RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 ARHGEF10O15013 1369 aa23.46■■□□□ 1.35
RER1-208ENST00000493207 MED1Q15648 1581 aaPredicted RBP23.46■■□□□ 1.35
RER1-208ENST00000493207 KTN1Q86UP2 1357 aaKnown RBP23.46■■□□□ 1.35
RER1-208ENST00000493207 ZNF692Q9BU19 519 aaPredicted RBP23.46■■□□□ 1.35
RER1-208ENST00000493207 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
RER1-208ENST00000493207 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
RER1-208ENST00000493207 C11orf95C9JLR9 678 aaPredicted RBP23.45■■□□□ 1.34
RER1-208ENST00000493207 HDGFL2Q7Z4V5 671 aaPredicted RBP23.45■■□□□ 1.34
RER1-208ENST00000493207 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
RER1-208ENST00000493207 A0A1W2PP64 1363 aa23.44■■□□□ 1.34
RER1-208ENST00000493207 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
RER1-208ENST00000493207 LRP6O75581 1613 aa23.44■■□□□ 1.34
RER1-208ENST00000493207 ABCA3Q99758 1704 aa23.43■■□□□ 1.34
RER1-208ENST00000493207 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
RER1-208ENST00000493207 BRD4O60885 1362 aaPredicted RBP23.42■■□□□ 1.34
RER1-208ENST00000493207 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
RER1-208ENST00000493207 ANKRD36BQ8N2N9 1353 aa23.4■■□□□ 1.34
RER1-208ENST00000493207 CRYBG1Q9Y4K1 1723 aa23.4■■□□□ 1.34
RER1-208ENST00000493207 NUTM2GQ5VZR2 741 aa23.4■■□□□ 1.34
RER1-208ENST00000493207 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
RER1-208ENST00000493207 ABTB2Q8N961 1025 aa23.39■■□□□ 1.33
RER1-208ENST00000493207 KIF7Q2M1P5 1343 aa23.38■■□□□ 1.33
RER1-208ENST00000493207 TTC21BQ7Z4L5 1316 aa23.38■■□□□ 1.33
RER1-208ENST00000493207 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
RER1-208ENST00000493207 MARF1Q9Y4F3 1742 aaKnown RBP23.37■■□□□ 1.33
RER1-208ENST00000493207 EDC4Q6P2E9 1401 aaKnown RBP23.37■■□□□ 1.33
RER1-208ENST00000493207 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
RER1-208ENST00000493207 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
RER1-208ENST00000493207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.36■■□□□ 1.33
RER1-208ENST00000493207 TTC21AQ8NDW8 1320 aa23.35■■□□□ 1.33
RER1-208ENST00000493207 HAP1P54257 671 aaPredicted RBP23.35■■□□□ 1.33
RER1-208ENST00000493207 ADAMTS2O95450 1211 aa23.34■■□□□ 1.33
RER1-208ENST00000493207 CCDC7Q96M83 1385 aa23.32■■□□□ 1.32
RER1-208ENST00000493207 NLRP6P59044 892 aa23.31■■□□□ 1.32
RER1-208ENST00000493207 NLRP13Q86W25 1043 aa23.31■■□□□ 1.32
RER1-208ENST00000493207 WASHC2AQ641Q2 1341 aa23.31■■□□□ 1.32
RER1-208ENST00000493207 NME9Q86XW9 330 aa23.3■■□□□ 1.32
RER1-208ENST00000493207 KIF20BQ96Q89 1820 aa23.3■■□□□ 1.32
RER1-208ENST00000493207 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
RER1-208ENST00000493207 C8orf37Q96NL8 207 aa23.29■■□□□ 1.32
RER1-208ENST00000493207 NSD3Q9BZ95 1437 aa23.29■■□□□ 1.32
RER1-208ENST00000493207 USP19O94966 1318 aa23.29■■□□□ 1.32
RER1-208ENST00000493207 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
RER1-208ENST00000493207 CARD14Q9BXL6 1004 aa23.28■■□□□ 1.32
RER1-208ENST00000493207 ZRANB1Q9UGI0 708 aa23.28■■□□□ 1.32
RER1-208ENST00000493207 PANK3Q9H999 370 aa23.27■■□□□ 1.32
RER1-208ENST00000493207 SLIT3O75094 1523 aa23.27■■□□□ 1.32
RER1-208ENST00000493207 USP31Q70CQ4 1352 aa23.25■■□□□ 1.31
RER1-208ENST00000493207 NGLY1Q96IV0 654 aa23.24■■□□□ 1.31
RER1-208ENST00000493207 PLCH1Q4KWH8 1693 aa23.24■■□□□ 1.31
RER1-208ENST00000493207 GCP02774 474 aa23.23■■□□□ 1.31
RER1-208ENST00000493207 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
RER1-208ENST00000493207 AFF2P51816 1311 aa23.22■■□□□ 1.31
RER1-208ENST00000493207 OVOS2A0A0J9YW53 1432 aa23.22■■□□□ 1.31
RER1-208ENST00000493207 OVOS2Q6IE36 1432 aa23.22■■□□□ 1.31
RER1-208ENST00000493207 COL14A1Q05707 1796 aaKnown RBP23.22■■□□□ 1.31
RER1-208ENST00000493207 FYB1O15117 783 aa23.21■■□□□ 1.31
RER1-208ENST00000493207 SOX12O15370 315 aa23.21■■□□□ 1.31
RER1-208ENST00000493207 KIAA0232Q92628 1395 aa23.21■■□□□ 1.31
RER1-208ENST00000493207 FAM83GA6ND36 823 aa23.2■■□□□ 1.3
RER1-208ENST00000493207 GGNBP2Q9H3C7 697 aa23.2■■□□□ 1.3
RER1-208ENST00000493207 NFAT5O94916 1531 aa23.19■■□□□ 1.3
RER1-208ENST00000493207 KCNH5Q8NCM2 988 aa23.19■■□□□ 1.3
RER1-208ENST00000493207 COG3Q96JB2 828 aa23.19■■□□□ 1.3
RER1-208ENST00000493207 RGS17Q9UGC6 210 aaPredicted RBP23.19■■□□□ 1.3
RER1-208ENST00000493207 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
RER1-208ENST00000493207 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
RER1-208ENST00000493207 NWD2Q9ULI1 1742 aa23.18■■□□□ 1.3
RER1-208ENST00000493207 ANKRD26Q9UPS8 1709 aa23.17■■□□□ 1.3
RER1-208ENST00000493207 CHRNA2Q15822 529 aa23.17■■□□□ 1.3
RER1-208ENST00000493207 SLIT2O94813 1529 aa23.17■■□□□ 1.3
RER1-208ENST00000493207 LTN1O94822 1766 aa23.17■■□□□ 1.3
RER1-208ENST00000493207 CPDO75976 1380 aa23.16■■□□□ 1.3
RER1-208ENST00000493207 ZBTB7CA1YPR0 619 aa23.16■■□□□ 1.3
RER1-208ENST00000493207 FNBP4Q8N3X1 1017 aaPredicted RBP23.16■■□□□ 1.3
RER1-208ENST00000493207 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
RER1-208ENST00000493207 USP21Q9UK80 565 aa23.15■■□□□ 1.3
RER1-208ENST00000493207 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
RER1-208ENST00000493207 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.15■■□□□ 1.3
RER1-208ENST00000493207 NRAPQ86VF7 1730 aa23.14■■□□□ 1.3
RER1-208ENST00000493207 BCL9LQ86UU0 1499 aa23.14■■□□□ 1.29
RER1-208ENST00000493207 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
RER1-208ENST00000493207 BTG4Q9NY30 223 aa23.12■■□□□ 1.29
RER1-208ENST00000493207 COL18A1P39060 1754 aa23.12■■□□□ 1.29
RER1-208ENST00000493207 ARHGEF25Q86VW2 580 aa23.11■■□□□ 1.29
RER1-208ENST00000493207 RGPD5Q99666 1765 aa23.11■■□□□ 1.29
RER1-208ENST00000493207 POTEAQ6S8J7 498 aa23.1■■□□□ 1.29
RER1-208ENST00000493207 UNC5CLQ8IV45 518 aa23.1■■□□□ 1.29
RER1-208ENST00000493207 PER1O15534 1290 aaPredicted RBP23.09■■□□□ 1.29
RER1-208ENST00000493207 NSD2O96028 1365 aa23.09■■□□□ 1.29
RER1-208ENST00000493207 CAMTA1Q9Y6Y1 1673 aa23.09■■□□□ 1.29
RER1-208ENST00000493207 FBLN1P23142 703 aa23.08■■□□□ 1.29
RER1-208ENST00000493207 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.29
RER1-208ENST00000493207 AATKQ6ZMQ8 1374 aa23.08■■□□□ 1.29
RER1-208ENST00000493207 ATRNO75882 1429 aa23.07■■□□□ 1.28
RER1-208ENST00000493207 AMER1Q5JTC6 1135 aaPredicted RBP23.06■■□□□ 1.28
RER1-208ENST00000493207 TRPC5Q9UL62 973 aaPredicted RBP23.06■■□□□ 1.28
RER1-208ENST00000493207 ABCC6O95255 1503 aa23.06■■□□□ 1.28
RER1-208ENST00000493207 MAP2P11137 1827 aaKnown RBP23.04■■□□□ 1.28
RER1-208ENST00000493207 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms