RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PAK3O75914 559 aaPredicted RBP34.65■■■■□ 3.14
HLA-C-209ENST00000495835 SRPK2P78362 688 aaKnown RBP34.65■■■■□ 3.14
HLA-C-209ENST00000495835 NBPF8Q3BBV2 869 aa34.64■■■■□ 3.14
HLA-C-209ENST00000495835 TONSLQ96HA7 1378 aa34.61■■■■□ 3.13
HLA-C-209ENST00000495835 PLCH1Q4KWH8 1693 aa34.6■■■■□ 3.13
HLA-C-209ENST00000495835 EVC2Q86UK5 1308 aa34.59■■■■□ 3.13
HLA-C-209ENST00000495835 CRYBG1Q9Y4K1 1723 aa34.59■■■■□ 3.13
HLA-C-209ENST00000495835 BRD4O60885 1362 aaPredicted RBP34.59■■■■□ 3.13
HLA-C-209ENST00000495835 FAM83GA6ND36 823 aa34.58■■■■□ 3.13
HLA-C-209ENST00000495835 VPS72Q15906 364 aa34.58■■■■□ 3.13
HLA-C-209ENST00000495835 CABP2Q9NPB3 220 aa34.58■■■■□ 3.13
HLA-C-209ENST00000495835 PPIP5K1Q6PFW1 1433 aa34.57■■■■□ 3.13
HLA-C-209ENST00000495835 PLEKHG5O94827 1062 aa34.57■■■■□ 3.12
HLA-C-209ENST00000495835 COL14A1Q05707 1796 aaKnown RBP34.55■■■■□ 3.12
HLA-C-209ENST00000495835 RALGAPBQ86X10 1494 aa34.55■■■■□ 3.12
HLA-C-209ENST00000495835 ATAD2Q6PL18 1390 aa34.54■■■■□ 3.12
HLA-C-209ENST00000495835 GLI3P10071 1580 aa34.53■■■■□ 3.12
HLA-C-209ENST00000495835 SBNO2Q9Y2G9 1366 aa34.49■■■■□ 3.11
HLA-C-209ENST00000495835 CARD11Q9BXL7 1154 aa34.49■■■■□ 3.11
HLA-C-209ENST00000495835 ONECUT3O60422 494 aaPredicted RBP34.48■■■■□ 3.11
HLA-C-209ENST00000495835 CABP1Q9NZU7 370 aa34.48■■■■□ 3.11
HLA-C-209ENST00000495835 ABTB2Q8N961 1025 aa34.47■■■■□ 3.11
HLA-C-209ENST00000495835 BTG4Q9NY30 223 aa34.47■■■■□ 3.11
HLA-C-209ENST00000495835 PHRF1Q9P1Y6 1649 aaKnown RBP34.47■■■■□ 3.11
HLA-C-209ENST00000495835 NRAPQ86VF7 1730 aa34.47■■■■□ 3.11
HLA-C-209ENST00000495835 PRDM11Q9NQV5 511 aa34.44■■■■□ 3.1
HLA-C-209ENST00000495835 NLRP13Q86W25 1043 aa34.43■■■■□ 3.1
HLA-C-209ENST00000495835 ZNF692Q9BU19 519 aaPredicted RBP34.43■■■■□ 3.1
HLA-C-209ENST00000495835 CCDC9Q9Y3X0 531 aaKnown RBP34.43■■■■□ 3.1
HLA-C-209ENST00000495835 EP400Q96L91 3159 aa34.42■■■■□ 3.1
HLA-C-209ENST00000495835 USP6P35125 1406 aa34.41■■■■□ 3.1
HLA-C-209ENST00000495835 USP19O94966 1318 aa34.4■■■■□ 3.1
HLA-C-209ENST00000495835 CCDC125Q86Z20 511 aa34.4■■■■□ 3.1
HLA-C-209ENST00000495835 KIAA0232Q92628 1395 aa34.39■■■■□ 3.1
HLA-C-209ENST00000495835 NUTM2GQ5VZR2 741 aa34.39■■■■□ 3.1
HLA-C-209ENST00000495835 SEPT12Q8IYM1 358 aa34.38■■■■□ 3.09
HLA-C-209ENST00000495835 SSH2Q76I76 1423 aa34.36■■■■□ 3.09
HLA-C-209ENST00000495835 CPDO75976 1380 aa34.36■■■■□ 3.09
HLA-C-209ENST00000495835 BRWD3Q6RI45 1802 aa34.34■■■■□ 3.09
HLA-C-209ENST00000495835 ZC3H6P61129 1189 aaKnown RBP34.34■■■■□ 3.09
HLA-C-209ENST00000495835 NRKQ7Z2Y5 1582 aa34.34■■■■□ 3.09
HLA-C-209ENST00000495835 SLC24A1O60721 1099 aa34.33■■■■□ 3.09
HLA-C-209ENST00000495835 SPATA31A5Q5VU36 1347 aa34.32■■■■□ 3.09
HLA-C-209ENST00000495835 SPATA31A7Q8IWB4 1347 aa34.32■■■■□ 3.09
HLA-C-209ENST00000495835 AKAP12Q02952 1782 aa34.32■■■■□ 3.08
HLA-C-209ENST00000495835 GCP02774 474 aa34.32■■■■□ 3.08
HLA-C-209ENST00000495835 PUS7Q96PZ0 661 aaKnown RBP34.32■■■■□ 3.08
HLA-C-209ENST00000495835 CLSPNQ9HAW4 1339 aa34.3■■■■□ 3.08
HLA-C-209ENST00000495835 CPSF1Q10570 1443 aaKnown RBP34.3■■■■□ 3.08
HLA-C-209ENST00000495835 NLRP6P59044 892 aa34.29■■■■□ 3.08
HLA-C-209ENST00000495835 CHRNA2Q15822 529 aa34.29■■■■□ 3.08
HLA-C-209ENST00000495835 TIMELESSQ9UNS1 1208 aa34.29■■■■□ 3.08
HLA-C-209ENST00000495835 TTC21AQ8NDW8 1320 aa34.28■■■■□ 3.08
HLA-C-209ENST00000495835 FAM98CQ17RN3 349 aaKnown RBP34.26■■■■□ 3.08
HLA-C-209ENST00000495835 KRT27Q7Z3Y8 459 aa34.26■■■■□ 3.08
HLA-C-209ENST00000495835 TTC21BQ7Z4L5 1316 aa34.26■■■■□ 3.07
HLA-C-209ENST00000495835 SLIT3O75094 1523 aa34.25■■■■□ 3.07
HLA-C-209ENST00000495835 PIK3C2AO00443 1686 aa34.24■■■■□ 3.07
HLA-C-209ENST00000495835 SPATA31A1Q5TZJ5 1347 aa34.24■■■■□ 3.07
HLA-C-209ENST00000495835 LMO7Q8WWI1 1683 aa34.23■■■■□ 3.07
HLA-C-209ENST00000495835 KTN1Q86UP2 1357 aaKnown RBP34.23■■■■□ 3.07
HLA-C-209ENST00000495835 EVA1CP58658 441 aa34.22■■■■□ 3.07
HLA-C-209ENST00000495835 CAMTA1Q9Y6Y1 1673 aa34.21■■■■□ 3.07
HLA-C-209ENST00000495835 BLMP54132 1417 aaPredicted RBP34.21■■■■□ 3.07
HLA-C-209ENST00000495835 A0A0G2JS52 829 aa34.2■■■■□ 3.07
HLA-C-209ENST00000495835 MYT1Q01538 1121 aa34.2■■■■□ 3.07
HLA-C-209ENST00000495835 STRN4Q9NRL3 753 aa34.2■■■■□ 3.07
HLA-C-209ENST00000495835 MON2Q7Z3U7 1717 aa34.19■■■■□ 3.06
HLA-C-209ENST00000495835 THSD7AQ9UPZ6 1657 aa34.19■■■■□ 3.06
HLA-C-209ENST00000495835 KCNH5Q8NCM2 988 aa34.18■■■■□ 3.06
HLA-C-209ENST00000495835 AATKQ6ZMQ8 1374 aa34.17■■■■□ 3.06
HLA-C-209ENST00000495835 TESK2Q96S53 571 aa34.17■■■■□ 3.06
HLA-C-209ENST00000495835 ST20-MTHFSA0A0A6YYL1 179 aa34.16■■■■□ 3.06
HLA-C-209ENST00000495835 BARGINQ6ZT62 677 aa34.15■■■■□ 3.06
HLA-C-209ENST00000495835 HDGFL2Q7Z4V5 671 aaPredicted RBP34.14■■■■□ 3.06
HLA-C-209ENST00000495835 TMC1Q8TDI8 760 aa34.13■■■■□ 3.05
HLA-C-209ENST00000495835 TERF2IPQ9NYB0 399 aa34.13■■■■□ 3.05
HLA-C-209ENST00000495835 THRAP3Q9Y2W1 955 aaKnown RBP34.13■■■■□ 3.05
HLA-C-209ENST00000495835 CD163L1Q9NR16 1453 aa34.13■■■■□ 3.05
HLA-C-209ENST00000495835 NINLQ9Y2I6 1382 aa34.12■■■■□ 3.05
HLA-C-209ENST00000495835 SF3B2Q13435 895 aaKnown RBP34.11■■■■□ 3.05
HLA-C-209ENST00000495835 PCGF6Q9BYE7 350 aa34.11■■■■□ 3.05
HLA-C-209ENST00000495835 COL5A2P05997 1499 aaPredicted RBP34.1■■■■□ 3.05
HLA-C-209ENST00000495835 LARP1Q6PKG0 1096 aaKnown RBP34.1■■■■□ 3.05
HLA-C-209ENST00000495835 SLC12A5Q9H2X9 1139 aa34.1■■■■□ 3.05
HLA-C-209ENST00000495835 USP31Q70CQ4 1352 aa34.1■■■■□ 3.05
HLA-C-209ENST00000495835 TCP11L2Q8N4U5 519 aa34.09■■■■□ 3.05
HLA-C-209ENST00000495835 ARHGEF25Q86VW2 580 aa34.08■■■■□ 3.05
HLA-C-209ENST00000495835 USP54Q70EL1 1684 aa34.08■■■■□ 3.05
HLA-C-209ENST00000495835 COL18A1P39060 1754 aa34.08■■■■□ 3.05
HLA-C-209ENST00000495835 EDC4Q6P2E9 1401 aaKnown RBP34.07■■■■□ 3.04
HLA-C-209ENST00000495835 CRB1P82279 1406 aa34.05■■■■□ 3.04
HLA-C-209ENST00000495835 USP35Q9P2H5 1018 aa34.05■■■■□ 3.04
HLA-C-209ENST00000495835 USP47Q96K76 1375 aa34.05■■■■□ 3.04
HLA-C-209ENST00000495835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.03■■■■□ 3.04
HLA-C-209ENST00000495835 ZBTB7CA1YPR0 619 aa34.02■■■■□ 3.04
HLA-C-209ENST00000495835 ABCC6O95255 1503 aa34.02■■■■□ 3.04
HLA-C-209ENST00000495835 A0A1W2PP64 1363 aa34.01■■■■□ 3.04
HLA-C-209ENST00000495835 NFAT5O94916 1531 aa34.01■■■■□ 3.04
HLA-C-209ENST00000495835 TMF1P82094 1093 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms