RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
ECHDC3-204ENST00000495787 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
ECHDC3-204ENST00000495787 USP32Q8NFA0 1604 aa14.58□□□□□ -0.08
ECHDC3-204ENST00000495787 ANKRD36BQ8N2N9 1353 aa14.58□□□□□ -0.08
ECHDC3-204ENST00000495787 C1orf167Q5SNV9 1468 aa14.57□□□□□ -0.08
ECHDC3-204ENST00000495787 WASLO00401 505 aaPredicted RBP14.57□□□□□ -0.08
ECHDC3-204ENST00000495787 CARD14Q9BXL6 1004 aa14.57□□□□□ -0.08
ECHDC3-204ENST00000495787 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
ECHDC3-204ENST00000495787 NALCNQ8IZF0 1738 aa14.57□□□□□ -0.08
ECHDC3-204ENST00000495787 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
ECHDC3-204ENST00000495787 CC2D1BQ5T0F9 858 aaKnown RBP14.56□□□□□ -0.08
ECHDC3-204ENST00000495787 FNBP4Q8N3X1 1017 aaPredicted RBP14.56□□□□□ -0.08
ECHDC3-204ENST00000495787 SOS2Q07890 1332 aaPredicted RBP14.56□□□□□ -0.08
ECHDC3-204ENST00000495787 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
ECHDC3-204ENST00000495787 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
ECHDC3-204ENST00000495787 NSD3Q9BZ95 1437 aa14.54□□□□□ -0.08
ECHDC3-204ENST00000495787 ATRNO75882 1429 aa14.53□□□□□ -0.08
ECHDC3-204ENST00000495787 NLRP13Q86W25 1043 aa14.53□□□□□ -0.08
ECHDC3-204ENST00000495787 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
ECHDC3-204ENST00000495787 ATP7BP35670 1465 aa14.52□□□□□ -0.08
ECHDC3-204ENST00000495787 EP400Q96L91 3159 aa14.52□□□□□ -0.09
ECHDC3-204ENST00000495787 CD163L1Q9NR16 1453 aa14.51□□□□□ -0.09
ECHDC3-204ENST00000495787 A0A1W2PP64 1363 aa14.51□□□□□ -0.09
ECHDC3-204ENST00000495787 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
ECHDC3-204ENST00000495787 ORAI2Q96SN7 254 aa14.51□□□□□ -0.09
ECHDC3-204ENST00000495787 COL22A1Q8NFW1 1626 aaPredicted RBP14.51□□□□□ -0.09
ECHDC3-204ENST00000495787 NSD2O96028 1365 aa14.5□□□□□ -0.09
ECHDC3-204ENST00000495787 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
ECHDC3-204ENST00000495787 NUDT16Q96DE0 195 aaKnown RBP14.5□□□□□ -0.09
ECHDC3-204ENST00000495787 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
ECHDC3-204ENST00000495787 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
ECHDC3-204ENST00000495787 PPIP5K1Q6PFW1 1433 aa14.49□□□□□ -0.09
ECHDC3-204ENST00000495787 CDC42BPGQ6DT37 1551 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 AKAP12Q02952 1782 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 PPP2R1AP30153 589 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 ITSN1Q15811 1721 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 ANKRD26Q9UPS8 1709 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 BCL9LQ86UU0 1499 aa14.48□□□□□ -0.09
ECHDC3-204ENST00000495787 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
ECHDC3-204ENST00000495787 FAM9BQ8IZU0 186 aa14.47□□□□□ -0.09
ECHDC3-204ENST00000495787 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
ECHDC3-204ENST00000495787 KIF20BQ96Q89 1820 aa14.47□□□□□ -0.09
ECHDC3-204ENST00000495787 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
ECHDC3-204ENST00000495787 PRR36Q9H6K5 1346 aa14.46□□□□□ -0.09
ECHDC3-204ENST00000495787 GJD4Q96KN9 370 aaPredicted RBP14.46□□□□□ -0.09
ECHDC3-204ENST00000495787 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.1
ECHDC3-204ENST00000495787 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.1
ECHDC3-204ENST00000495787 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
ECHDC3-204ENST00000495787 ANKARQ7Z5J8 1434 aa14.44□□□□□ -0.1
ECHDC3-204ENST00000495787 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
ECHDC3-204ENST00000495787 BLMP54132 1417 aaPredicted RBP14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 RGPD8O14715 1765 aaPredicted RBP14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 ESCO1Q5FWF5 840 aa14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 MARF1Q9Y4F3 1742 aaKnown RBP14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 PXDNQ92626 1479 aa14.43□□□□□ -0.1
ECHDC3-204ENST00000495787 FYB1O15117 783 aa14.41□□□□□ -0.1
ECHDC3-204ENST00000495787 HNRNPUQ00839 825 aaKnown RBP eCLIP14.41□□□□□ -0.1
ECHDC3-204ENST00000495787 INSRP06213 1382 aa14.41□□□□□ -0.1
ECHDC3-204ENST00000495787 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.41□□□□□ -0.1
ECHDC3-204ENST00000495787 FOXO3O43524 673 aa14.4□□□□□ -0.1
ECHDC3-204ENST00000495787 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
ECHDC3-204ENST00000495787 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
ECHDC3-204ENST00000495787 ACEP12821 1306 aa14.39□□□□□ -0.11
ECHDC3-204ENST00000495787 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
ECHDC3-204ENST00000495787 POLR3AO14802 1390 aaPredicted RBP14.38□□□□□ -0.11
ECHDC3-204ENST00000495787 SLIT2O94813 1529 aa14.38□□□□□ -0.11
ECHDC3-204ENST00000495787 NUTM2FA1L443 756 aa14.38□□□□□ -0.11
ECHDC3-204ENST00000495787 SF3B2Q13435 895 aaKnown RBP14.38□□□□□ -0.11
ECHDC3-204ENST00000495787 GGNBP2Q9H3C7 697 aa14.38□□□□□ -0.11
ECHDC3-204ENST00000495787 GLI3P10071 1580 aa14.38□□□□□ -0.11
ECHDC3-204ENST00000495787 DEFB132Q7Z7B7 95 aa14.37□□□□□ -0.11
ECHDC3-204ENST00000495787 USP6P35125 1406 aa14.36□□□□□ -0.11
ECHDC3-204ENST00000495787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
ECHDC3-204ENST00000495787 LRP5O75197 1615 aa14.36□□□□□ -0.11
ECHDC3-204ENST00000495787 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
ECHDC3-204ENST00000495787 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
ECHDC3-204ENST00000495787 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
ECHDC3-204ENST00000495787 SEPT12Q8IYM1 358 aa14.34□□□□□ -0.11
ECHDC3-204ENST00000495787 SPATA31A3Q5VYP0 1347 aa14.34□□□□□ -0.11
ECHDC3-204ENST00000495787 TTC21BQ7Z4L5 1316 aa14.34□□□□□ -0.11
ECHDC3-204ENST00000495787 SSH2Q76I76 1423 aa14.33□□□□□ -0.11
ECHDC3-204ENST00000495787 MTHFSP49914 203 aa14.33□□□□□ -0.12
ECHDC3-204ENST00000495787 NME9Q86XW9 330 aa14.33□□□□□ -0.12
ECHDC3-204ENST00000495787 NGDNQ8NEJ9 315 aaKnown RBP14.33□□□□□ -0.12
ECHDC3-204ENST00000495787 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.12
ECHDC3-204ENST00000495787 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
ECHDC3-204ENST00000495787 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
ECHDC3-204ENST00000495787 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
ECHDC3-204ENST00000495787 VPS72Q15906 364 aa14.32□□□□□ -0.12
ECHDC3-204ENST00000495787 BRWD3Q6RI45 1802 aa14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 KIF1AQ12756 1690 aa14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 ONECUT3O60422 494 aaPredicted RBP14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 COG3Q96JB2 828 aa14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 ADAMTS8Q9UP79 889 aa14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
ECHDC3-204ENST00000495787 KRT27Q7Z3Y8 459 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms