RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
APTX-233ENST00000496030 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
APTX-233ENST00000496030 SPATA31A3Q5VYP0 1347 aa16.8■□□□□ 0.28
APTX-233ENST00000496030 NWD2Q9ULI1 1742 aa16.8■□□□□ 0.28
APTX-233ENST00000496030 VPS72Q15906 364 aa16.8■□□□□ 0.28
APTX-233ENST00000496030 BAG6P46379 1132 aa16.79■□□□□ 0.28
APTX-233ENST00000496030 EN1Q05925 392 aaPredicted RBP16.78■□□□□ 0.28
APTX-233ENST00000496030 R3HDM1Q15032 1099 aaKnown RBP16.78■□□□□ 0.28
APTX-233ENST00000496030 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
APTX-233ENST00000496030 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
APTX-233ENST00000496030 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
APTX-233ENST00000496030 NUDT16Q96DE0 195 aaKnown RBP16.77■□□□□ 0.28
APTX-233ENST00000496030 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
APTX-233ENST00000496030 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
APTX-233ENST00000496030 ATP7BP35670 1465 aa16.76■□□□□ 0.27
APTX-233ENST00000496030 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
APTX-233ENST00000496030 CABP2Q9NPB3 220 aa16.76■□□□□ 0.27
APTX-233ENST00000496030 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
APTX-233ENST00000496030 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
APTX-233ENST00000496030 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
APTX-233ENST00000496030 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
APTX-233ENST00000496030 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
APTX-233ENST00000496030 YY1P25490 414 aa16.74■□□□□ 0.27
APTX-233ENST00000496030 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
APTX-233ENST00000496030 FAM182BQ5T319 152 aa16.74■□□□□ 0.27
APTX-233ENST00000496030 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
APTX-233ENST00000496030 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
APTX-233ENST00000496030 A0A0G2JS52 829 aa16.72■□□□□ 0.27
APTX-233ENST00000496030 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
APTX-233ENST00000496030 MYT1Q01538 1121 aa16.72■□□□□ 0.27
APTX-233ENST00000496030 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
APTX-233ENST00000496030 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
APTX-233ENST00000496030 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
APTX-233ENST00000496030 TNS3Q68CZ2 1445 aa16.71■□□□□ 0.27
APTX-233ENST00000496030 PLEKHG3A1L390 1219 aa16.71■□□□□ 0.27
APTX-233ENST00000496030 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
APTX-233ENST00000496030 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
APTX-233ENST00000496030 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
APTX-233ENST00000496030 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
APTX-233ENST00000496030 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
APTX-233ENST00000496030 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
APTX-233ENST00000496030 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
APTX-233ENST00000496030 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
APTX-233ENST00000496030 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
APTX-233ENST00000496030 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
APTX-233ENST00000496030 THSD7AQ9UPZ6 1657 aa16.66■□□□□ 0.26
APTX-233ENST00000496030 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
APTX-233ENST00000496030 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
APTX-233ENST00000496030 TMF1P82094 1093 aa16.66■□□□□ 0.26
APTX-233ENST00000496030 PPIP5K1Q6PFW1 1433 aa16.66■□□□□ 0.26
APTX-233ENST00000496030 ACEP12821 1306 aa16.66■□□□□ 0.26
APTX-233ENST00000496030 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
APTX-233ENST00000496030 CAMKK2Q96RR4 588 aa16.64■□□□□ 0.25
APTX-233ENST00000496030 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
APTX-233ENST00000496030 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
APTX-233ENST00000496030 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
APTX-233ENST00000496030 SBNO1A3KN83 1393 aa16.63■□□□□ 0.25
APTX-233ENST00000496030 CD163L1Q9NR16 1453 aa16.62■□□□□ 0.25
APTX-233ENST00000496030 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
APTX-233ENST00000496030 PSME1Q06323 249 aa16.62■□□□□ 0.25
APTX-233ENST00000496030 RREB1Q92766 1687 aa16.62■□□□□ 0.25
APTX-233ENST00000496030 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
APTX-233ENST00000496030 NUP188Q5SRE5 1749 aa16.61■□□□□ 0.25
APTX-233ENST00000496030 TRPM3Q9HCF6 1732 aaPredicted RBP16.61■□□□□ 0.25
APTX-233ENST00000496030 ARHGEF10O15013 1369 aa16.61■□□□□ 0.25
APTX-233ENST00000496030 TRIM37O94972 964 aa16.6■□□□□ 0.25
APTX-233ENST00000496030 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
APTX-233ENST00000496030 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
APTX-233ENST00000496030 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
APTX-233ENST00000496030 SSH2Q76I76 1423 aa16.6■□□□□ 0.25
APTX-233ENST00000496030 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
APTX-233ENST00000496030 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
APTX-233ENST00000496030 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
APTX-233ENST00000496030 AKAP12Q02952 1782 aa16.58■□□□□ 0.24
APTX-233ENST00000496030 CRYBG1Q9Y4K1 1723 aa16.57■□□□□ 0.24
APTX-233ENST00000496030 USP6P35125 1406 aa16.57■□□□□ 0.24
APTX-233ENST00000496030 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
APTX-233ENST00000496030 MYOM1P52179 1685 aa16.56■□□□□ 0.24
APTX-233ENST00000496030 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
APTX-233ENST00000496030 KIF7Q2M1P5 1343 aa16.55■□□□□ 0.24
APTX-233ENST00000496030 APBA3O96018 575 aa16.55■□□□□ 0.24
APTX-233ENST00000496030 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
APTX-233ENST00000496030 BRD4O60885 1362 aaPredicted RBP16.54■□□□□ 0.24
APTX-233ENST00000496030 MON2Q7Z3U7 1717 aa16.54■□□□□ 0.24
APTX-233ENST00000496030 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
APTX-233ENST00000496030 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
APTX-233ENST00000496030 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
APTX-233ENST00000496030 NRKQ7Z2Y5 1582 aa16.52■□□□□ 0.24
APTX-233ENST00000496030 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
APTX-233ENST00000496030 TTC21BQ7Z4L5 1316 aa16.52■□□□□ 0.24
APTX-233ENST00000496030 PAK3O75914 559 aaPredicted RBP16.52■□□□□ 0.24
APTX-233ENST00000496030 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.24
APTX-233ENST00000496030 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
APTX-233ENST00000496030 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
APTX-233ENST00000496030 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
APTX-233ENST00000496030 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
APTX-233ENST00000496030 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
APTX-233ENST00000496030 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
APTX-233ENST00000496030 UTRNP46939 3433 aa16.51■□□□□ 0.23
APTX-233ENST00000496030 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms