RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.86
RPN1-206ENST00000495462 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
RPN1-206ENST00000495462 LRRC59Q96AG4 307 aaKnown RBP9.65□□□□□ -0.86
RPN1-206ENST00000495462 SOS2Q07890 1332 aaPredicted RBP9.64□□□□□ -0.87
RPN1-206ENST00000495462 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
RPN1-206ENST00000495462 ZNF772Q68DY9 489 aaPredicted RBP9.64□□□□□ -0.87
RPN1-206ENST00000495462 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
RPN1-206ENST00000495462 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
RPN1-206ENST00000495462 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
RPN1-206ENST00000495462 C7P10643 843 aa9.63□□□□□ -0.87
RPN1-206ENST00000495462 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
RPN1-206ENST00000495462 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
RPN1-206ENST00000495462 PIK3C2GO75747 1445 aa9.63□□□□□ -0.87
RPN1-206ENST00000495462 CDC42BPGQ6DT37 1551 aa9.63□□□□□ -0.87
RPN1-206ENST00000495462 RXRBP28702 533 aa9.62□□□□□ -0.87
RPN1-206ENST00000495462 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
RPN1-206ENST00000495462 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
RPN1-206ENST00000495462 TECPR2O15040 1411 aa9.62□□□□□ -0.87
RPN1-206ENST00000495462 LRPPRCP42704 1394 aaKnown RBP9.62□□□□□ -0.87
RPN1-206ENST00000495462 PXDNQ92626 1479 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 ESCO1Q5FWF5 840 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 CFAP70Q5T0N1 1121 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 LHX8Q68G74 356 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 RGS12O14924 1447 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 RAB3GAP2Q9H2M9 1393 aa9.61□□□□□ -0.87
RPN1-206ENST00000495462 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
RPN1-206ENST00000495462 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
RPN1-206ENST00000495462 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
RPN1-206ENST00000495462 FOXO3O43524 673 aa9.6□□□□□ -0.87
RPN1-206ENST00000495462 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
RPN1-206ENST00000495462 COL22A1Q8NFW1 1626 aaPredicted RBP9.6□□□□□ -0.87
RPN1-206ENST00000495462 PDAP1Q13442 181 aaKnown RBP9.59□□□□□ -0.87
RPN1-206ENST00000495462 IER5LQ5T953 404 aa9.59□□□□□ -0.87
RPN1-206ENST00000495462 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
RPN1-206ENST00000495462 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
RPN1-206ENST00000495462 FMN2Q9NZ56 1722 aa9.59□□□□□ -0.87
RPN1-206ENST00000495462 PSEN1P49768 467 aa9.58□□□□□ -0.88
RPN1-206ENST00000495462 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
RPN1-206ENST00000495462 MYOM2P54296 1465 aa9.58□□□□□ -0.88
RPN1-206ENST00000495462 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
RPN1-206ENST00000495462 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
RPN1-206ENST00000495462 SAFB2Q14151 953 aaKnown RBP eCLIP9.57□□□□□ -0.88
RPN1-206ENST00000495462 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
RPN1-206ENST00000495462 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
RPN1-206ENST00000495462 RBM6P78332 1123 aaKnown RBP9.56□□□□□ -0.88
RPN1-206ENST00000495462 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
RPN1-206ENST00000495462 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
RPN1-206ENST00000495462 USP21Q9UK80 565 aa9.56□□□□□ -0.88
RPN1-206ENST00000495462 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
RPN1-206ENST00000495462 ADGRB1O14514 1584 aa9.55□□□□□ -0.88
RPN1-206ENST00000495462 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
RPN1-206ENST00000495462 ATRNO75882 1429 aa9.55□□□□□ -0.88
RPN1-206ENST00000495462 SPATA31A3Q5VYP0 1347 aa9.55□□□□□ -0.88
RPN1-206ENST00000495462 POTEFA5A3E0 1075 aa9.54□□□□□ -0.88
RPN1-206ENST00000495462 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
RPN1-206ENST00000495462 KDM2AQ9Y2K7 1162 aa9.54□□□□□ -0.88
RPN1-206ENST00000495462 MARF1Q9Y4F3 1742 aaKnown RBP9.53□□□□□ -0.88
RPN1-206ENST00000495462 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
RPN1-206ENST00000495462 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
RPN1-206ENST00000495462 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
RPN1-206ENST00000495462 KRT28Q7Z3Y7 464 aa9.53□□□□□ -0.88
RPN1-206ENST00000495462 CABLES1Q8TDN4 633 aa9.53□□□□□ -0.88
RPN1-206ENST00000495462 KIF1AQ12756 1690 aa9.52□□□□□ -0.89
RPN1-206ENST00000495462 PMFBP1Q8TBY8 1022 aa9.52□□□□□ -0.89
RPN1-206ENST00000495462 DCAF11Q8TEB1 546 aa9.52□□□□□ -0.89
RPN1-206ENST00000495462 HIRIP3Q9BW71 556 aaPredicted RBP9.52□□□□□ -0.89
RPN1-206ENST00000495462 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
RPN1-206ENST00000495462 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.89
RPN1-206ENST00000495462 TRAK1Q9UPV9 953 aa9.52□□□□□ -0.89
RPN1-206ENST00000495462 PRR36Q9H6K5 1346 aa9.52□□□□□ -0.89
RPN1-206ENST00000495462 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
RPN1-206ENST00000495462 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
RPN1-206ENST00000495462 SLIT2O94813 1529 aa9.51□□□□□ -0.89
RPN1-206ENST00000495462 GLI3P10071 1580 aa9.5□□□□□ -0.89
RPN1-206ENST00000495462 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
RPN1-206ENST00000495462 ABCA3Q99758 1704 aa9.5□□□□□ -0.89
RPN1-206ENST00000495462 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
RPN1-206ENST00000495462 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
RPN1-206ENST00000495462 TNS3Q68CZ2 1445 aa9.49□□□□□ -0.89
RPN1-206ENST00000495462 SEC24BO95487 1268 aa9.49□□□□□ -0.89
RPN1-206ENST00000495462 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
RPN1-206ENST00000495462 POGKQ9P215 609 aa9.49□□□□□ -0.89
RPN1-206ENST00000495462 TRPM3Q9HCF6 1732 aaPredicted RBP9.48□□□□□ -0.89
RPN1-206ENST00000495462 RALGAPBQ86X10 1494 aa9.48□□□□□ -0.89
RPN1-206ENST00000495462 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
RPN1-206ENST00000495462 UNC5CLQ8IV45 518 aa9.48□□□□□ -0.89
RPN1-206ENST00000495462 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.48□□□□□ -0.89
RPN1-206ENST00000495462 EP400Q96L91 3159 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 PSME1Q06323 249 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 PLSCR2Q9NRY7 297 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 PLCH1Q4KWH8 1693 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
RPN1-206ENST00000495462 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
RPN1-206ENST00000495462 SBNO1A3KN83 1393 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
RPN1-206ENST00000495462 ANKARQ7Z5J8 1434 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms