RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PPP4R2Q9NY27 417 aa14.07□□□□□ -0.16
PRPF4B-209ENST00000494674 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
PRPF4B-209ENST00000494674 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
PRPF4B-209ENST00000494674 PNPLA6Q8IY17 1366 aa14.06□□□□□ -0.16
PRPF4B-209ENST00000494674 DUSP27Q5VZP5 1158 aa14.06□□□□□ -0.16
PRPF4B-209ENST00000494674 TRMT2AQ8IZ69 625 aaKnown RBP14.06□□□□□ -0.16
PRPF4B-209ENST00000494674 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
PRPF4B-209ENST00000494674 NALCNQ8IZF0 1738 aa14.05□□□□□ -0.16
PRPF4B-209ENST00000494674 RRP1P56182 461 aaKnown RBP14.05□□□□□ -0.16
PRPF4B-209ENST00000494674 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
PRPF4B-209ENST00000494674 AMOTL2Q9Y2J4 779 aa14.05□□□□□ -0.16
PRPF4B-209ENST00000494674 PIK3R4Q99570 1358 aa14.05□□□□□ -0.16
PRPF4B-209ENST00000494674 FMN2Q9NZ56 1722 aa14.05□□□□□ -0.16
PRPF4B-209ENST00000494674 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
PRPF4B-209ENST00000494674 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
PRPF4B-209ENST00000494674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF4B-209ENST00000494674 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
PRPF4B-209ENST00000494674 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
PRPF4B-209ENST00000494674 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
PRPF4B-209ENST00000494674 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
PRPF4B-209ENST00000494674 NME9Q86XW9 330 aa14.01□□□□□ -0.17
PRPF4B-209ENST00000494674 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
PRPF4B-209ENST00000494674 PLEKHG3A1L390 1219 aa14.01□□□□□ -0.17
PRPF4B-209ENST00000494674 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
PRPF4B-209ENST00000494674 AATKQ6ZMQ8 1374 aa14□□□□□ -0.17
PRPF4B-209ENST00000494674 USP6P35125 1406 aa14□□□□□ -0.17
PRPF4B-209ENST00000494674 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
PRPF4B-209ENST00000494674 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
PRPF4B-209ENST00000494674 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
PRPF4B-209ENST00000494674 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
PRPF4B-209ENST00000494674 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
PRPF4B-209ENST00000494674 OVOS2A0A0J9YW53 1432 aa13.99□□□□□ -0.17
PRPF4B-209ENST00000494674 OVOS2Q6IE36 1432 aa13.99□□□□□ -0.17
PRPF4B-209ENST00000494674 KCNA6P17658 529 aa13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 ACEP12821 1306 aa13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 FBLN1P23142 703 aa13.98□□□□□ -0.17
PRPF4B-209ENST00000494674 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.176e-7■■■■□ 26.6
PRPF4B-209ENST00000494674 ANKARQ7Z5J8 1434 aa13.97□□□□□ -0.17
PRPF4B-209ENST00000494674 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
PRPF4B-209ENST00000494674 E9PSI1 815 aa13.97□□□□□ -0.17
PRPF4B-209ENST00000494674 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
PRPF4B-209ENST00000494674 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
PRPF4B-209ENST00000494674 PIK3C2AO00443 1686 aa13.96□□□□□ -0.17
PRPF4B-209ENST00000494674 PEAK1Q9H792 1746 aa13.96□□□□□ -0.17
PRPF4B-209ENST00000494674 RRP7AQ9Y3A4 280 aaKnown RBP13.96□□□□□ -0.17
PRPF4B-209ENST00000494674 TTC21BQ7Z4L5 1316 aa13.96□□□□□ -0.17
PRPF4B-209ENST00000494674 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
PRPF4B-209ENST00000494674 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
PRPF4B-209ENST00000494674 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
PRPF4B-209ENST00000494674 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
PRPF4B-209ENST00000494674 EMILIN1Q9Y6C2 1016 aa13.95□□□□□ -0.18
PRPF4B-209ENST00000494674 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 PLIN1O60240 522 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 COG3Q96JB2 828 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 RGPD1P0DJD0 1748 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 DLG5Q8TDM6 1919 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 USP31Q70CQ4 1352 aa13.93□□□□□ -0.18
PRPF4B-209ENST00000494674 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
PRPF4B-209ENST00000494674 IL13P35225 146 aa13.91□□□□□ -0.18
PRPF4B-209ENST00000494674 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
PRPF4B-209ENST00000494674 ADGRL3Q9HAR2 1447 aa13.91□□□□□ -0.18
PRPF4B-209ENST00000494674 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
PRPF4B-209ENST00000494674 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
PRPF4B-209ENST00000494674 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
PRPF4B-209ENST00000494674 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
PRPF4B-209ENST00000494674 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
PRPF4B-209ENST00000494674 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
PRPF4B-209ENST00000494674 FCHSD2O94868 740 aa13.89□□□□□ -0.19
PRPF4B-209ENST00000494674 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
PRPF4B-209ENST00000494674 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
PRPF4B-209ENST00000494674 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
PRPF4B-209ENST00000494674 MAPK8IP3Q9UPT6 1336 aa13.88□□□□□ -0.19
PRPF4B-209ENST00000494674 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
PRPF4B-209ENST00000494674 BCAR3O75815 825 aa13.86□□□□□ -0.19
PRPF4B-209ENST00000494674 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
PRPF4B-209ENST00000494674 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
PRPF4B-209ENST00000494674 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
PRPF4B-209ENST00000494674 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
PRPF4B-209ENST00000494674 IL16Q14005 1332 aa13.84□□□□□ -0.19
PRPF4B-209ENST00000494674 HMOX1P09601 288 aa13.84□□□□□ -0.19
PRPF4B-209ENST00000494674 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.19
PRPF4B-209ENST00000494674 RIPK4P57078 832 aa13.83□□□□□ -0.2
PRPF4B-209ENST00000494674 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
PRPF4B-209ENST00000494674 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
PRPF4B-209ENST00000494674 LTN1O94822 1766 aa13.83□□□□□ -0.2
PRPF4B-209ENST00000494674 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
PRPF4B-209ENST00000494674 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
PRPF4B-209ENST00000494674 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
PRPF4B-209ENST00000494674 MAP3K19Q56UN5 1328 aa13.82□□□□□ -0.2
PRPF4B-209ENST00000494674 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
PRPF4B-209ENST00000494674 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms