RNA–Protein interactions for RNA: ENST00000494042.3

RN7SL416P-201, Transcript of RNA, 7SL, cytoplasmic 416, pseudogene, humanhuman

BASIC

Gene RN7SL416P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL416P-201ENST00000494042 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
RN7SL416P-201ENST00000494042 SLC12A5Q9H2X9 1139 aa11.19□□□□□ -0.62
RN7SL416P-201ENST00000494042 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
RN7SL416P-201ENST00000494042 EP400Q96L91 3159 aa11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 ATP7BP35670 1465 aa11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
RN7SL416P-201ENST00000494042 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
RN7SL416P-201ENST00000494042 CABP1Q9NZU7 370 aa11.17□□□□□ -0.62
RN7SL416P-201ENST00000494042 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
RN7SL416P-201ENST00000494042 ANKARQ7Z5J8 1434 aa11.17□□□□□ -0.62
RN7SL416P-201ENST00000494042 TNS1Q9HBL0 1735 aaKnown RBP11.16□□□□□ -0.62
RN7SL416P-201ENST00000494042 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
RN7SL416P-201ENST00000494042 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
RN7SL416P-201ENST00000494042 ESCO1Q5FWF5 840 aa11.16□□□□□ -0.62
RN7SL416P-201ENST00000494042 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
RN7SL416P-201ENST00000494042 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
RN7SL416P-201ENST00000494042 FNBP4Q8N3X1 1017 aaPredicted RBP11.15□□□□□ -0.62
RN7SL416P-201ENST00000494042 SLIT2O94813 1529 aa11.14□□□□□ -0.63
RN7SL416P-201ENST00000494042 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
RN7SL416P-201ENST00000494042 BLMP54132 1417 aaPredicted RBP11.14□□□□□ -0.63
RN7SL416P-201ENST00000494042 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
RN7SL416P-201ENST00000494042 CRYBG1Q9Y4K1 1723 aa11.14□□□□□ -0.63
RN7SL416P-201ENST00000494042 POLR3AO14802 1390 aaPredicted RBP11.14□□□□□ -0.63
RN7SL416P-201ENST00000494042 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
RN7SL416P-201ENST00000494042 FOXO3O43524 673 aa11.12□□□□□ -0.63
RN7SL416P-201ENST00000494042 DEFB132Q7Z7B7 95 aa11.12□□□□□ -0.63
RN7SL416P-201ENST00000494042 GJD4Q96KN9 370 aaPredicted RBP11.12□□□□□ -0.63
RN7SL416P-201ENST00000494042 PANK3Q9H999 370 aa11.12□□□□□ -0.63
RN7SL416P-201ENST00000494042 NINLQ9Y2I6 1382 aa11.12□□□□□ -0.63
RN7SL416P-201ENST00000494042 ACEP12821 1306 aa11.11□□□□□ -0.63
RN7SL416P-201ENST00000494042 DDX10Q13206 875 aaKnown RBP11.11□□□□□ -0.63
RN7SL416P-201ENST00000494042 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
RN7SL416P-201ENST00000494042 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
RN7SL416P-201ENST00000494042 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
RN7SL416P-201ENST00000494042 TNS3Q68CZ2 1445 aa11.1□□□□□ -0.63
RN7SL416P-201ENST00000494042 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
RN7SL416P-201ENST00000494042 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
RN7SL416P-201ENST00000494042 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
RN7SL416P-201ENST00000494042 ANKRD36BQ8N2N9 1353 aa11.1□□□□□ -0.63
RN7SL416P-201ENST00000494042 COL14A1Q05707 1796 aaKnown RBP11.1□□□□□ -0.63
RN7SL416P-201ENST00000494042 A0A0G2JS52 829 aa11.09□□□□□ -0.63
RN7SL416P-201ENST00000494042 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
RN7SL416P-201ENST00000494042 MYT1Q01538 1121 aa11.09□□□□□ -0.63
RN7SL416P-201ENST00000494042 TMC1Q8TDI8 760 aa11.09□□□□□ -0.63
RN7SL416P-201ENST00000494042 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
RN7SL416P-201ENST00000494042 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
RN7SL416P-201ENST00000494042 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
RN7SL416P-201ENST00000494042 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
RN7SL416P-201ENST00000494042 CCDC9Q9Y3X0 531 aaKnown RBP11.08□□□□□ -0.64
RN7SL416P-201ENST00000494042 THSD7AQ9UPZ6 1657 aa11.08□□□□□ -0.64
RN7SL416P-201ENST00000494042 ITSN1Q15811 1721 aa11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 SF3B2Q13435 895 aaKnown RBP11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 USP6P35125 1406 aa11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
RN7SL416P-201ENST00000494042 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 RREB1Q92766 1687 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 FYB1O15117 783 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 TERF2IPQ9NYB0 399 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 TTC21BQ7Z4L5 1316 aa11.06□□□□□ -0.64
RN7SL416P-201ENST00000494042 TOPAZ1Q8N9V7 1692 aa11.05□□□□□ -0.64
RN7SL416P-201ENST00000494042 LMOD2Q6P5Q4 547 aa11.05□□□□□ -0.64
RN7SL416P-201ENST00000494042 MYOM1P52179 1685 aa11.04□□□□□ -0.64
RN7SL416P-201ENST00000494042 NPC1L1Q9UHC9 1359 aa11.04□□□□□ -0.64
RN7SL416P-201ENST00000494042 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
RN7SL416P-201ENST00000494042 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
RN7SL416P-201ENST00000494042 BRD4O60885 1362 aaPredicted RBP11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 EDC4Q6P2E9 1401 aaKnown RBP11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 NSD3Q9BZ95 1437 aa11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
RN7SL416P-201ENST00000494042 PSME1Q06323 249 aa11.02□□□□□ -0.65
RN7SL416P-201ENST00000494042 FAM182BQ5T319 152 aa11.02□□□□□ -0.65
RN7SL416P-201ENST00000494042 KRT27Q7Z3Y8 459 aa11.02□□□□□ -0.65
RN7SL416P-201ENST00000494042 NME9Q86XW9 330 aa11.02□□□□□ -0.65
RN7SL416P-201ENST00000494042 VPS72Q15906 364 aa11.01□□□□□ -0.65
RN7SL416P-201ENST00000494042 CAMTA1Q9Y6Y1 1673 aa11.01□□□□□ -0.65
RN7SL416P-201ENST00000494042 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
RN7SL416P-201ENST00000494042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
RN7SL416P-201ENST00000494042 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
RN7SL416P-201ENST00000494042 TTC21AQ8NDW8 1320 aa11□□□□□ -0.65
RN7SL416P-201ENST00000494042 WNK3Q9BYP7 1800 aa11□□□□□ -0.65
RN7SL416P-201ENST00000494042 BAG6P46379 1132 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 USP19O94966 1318 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 OVOS2A0A0J9YW53 1432 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 OVOS2Q6IE36 1432 aa10.99□□□□□ -0.65
RN7SL416P-201ENST00000494042 FBLN1P23142 703 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms