RNA–Protein interactions for RNA: ENST00000494664.5

TIMMDC1-208, Transcript of translocase of inner mitochondrial membrane domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMMDC1, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1-208ENST00000494664 NHSL1Q5SYE7 1610 aa16.07■□□□□ 0.16
TIMMDC1-208ENST00000494664 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
TIMMDC1-208ENST00000494664 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
TIMMDC1-208ENST00000494664 PXDNQ92626 1479 aa16.07■□□□□ 0.16
TIMMDC1-208ENST00000494664 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
TIMMDC1-208ENST00000494664 PER1O15534 1290 aaPredicted RBP16.06■□□□□ 0.16
TIMMDC1-208ENST00000494664 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
TIMMDC1-208ENST00000494664 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
TIMMDC1-208ENST00000494664 PSME1Q06323 249 aa16.04■□□□□ 0.16
TIMMDC1-208ENST00000494664 NPHP3Q7Z494 1330 aa16.04■□□□□ 0.16
TIMMDC1-208ENST00000494664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■□□□□ 9.3
TIMMDC1-208ENST00000494664 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
TIMMDC1-208ENST00000494664 AHDC1Q5TGY3 1603 aaPredicted RBP16.03■□□□□ 0.16
TIMMDC1-208ENST00000494664 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
TIMMDC1-208ENST00000494664 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
TIMMDC1-208ENST00000494664 PIK3C2AO00443 1686 aa16.01■□□□□ 0.15
TIMMDC1-208ENST00000494664 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
TIMMDC1-208ENST00000494664 TTC21BQ7Z4L5 1316 aa16.01■□□□□ 0.15
TIMMDC1-208ENST00000494664 FANCIQ9NVI1 1328 aa16.01■□□□□ 0.15
TIMMDC1-208ENST00000494664 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
TIMMDC1-208ENST00000494664 CCER2I3L3R5 266 aa16■□□□□ 0.15
TIMMDC1-208ENST00000494664 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
TIMMDC1-208ENST00000494664 NME9Q86XW9 330 aa16■□□□□ 0.15
TIMMDC1-208ENST00000494664 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
TIMMDC1-208ENST00000494664 COL16A1Q07092 1604 aaPredicted RBP16■□□□□ 0.15
TIMMDC1-208ENST00000494664 PHLPP1O60346 1717 aa16■□□□□ 0.15
TIMMDC1-208ENST00000494664 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
TIMMDC1-208ENST00000494664 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
TIMMDC1-208ENST00000494664 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
TIMMDC1-208ENST00000494664 FYB1O15117 783 aa15.98■□□□□ 0.15
TIMMDC1-208ENST00000494664 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
TIMMDC1-208ENST00000494664 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
TIMMDC1-208ENST00000494664 ERICH6Q7L0X2 663 aa15.98■□□□□ 0.15
TIMMDC1-208ENST00000494664 TNS3Q68CZ2 1445 aa15.97■□□□□ 0.15
TIMMDC1-208ENST00000494664 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
TIMMDC1-208ENST00000494664 MARF1Q9Y4F3 1742 aaKnown RBP15.97■□□□□ 0.15
TIMMDC1-208ENST00000494664 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
TIMMDC1-208ENST00000494664 CGNL1Q0VF96 1302 aa15.97■□□□□ 0.15
TIMMDC1-208ENST00000494664 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
TIMMDC1-208ENST00000494664 SPATA31A3Q5VYP0 1347 aa15.96■□□□□ 0.15
TIMMDC1-208ENST00000494664 MSH5O43196 834 aa15.96■□□□□ 0.15
TIMMDC1-208ENST00000494664 LMOD2Q6P5Q4 547 aa15.96■□□□□ 0.15
TIMMDC1-208ENST00000494664 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
TIMMDC1-208ENST00000494664 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
TIMMDC1-208ENST00000494664 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
TIMMDC1-208ENST00000494664 BRD4O60885 1362 aaPredicted RBP15.94■□□□□ 0.14
TIMMDC1-208ENST00000494664 HSPA1LP34931 641 aa15.94■□□□□ 0.14
TIMMDC1-208ENST00000494664 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
TIMMDC1-208ENST00000494664 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
TIMMDC1-208ENST00000494664 MED1Q15648 1581 aaPredicted RBP15.93■□□□□ 0.14
TIMMDC1-208ENST00000494664 ANKRD26Q9UPS8 1709 aa15.93■□□□□ 0.14
TIMMDC1-208ENST00000494664 NLRP6P59044 892 aa15.92■□□□□ 0.14
TIMMDC1-208ENST00000494664 ANP32CO43423 234 aa15.92■□□□□ 0.14
TIMMDC1-208ENST00000494664 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
TIMMDC1-208ENST00000494664 CRYBG1Q9Y4K1 1723 aa15.92■□□□□ 0.14
TIMMDC1-208ENST00000494664 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
TIMMDC1-208ENST00000494664 FBLN1P23142 703 aa15.91■□□□□ 0.14
TIMMDC1-208ENST00000494664 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
TIMMDC1-208ENST00000494664 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
TIMMDC1-208ENST00000494664 USP31Q70CQ4 1352 aa15.91■□□□□ 0.14
TIMMDC1-208ENST00000494664 ARHGEF10O15013 1369 aa15.9■□□□□ 0.14
TIMMDC1-208ENST00000494664 NSD2O96028 1365 aa15.9■□□□□ 0.14
TIMMDC1-208ENST00000494664 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
TIMMDC1-208ENST00000494664 SOX12O15370 315 aa15.9■□□□□ 0.14
TIMMDC1-208ENST00000494664 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
TIMMDC1-208ENST00000494664 FBXO41Q8TF61 875 aa15.9■□□□□ 0.14
TIMMDC1-208ENST00000494664 COG3Q96JB2 828 aa15.89■□□□□ 0.13
TIMMDC1-208ENST00000494664 PHRF1Q9P1Y6 1649 aaKnown RBP15.89■□□□□ 0.13
TIMMDC1-208ENST00000494664 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
TIMMDC1-208ENST00000494664 USP19O94966 1318 aa15.89■□□□□ 0.13
TIMMDC1-208ENST00000494664 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
TIMMDC1-208ENST00000494664 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
TIMMDC1-208ENST00000494664 SLIT3O75094 1523 aa15.88■□□□□ 0.13
TIMMDC1-208ENST00000494664 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
TIMMDC1-208ENST00000494664 MORC1Q86VD1 984 aa15.87■□□□□ 0.13
TIMMDC1-208ENST00000494664 PRKRIP1Q9H875 184 aaPredicted RBP15.87■□□□□ 0.13
TIMMDC1-208ENST00000494664 NFAT5O94916 1531 aa15.87■□□□□ 0.13
TIMMDC1-208ENST00000494664 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
TIMMDC1-208ENST00000494664 GCP02774 474 aa15.84■□□□□ 0.13
TIMMDC1-208ENST00000494664 JCADQ9P266 1359 aa15.84■□□□□ 0.13
TIMMDC1-208ENST00000494664 RRS1Q15050 365 aaKnown RBP15.84■□□□□ 0.13
TIMMDC1-208ENST00000494664 ERICH6BQ5W0A0 696 aa15.84■□□□□ 0.13
TIMMDC1-208ENST00000494664 ZC3H6P61129 1189 aaKnown RBP15.82■□□□□ 0.12
TIMMDC1-208ENST00000494664 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
TIMMDC1-208ENST00000494664 LTN1O94822 1766 aa15.81■□□□□ 0.12
TIMMDC1-208ENST00000494664 PEAK1Q9H792 1746 aa15.81■□□□□ 0.12
TIMMDC1-208ENST00000494664 MAP2P11137 1827 aaKnown RBP15.81■□□□□ 0.12
TIMMDC1-208ENST00000494664 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
TIMMDC1-208ENST00000494664 RALBP1Q15311 655 aa15.81■□□□□ 0.12
TIMMDC1-208ENST00000494664 LRP6O75581 1613 aa15.8■□□□□ 0.12
TIMMDC1-208ENST00000494664 MAP3K19Q56UN5 1328 aa15.8■□□□□ 0.12
TIMMDC1-208ENST00000494664 AATKQ6ZMQ8 1374 aa15.8■□□□□ 0.12
TIMMDC1-208ENST00000494664 POLKQ9UBT6 870 aa15.8■□□□□ 0.12
TIMMDC1-208ENST00000494664 KIAA0232Q92628 1395 aa15.8■□□□□ 0.12
TIMMDC1-208ENST00000494664 NUTM2BA6NNL0 878 aaPredicted RBP15.79■□□□□ 0.12
TIMMDC1-208ENST00000494664 NUTM2EB1AL46 878 aaPredicted RBP15.79■□□□□ 0.12
TIMMDC1-208ENST00000494664 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
TIMMDC1-208ENST00000494664 KCNH5Q8NCM2 988 aa15.79■□□□□ 0.12
TIMMDC1-208ENST00000494664 HAP1P54257 671 aaPredicted RBP15.79■□□□□ 0.12
TIMMDC1-208ENST00000494664 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms