RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 NSD3Q9BZ95 1437 aa25.31■■□□□ 1.64
TSSC4-210ENST00000496468 KRT28Q7Z3Y7 464 aa25.31■■□□□ 1.64
TSSC4-210ENST00000496468 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
TSSC4-210ENST00000496468 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
TSSC4-210ENST00000496468 KIF20BQ96Q89 1820 aa25.29■■□□□ 1.64
TSSC4-210ENST00000496468 PIK3C2AO00443 1686 aa25.29■■□□□ 1.64
TSSC4-210ENST00000496468 PANK3Q9H999 370 aa25.28■■□□□ 1.64
TSSC4-210ENST00000496468 PAK3O75914 559 aaPredicted RBP25.26■■□□□ 1.63
TSSC4-210ENST00000496468 TTC21BQ7Z4L5 1316 aa25.25■■□□□ 1.63
TSSC4-210ENST00000496468 TTC21AQ8NDW8 1320 aa25.25■■□□□ 1.63
TSSC4-210ENST00000496468 SHPRHQ149N8 1683 aa25.25■■□□□ 1.63
TSSC4-210ENST00000496468 MED1Q15648 1581 aaPredicted RBP25.24■■□□□ 1.63
TSSC4-210ENST00000496468 ARHGEF10O15013 1369 aa25.24■■□□□ 1.63
TSSC4-210ENST00000496468 HSPA1LP34931 641 aa25.24■■□□□ 1.63
TSSC4-210ENST00000496468 USP54Q70EL1 1684 aa25.23■■□□□ 1.63
TSSC4-210ENST00000496468 SPATA31A3Q5VYP0 1347 aa25.23■■□□□ 1.63
TSSC4-210ENST00000496468 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
TSSC4-210ENST00000496468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.22■■□□□ 1.63
TSSC4-210ENST00000496468 LRRC59Q96AG4 307 aaKnown RBP25.21■■□□□ 1.63
TSSC4-210ENST00000496468 CARD14Q9BXL6 1004 aa25.21■■□□□ 1.63
TSSC4-210ENST00000496468 ABCA3Q99758 1704 aa25.2■■□□□ 1.63
TSSC4-210ENST00000496468 ANKRD26Q9UPS8 1709 aa25.2■■□□□ 1.63
TSSC4-210ENST00000496468 LMOD2Q6P5Q4 547 aa25.2■■□□□ 1.62
TSSC4-210ENST00000496468 MARF1Q9Y4F3 1742 aaKnown RBP25.2■■□□□ 1.62
TSSC4-210ENST00000496468 PNPLA6Q8IY17 1366 aa25.19■■□□□ 1.62
TSSC4-210ENST00000496468 DDX10Q13206 875 aaKnown RBP25.19■■□□□ 1.62
TSSC4-210ENST00000496468 CRYBG1Q9Y4K1 1723 aa25.19■■□□□ 1.62
TSSC4-210ENST00000496468 PHRF1Q9P1Y6 1649 aaKnown RBP25.19■■□□□ 1.62
TSSC4-210ENST00000496468 JCADQ9P266 1359 aa25.18■■□□□ 1.62
TSSC4-210ENST00000496468 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
TSSC4-210ENST00000496468 ABTB2Q8N961 1025 aa25.17■■□□□ 1.62
TSSC4-210ENST00000496468 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
TSSC4-210ENST00000496468 OVOS2A0A0J9YW53 1432 aa25.16■■□□□ 1.62
TSSC4-210ENST00000496468 OVOS2Q6IE36 1432 aa25.16■■□□□ 1.62
TSSC4-210ENST00000496468 NME9Q86XW9 330 aa25.16■■□□□ 1.62
TSSC4-210ENST00000496468 NSD2O96028 1365 aa25.16■■□□□ 1.62
TSSC4-210ENST00000496468 SLIT3O75094 1523 aa25.13■■□□□ 1.61
TSSC4-210ENST00000496468 NUTM2GQ5VZR2 741 aa25.13■■□□□ 1.61
TSSC4-210ENST00000496468 USP31Q70CQ4 1352 aa25.13■■□□□ 1.61
TSSC4-210ENST00000496468 PER1O15534 1290 aaPredicted RBP25.11■■□□□ 1.61
TSSC4-210ENST00000496468 NLRP6P59044 892 aa25.11■■□□□ 1.61
TSSC4-210ENST00000496468 USP19O94966 1318 aa25.11■■□□□ 1.61
TSSC4-210ENST00000496468 NLRP13Q86W25 1043 aa25.1■■□□□ 1.61
TSSC4-210ENST00000496468 FYB1O15117 783 aa25.09■■□□□ 1.61
TSSC4-210ENST00000496468 AMER1Q5JTC6 1135 aaPredicted RBP25.09■■□□□ 1.61
TSSC4-210ENST00000496468 COG3Q96JB2 828 aa25.09■■□□□ 1.61
TSSC4-210ENST00000496468 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
TSSC4-210ENST00000496468 NPC1L1Q9UHC9 1359 aa25.08■■□□□ 1.61
TSSC4-210ENST00000496468 PLEKHG5O94827 1062 aa25.08■■□□□ 1.61
TSSC4-210ENST00000496468 ZRANB1Q9UGI0 708 aa25.08■■□□□ 1.61
TSSC4-210ENST00000496468 NFAT5O94916 1531 aa25.07■■□□□ 1.6
TSSC4-210ENST00000496468 SPATA31A6Q5VVP1 1343 aa25.06■■□□□ 1.6
TSSC4-210ENST00000496468 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
TSSC4-210ENST00000496468 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
TSSC4-210ENST00000496468 CABLES1Q8TDN4 633 aa25.03■■□□□ 1.6
TSSC4-210ENST00000496468 LRP6O75581 1613 aa25.02■■□□□ 1.6
TSSC4-210ENST00000496468 CNGB1Q14028 1251 aaPredicted RBP25.01■■□□□ 1.59
TSSC4-210ENST00000496468 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
TSSC4-210ENST00000496468 LTN1O94822 1766 aa25■■□□□ 1.59
TSSC4-210ENST00000496468 SOX12O15370 315 aa25■■□□□ 1.59
TSSC4-210ENST00000496468 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
TSSC4-210ENST00000496468 NUTM2BA6NNL0 878 aaPredicted RBP24.99■■□□□ 1.59
TSSC4-210ENST00000496468 NUTM2EB1AL46 878 aaPredicted RBP24.99■■□□□ 1.59
TSSC4-210ENST00000496468 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
TSSC4-210ENST00000496468 NUTM2AQ8IVF1 878 aaPredicted RBP24.99■■□□□ 1.59
TSSC4-210ENST00000496468 GCP02774 474 aa24.98■■□□□ 1.59
TSSC4-210ENST00000496468 CPDO75976 1380 aa24.95■■□□□ 1.59
TSSC4-210ENST00000496468 ABCC6O95255 1503 aa24.95■■□□□ 1.58
TSSC4-210ENST00000496468 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
TSSC4-210ENST00000496468 PLCH1Q4KWH8 1693 aa24.94■■□□□ 1.58
TSSC4-210ENST00000496468 AATKQ6ZMQ8 1374 aa24.94■■□□□ 1.58
TSSC4-210ENST00000496468 PARD3Q8TEW0 1356 aa24.94■■□□□ 1.58
TSSC4-210ENST00000496468 KIAA0232Q92628 1395 aa24.94■■□□□ 1.58
TSSC4-210ENST00000496468 TNNT2P45379 298 aaPredicted RBP24.93■■□□□ 1.58
TSSC4-210ENST00000496468 ADAMTS2O95450 1211 aa24.92■■□□□ 1.58
TSSC4-210ENST00000496468 ZC3H6P61129 1189 aaKnown RBP24.91■■□□□ 1.58
TSSC4-210ENST00000496468 PRDM11Q9NQV5 511 aa24.91■■□□□ 1.58
TSSC4-210ENST00000496468 SMG6Q86US8 1419 aaKnown RBP24.91■■□□□ 1.58
TSSC4-210ENST00000496468 LMO7Q8WWI1 1683 aa24.91■■□□□ 1.58
TSSC4-210ENST00000496468 PEAK1Q9H792 1746 aa24.9■■□□□ 1.58
TSSC4-210ENST00000496468 ZBTB7CA1YPR0 619 aa24.9■■□□□ 1.58
TSSC4-210ENST00000496468 MEX3CQ5U5Q3 659 aaKnown RBP24.9■■□□□ 1.58
TSSC4-210ENST00000496468 MAP2P11137 1827 aaKnown RBP24.9■■□□□ 1.58
TSSC4-210ENST00000496468 RTL1A6NKG5 1358 aa24.9■■□□□ 1.58
TSSC4-210ENST00000496468 MAP3K19Q56UN5 1328 aa24.88■■□□□ 1.57
TSSC4-210ENST00000496468 RRS1Q15050 365 aaKnown RBP24.88■■□□□ 1.57
TSSC4-210ENST00000496468 NWD2Q9ULI1 1742 aa24.88■■□□□ 1.57
TSSC4-210ENST00000496468 COL18A1P39060 1754 aa24.88■■□□□ 1.57
TSSC4-210ENST00000496468 RALBP1Q15311 655 aa24.87■■□□□ 1.57
TSSC4-210ENST00000496468 ARHGEF25Q86VW2 580 aa24.87■■□□□ 1.57
TSSC4-210ENST00000496468 CDK12Q9NYV4 1490 aaPredicted RBP24.86■■□□□ 1.57
TSSC4-210ENST00000496468 FBLN1P23142 703 aa24.86■■□□□ 1.57
TSSC4-210ENST00000496468 FLT4P35916 1363 aa24.85■■□□□ 1.57
TSSC4-210ENST00000496468 KIF24Q5T7B8 1368 aa24.85■■□□□ 1.57
TSSC4-210ENST00000496468 C8orf37Q96NL8 207 aa24.85■■□□□ 1.57
TSSC4-210ENST00000496468 NRAPQ86VF7 1730 aa24.85■■□□□ 1.57
TSSC4-210ENST00000496468 ANP32CO43423 234 aa24.84■■□□□ 1.57
TSSC4-210ENST00000496468 CHRNA2Q15822 529 aa24.84■■□□□ 1.57
TSSC4-210ENST00000496468 PRKRIP1Q9H875 184 aaPredicted RBP24.84■■□□□ 1.57
TSSC4-210ENST00000496468 EMILIN1Q9Y6C2 1016 aa24.84■■□□□ 1.57
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