RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
HPS4-217ENST00000496385 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
HPS4-217ENST00000496385 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
HPS4-217ENST00000496385 ARXQ96QS3 562 aa11.41□□□□□ -0.58
HPS4-217ENST00000496385 ZNF500O60304 480 aaPredicted RBP11.41□□□□□ -0.58
HPS4-217ENST00000496385 CNGB1Q14028 1251 aaPredicted RBP11.41□□□□□ -0.58
HPS4-217ENST00000496385 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
HPS4-217ENST00000496385 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
HPS4-217ENST00000496385 GTPBP4Q9BZE4 634 aaKnown RBP11.4□□□□□ -0.58
HPS4-217ENST00000496385 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
HPS4-217ENST00000496385 SEC24BO95487 1268 aa11.39□□□□□ -0.59
HPS4-217ENST00000496385 MCM5P33992 734 aa11.39□□□□□ -0.59
HPS4-217ENST00000496385 SCAF11Q99590 1463 aaKnown RBP11.39□□□□□ -0.59
HPS4-217ENST00000496385 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
HPS4-217ENST00000496385 ZFYVE9O95405 1425 aa11.39□□□□□ -0.59
HPS4-217ENST00000496385 NEURL4Q96JN8 1562 aa11.39□□□□□ -0.59
HPS4-217ENST00000496385 ADGRF5Q8IZF2 1346 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 ARHGAP23Q9P227 1491 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 SLIT1O75093 1534 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 PDE3AQ14432 1141 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 GBP4Q96PP9 640 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 CCDC94Q9BW85 323 aaPredicted RBP11.38□□□□□ -0.59
HPS4-217ENST00000496385 ZNF521Q96K83 1311 aa11.38□□□□□ -0.59
HPS4-217ENST00000496385 NEXMIFQ5QGS0 1516 aa11.37□□□□□ -0.59
HPS4-217ENST00000496385 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
HPS4-217ENST00000496385 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
HPS4-217ENST00000496385 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
HPS4-217ENST00000496385 NCOA3Q9Y6Q9 1424 aa11.37□□□□□ -0.59
HPS4-217ENST00000496385 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
HPS4-217ENST00000496385 KDM5AP29375 1690 aaKnown RBP11.36□□□□□ -0.59
HPS4-217ENST00000496385 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
HPS4-217ENST00000496385 LETM1O95202 739 aaPredicted RBP11.36□□□□□ -0.59
HPS4-217ENST00000496385 NOL7Q9UMY1 257 aaKnown RBP11.36□□□□□ -0.59
HPS4-217ENST00000496385 TRMT2AQ8IZ69 625 aaKnown RBP11.36□□□□□ -0.59
HPS4-217ENST00000496385 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
HPS4-217ENST00000496385 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
HPS4-217ENST00000496385 UQCRHLA0A096LP55 91 aa11.35□□□□□ -0.59
HPS4-217ENST00000496385 UQCRHP07919 91 aa11.35□□□□□ -0.59
HPS4-217ENST00000496385 PMFBP1Q8TBY8 1022 aa11.35□□□□□ -0.59
HPS4-217ENST00000496385 RBM33Q96EV2 1170 aaKnown RBP11.35□□□□□ -0.59
HPS4-217ENST00000496385 DDIT3P35638 169 aa11.35□□□□□ -0.59
HPS4-217ENST00000496385 NASPP49321 788 aaPredicted RBP11.35□□□□□ -0.59
HPS4-217ENST00000496385 NGEFQ8N5V2 710 aa11.35□□□□□ -0.59
HPS4-217ENST00000496385 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
HPS4-217ENST00000496385 IQGAP1P46940 1657 aa11.35□□□□□ -0.59
HPS4-217ENST00000496385 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
HPS4-217ENST00000496385 HDGFP51858 240 aaKnown RBP11.34□□□□□ -0.59
HPS4-217ENST00000496385 GAS2L3Q86XJ1 694 aa11.34□□□□□ -0.59
HPS4-217ENST00000496385 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.34□□□□□ -0.59
HPS4-217ENST00000496385 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
HPS4-217ENST00000496385 PPLO60437 1756 aa11.34□□□□□ -0.59
HPS4-217ENST00000496385 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
HPS4-217ENST00000496385 IGHDP01880 384 aa11.34□□□□□ -0.59
HPS4-217ENST00000496385 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
HPS4-217ENST00000496385 TAF7LQ5H9L4 462 aa11.34□□□□□ -0.59
HPS4-217ENST00000496385 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
HPS4-217ENST00000496385 SASS6Q6UVJ0 657 aa11.34□□□□□ -0.59
HPS4-217ENST00000496385 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.59
HPS4-217ENST00000496385 NKTRP30414 1462 aaKnown RBP11.33□□□□□ -0.6
HPS4-217ENST00000496385 TMEM132EQ6IEE7 984 aa11.33□□□□□ -0.6
HPS4-217ENST00000496385 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
HPS4-217ENST00000496385 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
HPS4-217ENST00000496385 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
HPS4-217ENST00000496385 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
HPS4-217ENST00000496385 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 CFAP70Q5T0N1 1121 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 SNX21Q969T3 373 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 RPGRIP1LQ68CZ1 1315 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
HPS4-217ENST00000496385 ZHX1Q9UKY1 873 aaPredicted RBP11.32□□□□□ -0.6
HPS4-217ENST00000496385 IFT172Q9UG01 1749 aa11.32□□□□□ -0.6
HPS4-217ENST00000496385 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
HPS4-217ENST00000496385 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
HPS4-217ENST00000496385 STK26Q9P289 416 aa11.31□□□□□ -0.6
HPS4-217ENST00000496385 MED14O60244 1454 aa11.31□□□□□ -0.6
HPS4-217ENST00000496385 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
HPS4-217ENST00000496385 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
HPS4-217ENST00000496385 METP08581 1390 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 PLEKHH1Q9ULM0 1364 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 GOLGA6L22H0YM25 854 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 RAB3GAP1Q15042 981 aa11.3□□□□□ -0.6
HPS4-217ENST00000496385 RBM25P49756 843 aaKnown RBP11.29□□□□□ -0.6
HPS4-217ENST00000496385 ZNF445P59923 1031 aa11.29□□□□□ -0.6
HPS4-217ENST00000496385 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
HPS4-217ENST00000496385 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
HPS4-217ENST00000496385 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
HPS4-217ENST00000496385 NBPF1Q3BBV0 1214 aa11.28□□□□□ -0.6
HPS4-217ENST00000496385 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
HPS4-217ENST00000496385 PIK3C2GO75747 1445 aa11.28□□□□□ -0.6
HPS4-217ENST00000496385 KCNA6P17658 529 aa11.28□□□□□ -0.6
HPS4-217ENST00000496385 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
HPS4-217ENST00000496385 STRCP1A6NGW2 1772 aa11.27□□□□□ -0.61
HPS4-217ENST00000496385 E9PSI1 815 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms