RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 RIPK4P57078 832 aa11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 NUTM2GQ5VZR2 741 aa11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 PPLO60437 1756 aa11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 DIAPH1O60610 1272 aaKnown RBP11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 POLR3AO14802 1390 aaPredicted RBP11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 GSE1Q14687 1217 aa11.68□□□□□ -0.54
TM9SF4-207ENST00000495749 NKTRP30414 1462 aaKnown RBP11.67□□□□□ -0.54
TM9SF4-207ENST00000495749 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
TM9SF4-207ENST00000495749 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
TM9SF4-207ENST00000495749 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
TM9SF4-207ENST00000495749 IGHDP01880 384 aa11.66□□□□□ -0.54
TM9SF4-207ENST00000495749 A2ML1A8K2U0 1454 aa11.66□□□□□ -0.54
TM9SF4-207ENST00000495749 RLBP1P12271 317 aa11.66□□□□□ -0.54
TM9SF4-207ENST00000495749 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
TM9SF4-207ENST00000495749 PHACTR3Q96KR7 559 aa11.66□□□□□ -0.54
TM9SF4-207ENST00000495749 POLKQ9UBT6 870 aa11.66□□□□□ -0.54
TM9SF4-207ENST00000495749 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-207ENST00000495749 ATAD2Q6PL18 1390 aa11.65□□□□□ -0.54
TM9SF4-207ENST00000495749 IFT172Q9UG01 1749 aa11.65□□□□□ -0.54
TM9SF4-207ENST00000495749 TNRQ92752 1358 aa11.65□□□□□ -0.54
TM9SF4-207ENST00000495749 DCTN1Q14203 1278 aa11.65□□□□□ -0.55
TM9SF4-207ENST00000495749 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.55
TM9SF4-207ENST00000495749 PTPRMP28827 1452 aa11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 KIAA1210Q9ULL0 1709 aa11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 SETBP1Q9Y6X0 1596 aa11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 CLTCQ00610 1675 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-207ENST00000495749 TMEM131LA2VDJ0 1609 aa11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 ALKQ9UM73 1620 aa11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 ZBTB7CA1YPR0 619 aa11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 PREX1Q8TCU6 1659 aa11.63□□□□□ -0.55
TM9SF4-207ENST00000495749 COG3Q96JB2 828 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 SMC4Q9NTJ3 1288 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 ABCC11Q96J66 1382 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 AGLP35573 1532 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 PPP6R1Q9UPN7 881 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 AMOTL2Q9Y2J4 779 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
TM9SF4-207ENST00000495749 ADAMTSL3P82987 1691 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 ZFYVE9O95405 1425 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 PPIP5K1Q6PFW1 1433 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 NEURL4Q96JN8 1562 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 ROBO2Q9HCK4 1378 aa11.61□□□□□ -0.55
TM9SF4-207ENST00000495749 SEC24BO95487 1268 aa11.6□□□□□ -0.55
TM9SF4-207ENST00000495749 PLEKHF1Q96S99 279 aa11.6□□□□□ -0.55
TM9SF4-207ENST00000495749 FTSJ3Q8IY81 847 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-207ENST00000495749 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
TM9SF4-207ENST00000495749 NGDNQ8NEJ9 315 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-207ENST00000495749 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
TM9SF4-207ENST00000495749 ACEP12821 1306 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 SSH1Q8WYL5 1049 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 CD163L1Q9NR16 1453 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 USP19O94966 1318 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 PCDHB15Q9Y5E8 787 aa11.59□□□□□ -0.55
TM9SF4-207ENST00000495749 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.55
TM9SF4-207ENST00000495749 ARHGEF28Q8N1W1 1705 aaKnown RBP11.58□□□□□ -0.56
TM9SF4-207ENST00000495749 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
TM9SF4-207ENST00000495749 ITPRIPQ8IWB1 547 aa11.58□□□□□ -0.56
TM9SF4-207ENST00000495749 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
TM9SF4-207ENST00000495749 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
TM9SF4-207ENST00000495749 NOB1Q9ULX3 412 aaKnown RBP11.57□□□□□ -0.56
TM9SF4-207ENST00000495749 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
TM9SF4-207ENST00000495749 KRT24Q2M2I5 525 aa11.56□□□□□ -0.56
TM9SF4-207ENST00000495749 KCNA6P17658 529 aa11.56□□□□□ -0.56
TM9SF4-207ENST00000495749 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
TM9SF4-207ENST00000495749 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
TM9SF4-207ENST00000495749 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 RSPH6AQ9H0K4 717 aa11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 NSD2O96028 1365 aa11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 FER1L4A9Z1Z3 1794 aa11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
TM9SF4-207ENST00000495749 MCM10Q7L590 875 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 FCHSD2O94868 740 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 TRIM27P14373 513 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 IL13P35225 146 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 ZKSCAN2Q63HK3 967 aa11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 DZIP1LQ8IYY4 767 aaKnown RBP11.54□□□□□ -0.56
TM9SF4-207ENST00000495749 FOXO3O43524 673 aa11.53□□□□□ -0.56
TM9SF4-207ENST00000495749 BECN1Q14457 450 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms