RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
SCAP-213ENST00000494938 FAM83GA6ND36 823 aa20.26■□□□□ 0.83
SCAP-213ENST00000494938 RXRBP28702 533 aa20.26■□□□□ 0.83
SCAP-213ENST00000494938 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
SCAP-213ENST00000494938 TRPM3Q9HCF6 1732 aaPredicted RBP20.26■□□□□ 0.83
SCAP-213ENST00000494938 USP47Q96K76 1375 aa20.25■□□□□ 0.83
SCAP-213ENST00000494938 ABTB2Q8N961 1025 aa20.25■□□□□ 0.83
SCAP-213ENST00000494938 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
SCAP-213ENST00000494938 TOPAZ1Q8N9V7 1692 aa20.25■□□□□ 0.83
SCAP-213ENST00000494938 SLC24A1O60721 1099 aa20.24■□□□□ 0.83
SCAP-213ENST00000494938 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
SCAP-213ENST00000494938 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
SCAP-213ENST00000494938 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
SCAP-213ENST00000494938 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
SCAP-213ENST00000494938 USP6P35125 1406 aa20.22■□□□□ 0.83
SCAP-213ENST00000494938 RBM6P78332 1123 aaKnown RBP20.22■□□□□ 0.83
SCAP-213ENST00000494938 UNC5CLQ8IV45 518 aa20.22■□□□□ 0.83
SCAP-213ENST00000494938 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
SCAP-213ENST00000494938 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
SCAP-213ENST00000494938 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
SCAP-213ENST00000494938 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
SCAP-213ENST00000494938 ALS2Q96Q42 1657 aa20.2■□□□□ 0.82
SCAP-213ENST00000494938 TTC21BQ7Z4L5 1316 aa20.2■□□□□ 0.82
SCAP-213ENST00000494938 SLIT2O94813 1529 aa20.19■□□□□ 0.82
SCAP-213ENST00000494938 NLRP13Q86W25 1043 aa20.19■□□□□ 0.82
SCAP-213ENST00000494938 ATRNO75882 1429 aa20.19■□□□□ 0.82
SCAP-213ENST00000494938 TMF1P82094 1093 aa20.18■□□□□ 0.82
SCAP-213ENST00000494938 NLRP6P59044 892 aa20.17■□□□□ 0.82
SCAP-213ENST00000494938 USP19O94966 1318 aa20.17■□□□□ 0.82
SCAP-213ENST00000494938 GCP02774 474 aa20.16■□□□□ 0.82
SCAP-213ENST00000494938 ZC3H6P61129 1189 aaKnown RBP20.16■□□□□ 0.82
SCAP-213ENST00000494938 GJD4Q96KN9 370 aaPredicted RBP20.16■□□□□ 0.82
SCAP-213ENST00000494938 KTN1Q86UP2 1357 aaKnown RBP20.16■□□□□ 0.82
SCAP-213ENST00000494938 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
SCAP-213ENST00000494938 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
SCAP-213ENST00000494938 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
SCAP-213ENST00000494938 PRDM11Q9NQV5 511 aa20.14■□□□□ 0.81
SCAP-213ENST00000494938 TTC21AQ8NDW8 1320 aa20.13■□□□□ 0.81
SCAP-213ENST00000494938 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
SCAP-213ENST00000494938 VPS72Q15906 364 aa20.13■□□□□ 0.81
SCAP-213ENST00000494938 HDGFL2Q7Z4V5 671 aaPredicted RBP20.13■□□□□ 0.81
SCAP-213ENST00000494938 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
SCAP-213ENST00000494938 ZRANB1Q9UGI0 708 aa20.12■□□□□ 0.81
SCAP-213ENST00000494938 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
SCAP-213ENST00000494938 HSPA5P11021 654 aaKnown RBP20.11■□□□□ 0.81
SCAP-213ENST00000494938 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAP-213ENST00000494938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAP-213ENST00000494938 CDCA8Q53HL2 280 aa20.1■□□□□ 0.81
SCAP-213ENST00000494938 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
SCAP-213ENST00000494938 CPDO75976 1380 aa20.09■□□□□ 0.81
SCAP-213ENST00000494938 NME9Q86XW9 330 aa20.09■□□□□ 0.81
SCAP-213ENST00000494938 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
SCAP-213ENST00000494938 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
SCAP-213ENST00000494938 MARF1Q9Y4F3 1742 aaKnown RBP20.08■□□□□ 0.81
SCAP-213ENST00000494938 RGS12O14924 1447 aa20.08■□□□□ 0.8
SCAP-213ENST00000494938 ONECUT3O60422 494 aaPredicted RBP20.07■□□□□ 0.8
SCAP-213ENST00000494938 CRYBG1Q9Y4K1 1723 aa20.07■□□□□ 0.8
SCAP-213ENST00000494938 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
SCAP-213ENST00000494938 EDC4Q6P2E9 1401 aaKnown RBP20.05■□□□□ 0.8
SCAP-213ENST00000494938 CCDC9Q9Y3X0 531 aaKnown RBP20.05■□□□□ 0.8
SCAP-213ENST00000494938 ARHGEF25Q86VW2 580 aa20.04■□□□□ 0.8
SCAP-213ENST00000494938 KCNH5Q8NCM2 988 aa20.04■□□□□ 0.8
SCAP-213ENST00000494938 SPATA31A5Q5VU36 1347 aa20.03■□□□□ 0.8
SCAP-213ENST00000494938 SPATA31A7Q8IWB4 1347 aa20.03■□□□□ 0.8
SCAP-213ENST00000494938 ANKRD36BQ8N2N9 1353 aa20.03■□□□□ 0.8
SCAP-213ENST00000494938 SLIT3O75094 1523 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
SCAP-213ENST00000494938 SOX12O15370 315 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 EVA1CP58658 441 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 STRN4Q9NRL3 753 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 AXIN2Q9Y2T1 843 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 PIK3C2AO00443 1686 aa20.02■□□□□ 0.8
SCAP-213ENST00000494938 COL14A1Q05707 1796 aaKnown RBP20.02■□□□□ 0.8
SCAP-213ENST00000494938 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.79
SCAP-213ENST00000494938 AKAP12Q02952 1782 aa20.01■□□□□ 0.79
SCAP-213ENST00000494938 NRKQ7Z2Y5 1582 aa20.01■□□□□ 0.79
SCAP-213ENST00000494938 AATKQ6ZMQ8 1374 aa20.01■□□□□ 0.79
SCAP-213ENST00000494938 SEPT12Q8IYM1 358 aa20.01■□□□□ 0.79
SCAP-213ENST00000494938 UPF1Q92900 1129 aaKnown RBP eCLIP20.01■□□□□ 0.79
SCAP-213ENST00000494938 GLI3P10071 1580 aa20■□□□□ 0.79
SCAP-213ENST00000494938 ZBTB7CA1YPR0 619 aa20■□□□□ 0.79
SCAP-213ENST00000494938 LARP1Q6PKG0 1096 aaKnown RBP20■□□□□ 0.79
SCAP-213ENST00000494938 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
SCAP-213ENST00000494938 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.99■□□□□ 0.79
SCAP-213ENST00000494938 FAM98CQ17RN3 349 aaKnown RBP19.99■□□□□ 0.79
SCAP-213ENST00000494938 SPATA31A1Q5TZJ5 1347 aa19.99■□□□□ 0.79
SCAP-213ENST00000494938 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
SCAP-213ENST00000494938 PLCH1Q4KWH8 1693 aa19.98■□□□□ 0.79
SCAP-213ENST00000494938 FYB1O15117 783 aa19.98■□□□□ 0.79
SCAP-213ENST00000494938 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
SCAP-213ENST00000494938 POLR3GLQ9BT43 218 aa19.96■□□□□ 0.79
SCAP-213ENST00000494938 NRAPQ86VF7 1730 aa19.95■□□□□ 0.78
SCAP-213ENST00000494938 OVOS2A0A0J9YW53 1432 aa19.94■□□□□ 0.78
SCAP-213ENST00000494938 OVOS2Q6IE36 1432 aa19.94■□□□□ 0.78
SCAP-213ENST00000494938 FBLN1P23142 703 aa19.94■□□□□ 0.78
SCAP-213ENST00000494938 COG3Q96JB2 828 aa19.94■□□□□ 0.78
SCAP-213ENST00000494938 NFAT5O94916 1531 aa19.93■□□□□ 0.78
SCAP-213ENST00000494938 GGNBP2Q9H3C7 697 aa19.93■□□□□ 0.78
SCAP-213ENST00000494938 USP35Q9P2H5 1018 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms