP31.36■■■□□ 2.61
CHRD-217ENST00000496527 SPATA31A1Q5TZJ5 1347 aa31.36■■■□□ 2.61
CHRD-217ENST00000496527 ONECUT3O60422 494 aaPredicted RBP31.36■■■□□ 2.61
CHRD-217ENST00000496527 AXIN2Q9Y2T1 843 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms