RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
PTPN7-218ENST00000496197 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
PTPN7-218ENST00000496197 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
PTPN7-218ENST00000496197 EDC4Q6P2E9 1401 aaKnown RBP18.65■□□□□ 0.58
PTPN7-218ENST00000496197 PSME1Q06323 249 aa18.65■□□□□ 0.58
PTPN7-218ENST00000496197 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
PTPN7-218ENST00000496197 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
PTPN7-218ENST00000496197 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
PTPN7-218ENST00000496197 ABCA3Q99758 1704 aa18.64■□□□□ 0.57
PTPN7-218ENST00000496197 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
PTPN7-218ENST00000496197 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
PTPN7-218ENST00000496197 ANKRD26Q9UPS8 1709 aa18.63■□□□□ 0.57
PTPN7-218ENST00000496197 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
PTPN7-218ENST00000496197 TNS3Q68CZ2 1445 aa18.62■□□□□ 0.57
PTPN7-218ENST00000496197 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
PTPN7-218ENST00000496197 HSPA1LP34931 641 aa18.62■□□□□ 0.57
PTPN7-218ENST00000496197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTPN7-218ENST00000496197 SBNO1A3KN83 1393 aa18.61■□□□□ 0.57
PTPN7-218ENST00000496197 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
PTPN7-218ENST00000496197 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
PTPN7-218ENST00000496197 SPATA31A3Q5VYP0 1347 aa18.61■□□□□ 0.57
PTPN7-218ENST00000496197 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
PTPN7-218ENST00000496197 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
PTPN7-218ENST00000496197 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
PTPN7-218ENST00000496197 MED1Q15648 1581 aaPredicted RBP18.6■□□□□ 0.57
PTPN7-218ENST00000496197 NME9Q86XW9 330 aa18.59■□□□□ 0.57
PTPN7-218ENST00000496197 BRD4O60885 1362 aaPredicted RBP18.58■□□□□ 0.56
PTPN7-218ENST00000496197 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.56
PTPN7-218ENST00000496197 TTC21AQ8NDW8 1320 aa18.57■□□□□ 0.56
PTPN7-218ENST00000496197 PNPLA6Q8IY17 1366 aa18.56■□□□□ 0.56
PTPN7-218ENST00000496197 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
PTPN7-218ENST00000496197 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
PTPN7-218ENST00000496197 FYB1O15117 783 aa18.56■□□□□ 0.56
PTPN7-218ENST00000496197 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
PTPN7-218ENST00000496197 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
PTPN7-218ENST00000496197 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
PTPN7-218ENST00000496197 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
PTPN7-218ENST00000496197 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
PTPN7-218ENST00000496197 SLIT3O75094 1523 aa18.54■□□□□ 0.56
PTPN7-218ENST00000496197 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
PTPN7-218ENST00000496197 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
PTPN7-218ENST00000496197 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
PTPN7-218ENST00000496197 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
PTPN7-218ENST00000496197 ARHGEF10O15013 1369 aa18.52■□□□□ 0.56
PTPN7-218ENST00000496197 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.55
PTPN7-218ENST00000496197 CABLES1Q8TDN4 633 aa18.52■□□□□ 0.55
PTPN7-218ENST00000496197 LTN1O94822 1766 aa18.51■□□□□ 0.55
PTPN7-218ENST00000496197 USP19O94966 1318 aa18.51■□□□□ 0.55
PTPN7-218ENST00000496197 NLRP6P59044 892 aa18.51■□□□□ 0.55
PTPN7-218ENST00000496197 NFAT5O94916 1531 aa18.5■□□□□ 0.55
PTPN7-218ENST00000496197 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
PTPN7-218ENST00000496197 JCADQ9P266 1359 aa18.49■□□□□ 0.55
PTPN7-218ENST00000496197 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
PTPN7-218ENST00000496197 LRP6O75581 1613 aa18.48■□□□□ 0.55
PTPN7-218ENST00000496197 FBLN1P23142 703 aa18.48■□□□□ 0.55
PTPN7-218ENST00000496197 NSD2O96028 1365 aa18.48■□□□□ 0.55
PTPN7-218ENST00000496197 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
PTPN7-218ENST00000496197 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
PTPN7-218ENST00000496197 PEAK1Q9H792 1746 aa18.46■□□□□ 0.55
PTPN7-218ENST00000496197 COG3Q96JB2 828 aa18.46■□□□□ 0.54
PTPN7-218ENST00000496197 RGPD5Q99666 1765 aa18.45■□□□□ 0.54
PTPN7-218ENST00000496197 SOX12O15370 315 aa18.45■□□□□ 0.54
PTPN7-218ENST00000496197 COL18A1P39060 1754 aa18.44■□□□□ 0.54
PTPN7-218ENST00000496197 GCP02774 474 aa18.43■□□□□ 0.54
PTPN7-218ENST00000496197 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
PTPN7-218ENST00000496197 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
PTPN7-218ENST00000496197 PLCH1Q4KWH8 1693 aa18.42■□□□□ 0.54
PTPN7-218ENST00000496197 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
PTPN7-218ENST00000496197 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
PTPN7-218ENST00000496197 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
PTPN7-218ENST00000496197 NUTM2AQ8IVF1 878 aaPredicted RBP18.41■□□□□ 0.54
PTPN7-218ENST00000496197 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
PTPN7-218ENST00000496197 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.54
PTPN7-218ENST00000496197 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.54
PTPN7-218ENST00000496197 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
PTPN7-218ENST00000496197 KIAA0232Q92628 1395 aa18.39■□□□□ 0.53
PTPN7-218ENST00000496197 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
PTPN7-218ENST00000496197 AATKQ6ZMQ8 1374 aa18.37■□□□□ 0.53
PTPN7-218ENST00000496197 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
PTPN7-218ENST00000496197 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
PTPN7-218ENST00000496197 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
PTPN7-218ENST00000496197 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
PTPN7-218ENST00000496197 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
PTPN7-218ENST00000496197 CPDO75976 1380 aa18.36■□□□□ 0.53
PTPN7-218ENST00000496197 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
PTPN7-218ENST00000496197 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
PTPN7-218ENST00000496197 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
PTPN7-218ENST00000496197 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
PTPN7-218ENST00000496197 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
PTPN7-218ENST00000496197 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
PTPN7-218ENST00000496197 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
PTPN7-218ENST00000496197 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
PTPN7-218ENST00000496197 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
PTPN7-218ENST00000496197 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
PTPN7-218ENST00000496197 FAM83GA6ND36 823 aa18.33■□□□□ 0.53
PTPN7-218ENST00000496197 PPP2R1AP30153 589 aa18.33■□□□□ 0.53
PTPN7-218ENST00000496197 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.52
PTPN7-218ENST00000496197 AXIN2Q9Y2T1 843 aa18.33■□□□□ 0.52
PTPN7-218ENST00000496197 ABCC6O95255 1503 aa18.32■□□□□ 0.52
PTPN7-218ENST00000496197 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms