RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
SGIP1-213ENST00000493564 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
SGIP1-213ENST00000493564 ITSN1Q15811 1721 aa13.31□□□□□ -0.28
SGIP1-213ENST00000493564 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
SGIP1-213ENST00000493564 RBM6P78332 1123 aaKnown RBP13.31□□□□□ -0.28
SGIP1-213ENST00000493564 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
SGIP1-213ENST00000493564 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
SGIP1-213ENST00000493564 TESK2Q96S53 571 aa13.3□□□□□ -0.28
SGIP1-213ENST00000493564 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
SGIP1-213ENST00000493564 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
SGIP1-213ENST00000493564 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
SGIP1-213ENST00000493564 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
SGIP1-213ENST00000493564 NLRP6P59044 892 aa13.28□□□□□ -0.28
SGIP1-213ENST00000493564 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
SGIP1-213ENST00000493564 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
SGIP1-213ENST00000493564 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
SGIP1-213ENST00000493564 NLRP13Q86W25 1043 aa13.27□□□□□ -0.29
SGIP1-213ENST00000493564 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
SGIP1-213ENST00000493564 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
SGIP1-213ENST00000493564 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.29
SGIP1-213ENST00000493564 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
SGIP1-213ENST00000493564 ATAD2Q6PL18 1390 aa13.27□□□□□ -0.29
SGIP1-213ENST00000493564 USP47Q96K76 1375 aa13.27□□□□□ -0.29
SGIP1-213ENST00000493564 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
SGIP1-213ENST00000493564 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
SGIP1-213ENST00000493564 USP6P35125 1406 aa13.26□□□□□ -0.29
SGIP1-213ENST00000493564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
SGIP1-213ENST00000493564 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
SGIP1-213ENST00000493564 ATRNO75882 1429 aa13.25□□□□□ -0.29
SGIP1-213ENST00000493564 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
SGIP1-213ENST00000493564 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
SGIP1-213ENST00000493564 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
SGIP1-213ENST00000493564 SLIT2O94813 1529 aa13.24□□□□□ -0.29
SGIP1-213ENST00000493564 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
SGIP1-213ENST00000493564 SOX12O15370 315 aa13.24□□□□□ -0.29
SGIP1-213ENST00000493564 GCP02774 474 aa13.24□□□□□ -0.29
SGIP1-213ENST00000493564 TMF1P82094 1093 aa13.24□□□□□ -0.29
SGIP1-213ENST00000493564 VPS72Q15906 364 aa13.23□□□□□ -0.29
SGIP1-213ENST00000493564 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
SGIP1-213ENST00000493564 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
SGIP1-213ENST00000493564 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
SGIP1-213ENST00000493564 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
SGIP1-213ENST00000493564 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
SGIP1-213ENST00000493564 RGS12O14924 1447 aa13.22□□□□□ -0.29
SGIP1-213ENST00000493564 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
SGIP1-213ENST00000493564 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
SGIP1-213ENST00000493564 EVA1CP58658 441 aa13.21□□□□□ -0.29
SGIP1-213ENST00000493564 NME9Q86XW9 330 aa13.21□□□□□ -0.29
SGIP1-213ENST00000493564 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
SGIP1-213ENST00000493564 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
SGIP1-213ENST00000493564 BRD4O60885 1362 aaPredicted RBP13.2□□□□□ -0.3
SGIP1-213ENST00000493564 USP19O94966 1318 aa13.2□□□□□ -0.3
SGIP1-213ENST00000493564 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
SGIP1-213ENST00000493564 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 A0A0G2JS52 829 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
SGIP1-213ENST00000493564 MYT1Q01538 1121 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
SGIP1-213ENST00000493564 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
SGIP1-213ENST00000493564 USP35Q9P2H5 1018 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 A0A1W2PP64 1363 aa13.19□□□□□ -0.3
SGIP1-213ENST00000493564 PLCH1Q4KWH8 1693 aa13.18□□□□□ -0.3
SGIP1-213ENST00000493564 CDK12Q9NYV4 1490 aaPredicted RBP13.18□□□□□ -0.3
SGIP1-213ENST00000493564 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
SGIP1-213ENST00000493564 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
SGIP1-213ENST00000493564 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
SGIP1-213ENST00000493564 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
SGIP1-213ENST00000493564 GLI3P10071 1580 aa13.16□□□□□ -0.3
SGIP1-213ENST00000493564 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
SGIP1-213ENST00000493564 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
SGIP1-213ENST00000493564 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
SGIP1-213ENST00000493564 SPATA31A5Q5VU36 1347 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 SPATA31A7Q8IWB4 1347 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 PIK3C2AO00443 1686 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
SGIP1-213ENST00000493564 KCNH5Q8NCM2 988 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
SGIP1-213ENST00000493564 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 CPDO75976 1380 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
SGIP1-213ENST00000493564 FBLN1P23142 703 aa13.14□□□□□ -0.31
SGIP1-213ENST00000493564 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
SGIP1-213ENST00000493564 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
SGIP1-213ENST00000493564 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
SGIP1-213ENST00000493564 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
SGIP1-213ENST00000493564 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
SGIP1-213ENST00000493564 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
SGIP1-213ENST00000493564 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 MON2Q7Z3U7 1717 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 SLIT3O75094 1523 aa13.12□□□□□ -0.31
SGIP1-213ENST00000493564 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
SGIP1-213ENST00000493564 ANKRD36BQ8N2N9 1353 aa13.11□□□□□ -0.31
SGIP1-213ENST00000493564 FYB1O15117 783 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms