RNA–Protein interactions for RNA: ENST00000496322.1

CLCA4-202, Transcript of chloride channel accessory 4, humanhuman

TSL 3

Gene CLCA4, Length 482 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-202ENST00000496322 TLL2Q9Y6L7 1015 aa15.45■□□□□ 0.06
CLCA4-202ENST00000496322 SLC24A3Q9HC58 644 aa15.44■□□□□ 0.06
CLCA4-202ENST00000496322 WFS1O76024 890 aa15.43■□□□□ 0.06
CLCA4-202ENST00000496322 PRPF38BQ5VTL8 546 aaKnown RBP15.43■□□□□ 0.06
CLCA4-202ENST00000496322 CAPN5O15484 640 aaPredicted RBP15.41■□□□□ 0.06
CLCA4-202ENST00000496322 KIFC2Q96AC6 838 aa15.41■□□□□ 0.06
CLCA4-202ENST00000496322 MAP10Q9P2G4 905 aa15.41■□□□□ 0.06
CLCA4-202ENST00000496322 VARSP26640 1264 aaKnown RBP15.4■□□□□ 0.06
CLCA4-202ENST00000496322 MYSM1Q5VVJ2 828 aa15.4■□□□□ 0.06
CLCA4-202ENST00000496322 LIMD1Q9UGP4 676 aa15.4■□□□□ 0.06
CLCA4-202ENST00000496322 BMP1P13497 986 aa15.39■□□□□ 0.05
CLCA4-202ENST00000496322 NFX1Q12986 1120 aaKnown RBP15.39■□□□□ 0.05
CLCA4-202ENST00000496322 F12P00748 615 aaPredicted RBP15.38■□□□□ 0.05
CLCA4-202ENST00000496322 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
CLCA4-202ENST00000496322 QPCTQ16769 361 aa15.37■□□□□ 0.05
CLCA4-202ENST00000496322 TSC1Q92574 1164 aa15.37■□□□□ 0.05
CLCA4-202ENST00000496322 NUTM2BA6NNL0 878 aaPredicted RBP15.36■□□□□ 0.05
CLCA4-202ENST00000496322 NUTM2EB1AL46 878 aaPredicted RBP15.36■□□□□ 0.05
CLCA4-202ENST00000496322 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
CLCA4-202ENST00000496322 NUTM2AQ8IVF1 878 aaPredicted RBP15.36■□□□□ 0.05
CLCA4-202ENST00000496322 PER1O15534 1290 aaPredicted RBP15.35■□□□□ 0.05
CLCA4-202ENST00000496322 TRIM46Q7Z4K8 759 aa15.35■□□□□ 0.05
CLCA4-202ENST00000496322 NNTQ13423 1086 aa15.34■□□□□ 0.05
CLCA4-202ENST00000496322 FOXJ1Q92949 421 aa15.34■□□□□ 0.05
CLCA4-202ENST00000496322 MPNDQ8N594 471 aa15.33■□□□□ 0.04
CLCA4-202ENST00000496322 TERTO14746 1132 aaKnown RBP15.32■□□□□ 0.04
CLCA4-202ENST00000496322 FAM174AQ8TBP5 190 aa15.32■□□□□ 0.04
CLCA4-202ENST00000496322 LILRB3O75022 631 aa15.31■□□□□ 0.04
CLCA4-202ENST00000496322 TUSC1Q2TAM9 212 aa15.31■□□□□ 0.04
CLCA4-202ENST00000496322 AGERQ15109 404 aa15.28■□□□□ 0.04
CLCA4-202ENST00000496322 CLK2P49760 499 aaKnown RBP15.27■□□□□ 0.04
CLCA4-202ENST00000496322 ARID5BQ14865 1188 aa15.27■□□□□ 0.04
CLCA4-202ENST00000496322 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
CLCA4-202ENST00000496322 ADH1CP00326 375 aa15.26■□□□□ 0.03
CLCA4-202ENST00000496322 LCE2CQ5TA81 110 aa15.26■□□□□ 0.03
CLCA4-202ENST00000496322 WDR4P57081 412 aaKnown RBP15.25■□□□□ 0.03
CLCA4-202ENST00000496322 C4orf48Q5BLP8 95 aa15.25■□□□□ 0.03
CLCA4-202ENST00000496322 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
CLCA4-202ENST00000496322 TIMP2P16035 220 aa15.24■□□□□ 0.03
CLCA4-202ENST00000496322 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
CLCA4-202ENST00000496322 ZFP42Q96MM3 310 aa15.24■□□□□ 0.03
CLCA4-202ENST00000496322 CDK15Q96Q40 435 aa15.24■□□□□ 0.03
CLCA4-202ENST00000496322 BPHLQ86WA6 291 aaPredicted RBP15.23■□□□□ 0.03
CLCA4-202ENST00000496322 RSPH6AQ9H0K4 717 aa15.23■□□□□ 0.03
CLCA4-202ENST00000496322 WIPF1O43516 503 aa15.22■□□□□ 0.03
CLCA4-202ENST00000496322 MRPL14Q6P1L8 145 aaKnown RBP15.2■□□□□ 0.02
CLCA4-202ENST00000496322 ARMC2Q8NEN0 867 aa15.2■□□□□ 0.02
CLCA4-202ENST00000496322 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
CLCA4-202ENST00000496322 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
CLCA4-202ENST00000496322 SLC16A10Q8TF71 515 aa15.17■□□□□ 0.02
CLCA4-202ENST00000496322 PURBQ96QR8 312 aaKnown RBP15.17■□□□□ 0.02
CLCA4-202ENST00000496322 NR3C2P08235 984 aa15.16■□□□□ 0.02
CLCA4-202ENST00000496322 GRM5P41594 1212 aa15.16■□□□□ 0.02
CLCA4-202ENST00000496322 NR5A1Q13285 461 aa15.16■□□□□ 0.02
CLCA4-202ENST00000496322 SCARF1Q14162 830 aa15.16■□□□□ 0.02
CLCA4-202ENST00000496322 NBPF14Q5TI25 921 aa15.16■□□□□ 0.02
CLCA4-202ENST00000496322 ZIC2O95409 532 aaPredicted RBP15.15■□□□□ 0.02
CLCA4-202ENST00000496322 ZFAND3Q9H8U3 227 aa15.15■□□□□ 0.02
CLCA4-202ENST00000496322 VEGFBP49765 207 aa15.14■□□□□ 0.01
CLCA4-202ENST00000496322 INSM1Q01101 510 aaPredicted RBP15.14■□□□□ 0.01
CLCA4-202ENST00000496322 SH3RF1Q7Z6J0 888 aa15.14■□□□□ 0.01
CLCA4-202ENST00000496322 ITPKCQ96DU7 683 aa15.14■□□□□ 0.01
CLCA4-202ENST00000496322 MAGEB6P1A0A0J9YX57 407 aa15.12■□□□□ 0.01
CLCA4-202ENST00000496322 CTDSPL2Q05D32 466 aa15.12■□□□□ 0.01
CLCA4-202ENST00000496322 SH3BP5LQ7L8J4 393 aa15.12■□□□□ 0.01
CLCA4-202ENST00000496322 C1QTNF2Q9BXJ5 285 aa15.12■□□□□ 0.01
CLCA4-202ENST00000496322 GPBP1L1Q9HC44 474 aaPredicted RBP15.11■□□□□ 0.01
CLCA4-202ENST00000496322 NPAS3Q8IXF0 933 aa15.09■□□□□ 0.01
CLCA4-202ENST00000496322 KDM4CQ9H3R0 1056 aa15.09■□□□□ 0.01
CLCA4-202ENST00000496322 STK17AQ9UEE5 414 aa15.09■□□□□ 0.01
CLCA4-202ENST00000496322 SOBPA7XYQ1 873 aa15.08■□□□□ 0
CLCA4-202ENST00000496322 FSHRP23945 695 aa15.08■□□□□ 0
CLCA4-202ENST00000496322 CARD14Q9BXL6 1004 aa15.08■□□□□ 0
CLCA4-202ENST00000496322 SKIV2LQ15477 1246 aaKnown RBP15.07■□□□□ 0
CLCA4-202ENST00000496322 C6orf118Q5T5N4 469 aa15.07■□□□□ 0
CLCA4-202ENST00000496322 VASH1Q7L8A9 365 aaPredicted RBP15.07■□□□□ 0
CLCA4-202ENST00000496322 H3BM21 787 aa15.06■□□□□ 0
CLCA4-202ENST00000496322 FBXO31Q5XUX0 539 aaPredicted RBP15.06■□□□□ 0
CLCA4-202ENST00000496322 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
CLCA4-202ENST00000496322 PROCA1Q8NCQ7 364 aaPredicted RBP15.06■□□□□ 0
CLCA4-202ENST00000496322 LRRN4Q8WUT4 740 aa15.06■□□□□ 0
CLCA4-202ENST00000496322 IRF7Q92985 503 aa15.06■□□□□ 0
CLCA4-202ENST00000496322 FAM117AQ9C073 453 aa15.06■□□□□ 0
CLCA4-202ENST00000496322 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
CLCA4-202ENST00000496322 MAP4K5Q9Y4K4 846 aa15.06■□□□□ 0
CLCA4-202ENST00000496322 GMPRP36959 345 aa15.05■□□□□ -0
CLCA4-202ENST00000496322 SH3D19Q5HYK7 790 aa15.05■□□□□ -0
CLCA4-202ENST00000496322 GPKOWQ92917 476 aaPredicted RBP eCLIP15.05■□□□□ -0
CLCA4-202ENST00000496322 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
CLCA4-202ENST00000496322 ERFEQ4G0M1 354 aa15.02■□□□□ -0
CLCA4-202ENST00000496322 ERBB4Q15303 1308 aa15.01□□□□□ -0.01
CLCA4-202ENST00000496322 UPP2O95045 317 aa15.01□□□□□ -0.01
CLCA4-202ENST00000496322 BMP2P12643 396 aa15.01□□□□□ -0.01
CLCA4-202ENST00000496322 MEIOBQ8N635 442 aa15.01□□□□□ -0.01
CLCA4-202ENST00000496322 LINC00528Q8N1L1 170 aa15□□□□□ -0.01
CLCA4-202ENST00000496322 BCANQ96GW7 911 aa15□□□□□ -0.01
CLCA4-202ENST00000496322 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
CLCA4-202ENST00000496322 FKBPLQ9UIM3 349 aa15□□□□□ -0.01
CLCA4-202ENST00000496322 MAN1A2O60476 641 aa14.99□□□□□ -0.01
CLCA4-202ENST00000496322 NR6A1Q15406 480 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms