RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PHRF1Q9P1Y6 1649 aaKnown RBP17.92■□□□□ 0.46
CLIP2-209ENST00000493166 USP6P35125 1406 aa17.91■□□□□ 0.46
CLIP2-209ENST00000493166 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLIP2-209ENST00000493166 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
CLIP2-209ENST00000493166 PLEKHG5O94827 1062 aa17.9■□□□□ 0.46
CLIP2-209ENST00000493166 ADAMTS2O95450 1211 aa17.9■□□□□ 0.46
CLIP2-209ENST00000493166 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
CLIP2-209ENST00000493166 HAP1P54257 671 aaPredicted RBP17.89■□□□□ 0.45
CLIP2-209ENST00000493166 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
CLIP2-209ENST00000493166 MYOM1P52179 1685 aa17.89■□□□□ 0.45
CLIP2-209ENST00000493166 BRD4O60885 1362 aaPredicted RBP17.89■□□□□ 0.45
CLIP2-209ENST00000493166 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
CLIP2-209ENST00000493166 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
CLIP2-209ENST00000493166 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
CLIP2-209ENST00000493166 NINLQ9Y2I6 1382 aa17.88■□□□□ 0.45
CLIP2-209ENST00000493166 CPSF1Q10570 1443 aaKnown RBP17.88■□□□□ 0.45
CLIP2-209ENST00000493166 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
CLIP2-209ENST00000493166 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-209ENST00000493166 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
CLIP2-209ENST00000493166 CD163L1Q9NR16 1453 aa17.87■□□□□ 0.45
CLIP2-209ENST00000493166 PLCH1Q4KWH8 1693 aa17.87■□□□□ 0.45
CLIP2-209ENST00000493166 SLC12A5Q9H2X9 1139 aa17.86■□□□□ 0.45
CLIP2-209ENST00000493166 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-209ENST00000493166 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
CLIP2-209ENST00000493166 RGS17Q9UGC6 210 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-209ENST00000493166 SSH2Q76I76 1423 aa17.84■□□□□ 0.45
CLIP2-209ENST00000493166 AFF2P51816 1311 aa17.84■□□□□ 0.45
CLIP2-209ENST00000493166 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
CLIP2-209ENST00000493166 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
CLIP2-209ENST00000493166 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
CLIP2-209ENST00000493166 A0A1W2PP64 1363 aa17.83■□□□□ 0.45
CLIP2-209ENST00000493166 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
CLIP2-209ENST00000493166 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.44
CLIP2-209ENST00000493166 COL14A1Q05707 1796 aaKnown RBP17.82■□□□□ 0.44
CLIP2-209ENST00000493166 USP54Q70EL1 1684 aa17.82■□□□□ 0.44
CLIP2-209ENST00000493166 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
CLIP2-209ENST00000493166 TTC21AQ8NDW8 1320 aa17.81■□□□□ 0.44
CLIP2-209ENST00000493166 ZNF772Q68DY9 489 aaPredicted RBP17.81■□□□□ 0.44
CLIP2-209ENST00000493166 EDC4Q6P2E9 1401 aaKnown RBP17.81■□□□□ 0.44
CLIP2-209ENST00000493166 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
CLIP2-209ENST00000493166 ANKRD36BQ8N2N9 1353 aa17.79■□□□□ 0.44
CLIP2-209ENST00000493166 NLRP13Q86W25 1043 aa17.79■□□□□ 0.44
CLIP2-209ENST00000493166 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
CLIP2-209ENST00000493166 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
CLIP2-209ENST00000493166 SLIT3O75094 1523 aa17.78■□□□□ 0.44
CLIP2-209ENST00000493166 USP19O94966 1318 aa17.78■□□□□ 0.44
CLIP2-209ENST00000493166 NLRP6P59044 892 aa17.78■□□□□ 0.44
CLIP2-209ENST00000493166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLIP2-209ENST00000493166 POTEAQ6S8J7 498 aa17.77■□□□□ 0.44
CLIP2-209ENST00000493166 FNBP4Q8N3X1 1017 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-209ENST00000493166 USP21Q9UK80 565 aa17.77■□□□□ 0.44
CLIP2-209ENST00000493166 SLIT2O94813 1529 aa17.77■□□□□ 0.43
CLIP2-209ENST00000493166 LTN1O94822 1766 aa17.75■□□□□ 0.43
CLIP2-209ENST00000493166 KIAA0232Q92628 1395 aa17.75■□□□□ 0.43
CLIP2-209ENST00000493166 BCL9LQ86UU0 1499 aa17.75■□□□□ 0.43
CLIP2-209ENST00000493166 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
CLIP2-209ENST00000493166 GCP02774 474 aa17.73■□□□□ 0.43
CLIP2-209ENST00000493166 ZC3H6P61129 1189 aaKnown RBP17.73■□□□□ 0.43
CLIP2-209ENST00000493166 NME9Q86XW9 330 aa17.73■□□□□ 0.43
CLIP2-209ENST00000493166 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
CLIP2-209ENST00000493166 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
CLIP2-209ENST00000493166 LMO7Q8WWI1 1683 aa17.72■□□□□ 0.43
CLIP2-209ENST00000493166 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
CLIP2-209ENST00000493166 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
CLIP2-209ENST00000493166 ATRNO75882 1429 aa17.72■□□□□ 0.43
CLIP2-209ENST00000493166 CPDO75976 1380 aa17.71■□□□□ 0.43
CLIP2-209ENST00000493166 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
CLIP2-209ENST00000493166 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
CLIP2-209ENST00000493166 NFAT5O94916 1531 aa17.71■□□□□ 0.43
CLIP2-209ENST00000493166 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
CLIP2-209ENST00000493166 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
CLIP2-209ENST00000493166 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
CLIP2-209ENST00000493166 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
CLIP2-209ENST00000493166 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 COL18A1P39060 1754 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 SOX12O15370 315 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 RXRBP28702 533 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 NSD3Q9BZ95 1437 aa17.69■□□□□ 0.42
CLIP2-209ENST00000493166 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
CLIP2-209ENST00000493166 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
CLIP2-209ENST00000493166 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
CLIP2-209ENST00000493166 GLI3P10071 1580 aa17.66■□□□□ 0.42
CLIP2-209ENST00000493166 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-209ENST00000493166 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
CLIP2-209ENST00000493166 COG3Q96JB2 828 aa17.65■□□□□ 0.42
CLIP2-209ENST00000493166 CARD14Q9BXL6 1004 aa17.65■□□□□ 0.42
CLIP2-209ENST00000493166 ABCC6O95255 1503 aa17.64■□□□□ 0.41
CLIP2-209ENST00000493166 VPS72Q15906 364 aa17.64■□□□□ 0.41
CLIP2-209ENST00000493166 GJD4Q96KN9 370 aaPredicted RBP17.64■□□□□ 0.41
CLIP2-209ENST00000493166 CCDC9Q9Y3X0 531 aaKnown RBP17.64■□□□□ 0.41
CLIP2-209ENST00000493166 FYB1O15117 783 aa17.63■□□□□ 0.41
CLIP2-209ENST00000493166 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-209ENST00000493166 PANK3Q9H999 370 aa17.63■□□□□ 0.41
CLIP2-209ENST00000493166 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
CLIP2-209ENST00000493166 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
CLIP2-209ENST00000493166 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
CLIP2-209ENST00000493166 RGS12O14924 1447 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms