RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 MINK1Q8N4C8 1332 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-218ENST00000495588 FDX1P10109 184 aa9.88□□□□□ -0.83
GAPVD1-218ENST00000495588 NNTQ13423 1086 aa9.88□□□□□ -0.83
GAPVD1-218ENST00000495588 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
GAPVD1-218ENST00000495588 PTPRNQ16849 979 aa9.87□□□□□ -0.83
GAPVD1-218ENST00000495588 PURBQ96QR8 312 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-218ENST00000495588 FAM217BQ9NTX9 383 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-218ENST00000495588 VARSP26640 1264 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-218ENST00000495588 MPNDQ8N594 471 aa9.86□□□□□ -0.83
GAPVD1-218ENST00000495588 KRI1Q8N9T8 703 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-218ENST00000495588 BAP1Q92560 729 aa9.86□□□□□ -0.83
GAPVD1-218ENST00000495588 EVA1BQ9NVM1 165 aa9.86□□□□□ -0.83
GAPVD1-218ENST00000495588 MROH2BQ7Z745 1585 aa9.85□□□□□ -0.83
GAPVD1-218ENST00000495588 BAZ1AQ9NRL2 1556 aaPredicted RBP9.85□□□□□ -0.83
GAPVD1-218ENST00000495588 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
GAPVD1-218ENST00000495588 ADH1CP00326 375 aa9.85□□□□□ -0.83
GAPVD1-218ENST00000495588 VSIG8P0DPA2 414 aa9.85□□□□□ -0.83
GAPVD1-218ENST00000495588 SMARCA4P51532 1647 aa9.85□□□□□ -0.83
GAPVD1-218ENST00000495588 EIF4G1Q04637 1599 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-218ENST00000495588 WDR4P57081 412 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-218ENST00000495588 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
GAPVD1-218ENST00000495588 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
GAPVD1-218ENST00000495588 TIMP2P16035 220 aa9.83□□□□□ -0.84
GAPVD1-218ENST00000495588 KCNH2Q12809 1159 aa9.83□□□□□ -0.84
GAPVD1-218ENST00000495588 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
GAPVD1-218ENST00000495588 SOBPA7XYQ1 873 aa9.82□□□□□ -0.84
GAPVD1-218ENST00000495588 SUZ12Q15022 739 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-218ENST00000495588 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-218ENST00000495588 FAM174AQ8TBP5 190 aa9.8□□□□□ -0.84
GAPVD1-218ENST00000495588 MAN1A2O60476 641 aa9.79□□□□□ -0.84
GAPVD1-218ENST00000495588 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
GAPVD1-218ENST00000495588 KCNMA1Q12791 1236 aa9.78□□□□□ -0.84
GAPVD1-218ENST00000495588 SPDYE5A6NIY4 337 aa9.77□□□□□ -0.85
GAPVD1-218ENST00000495588 DESI1Q6ICB0 168 aa9.77□□□□□ -0.85
GAPVD1-218ENST00000495588 WIZO95785 1651 aa9.77□□□□□ -0.85
GAPVD1-218ENST00000495588 SUPT5HO00267 1087 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-218ENST00000495588 MTMR2Q13614 643 aa9.76□□□□□ -0.85
GAPVD1-218ENST00000495588 KCTD17Q8N5Z5 321 aa9.76□□□□□ -0.85
GAPVD1-218ENST00000495588 SPIRE2Q8WWL2 714 aa9.76□□□□□ -0.85
GAPVD1-218ENST00000495588 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-218ENST00000495588 UPP2O95045 317 aa9.75□□□□□ -0.85
GAPVD1-218ENST00000495588 ZIC2O95409 532 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-218ENST00000495588 CTHP32929 405 aa9.75□□□□□ -0.85
GAPVD1-218ENST00000495588 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
GAPVD1-218ENST00000495588 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
GAPVD1-218ENST00000495588 CC2D2AQ9P2K1 1620 aa9.74□□□□□ -0.85
GAPVD1-218ENST00000495588 NDUFV2P19404 249 aa9.74□□□□□ -0.85
GAPVD1-218ENST00000495588 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
GAPVD1-218ENST00000495588 PEG3Q9GZU2 1588 aa9.73□□□□□ -0.85
GAPVD1-218ENST00000495588 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
GAPVD1-218ENST00000495588 CDK15Q96Q40 435 aa9.73□□□□□ -0.85
GAPVD1-218ENST00000495588 ZFAND3Q9H8U3 227 aa9.73□□□□□ -0.85
GAPVD1-218ENST00000495588 ATAD2BQ9ULI0 1458 aa9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 MOXD2PA6NHM9 499 aa9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 BMP2P12643 396 aa9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 NR5A1Q13285 461 aa9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 TMEM151AQ8N4L1 468 aa9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 ITPKCQ96DU7 683 aa9.72□□□□□ -0.85
GAPVD1-218ENST00000495588 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-218ENST00000495588 SMARCA2P51531 1590 aa9.71□□□□□ -0.86
GAPVD1-218ENST00000495588 GSK3AP49840 483 aa9.7□□□□□ -0.86
GAPVD1-218ENST00000495588 GDF11O95390 407 aa9.69□□□□□ -0.86
GAPVD1-218ENST00000495588 AGERQ15109 404 aa9.69□□□□□ -0.86
GAPVD1-218ENST00000495588 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
GAPVD1-218ENST00000495588 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
GAPVD1-218ENST00000495588 SPTLC1O15269 473 aa9.68□□□□□ -0.86
GAPVD1-218ENST00000495588 LYPD8Q6UX82 237 aa9.68□□□□□ -0.86
GAPVD1-218ENST00000495588 ZMYND10O75800 440 aa9.67□□□□□ -0.86
GAPVD1-218ENST00000495588 NR3C2P08235 984 aa9.67□□□□□ -0.86
GAPVD1-218ENST00000495588 RASSF7Q02833 373 aa9.67□□□□□ -0.86
GAPVD1-218ENST00000495588 NCAPD3P42695 1498 aa9.66□□□□□ -0.86
GAPVD1-218ENST00000495588 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-218ENST00000495588 MEIOBQ8N635 442 aa9.66□□□□□ -0.86
GAPVD1-218ENST00000495588 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-218ENST00000495588 BPHLQ86WA6 291 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-218ENST00000495588 DNMT3LQ9UJW3 386 aa9.65□□□□□ -0.86
GAPVD1-218ENST00000495588 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-218ENST00000495588 HMGXB3Q12766 1538 aa9.65□□□□□ -0.86
GAPVD1-218ENST00000495588 SOS2Q07890 1332 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-218ENST00000495588 GRM5P41594 1212 aa9.64□□□□□ -0.87
GAPVD1-218ENST00000495588 MAP10Q9P2G4 905 aa9.64□□□□□ -0.87
GAPVD1-218ENST00000495588 GJA5P36382 358 aa9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 CNTNAP3Q9BZ76 1288 aa9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
GAPVD1-218ENST00000495588 F12P00748 615 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-218ENST00000495588 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
GAPVD1-218ENST00000495588 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
GAPVD1-218ENST00000495588 KRT76Q01546 638 aa9.61□□□□□ -0.87
GAPVD1-218ENST00000495588 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
GAPVD1-218ENST00000495588 FSHRP23945 695 aa9.6□□□□□ -0.87
GAPVD1-218ENST00000495588 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-218ENST00000495588 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
GAPVD1-218ENST00000495588 ZBTB3Q9H5J0 574 aa9.6□□□□□ -0.87
GAPVD1-218ENST00000495588 GIGYF2Q6Y7W6 1299 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-218ENST00000495588 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms