RNA–Protein interactions for RNA: ENST00000493056.5

LTF-208, Transcript of lactotransferrin, human

TSL 3

Gene LTF, Length 493 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTF-208	ENST00000493056	USP21	Q9UK80	565 aa		11.29	□□□□□ -0.6
LTF-208	ENST00000493056	TRPC5	Q9UL62	973 aa	Predicted RBP	11.29	□□□□□ -0.6
LTF-208	ENST00000493056	PRR36	Q9H6K5	1346 aa		11.29	□□□□□ -0.6
LTF-208	ENST00000493056	ABCA3	Q99758	1704 aa		11.29	□□□□□ -0.6
LTF-208	ENST00000493056	SBNO2	Q9Y2G9	1366 aa		11.28	□□□□□ -0.6
LTF-208	ENST00000493056	AKAP12	Q02952	1782 aa		11.28	□□□□□ -0.6
LTF-208	ENST00000493056	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.28	□□□□□ -0.6
LTF-208	ENST00000493056	ACE	P12821	1306 aa		11.28	□□□□□ -0.6
LTF-208	ENST00000493056	ATAD2	Q6PL18	1390 aa		11.27	□□□□□ -0.61
LTF-208	ENST00000493056	PPIP5K1	Q6PFW1	1433 aa		11.26	□□□□□ -0.61
LTF-208	ENST00000493056	COL14A1	Q05707	1796 aa	Known RBP	11.26	□□□□□ -0.61
LTF-208	ENST00000493056	CCER1	Q8TC90	406 aa	Predicted RBP	11.26	□□□□□ -0.61
LTF-208	ENST00000493056	PLCH1	Q4KWH8	1693 aa		11.25	□□□□□ -0.61
LTF-208	ENST00000493056	NLRP13	Q86W25	1043 aa		11.25	□□□□□ -0.61
LTF-208	ENST00000493056	ABTB2	Q8N961	1025 aa		11.25	□□□□□ -0.61
LTF-208	ENST00000493056	CABP2	Q9NPB3	220 aa		11.25	□□□□□ -0.61
LTF-208	ENST00000493056	CRYBG1	Q9Y4K1	1723 aa		11.24	□□□□□ -0.61
LTF-208	ENST00000493056	UNC5CL	Q8IV45	518 aa		11.24	□□□□□ -0.61
LTF-208	ENST00000493056	CABP1	Q9NZU7	370 aa		11.24	□□□□□ -0.61
LTF-208	ENST00000493056	CDCA8	Q53HL2	280 aa		11.23	□□□□□ -0.61
LTF-208	ENST00000493056	SLIT2	O94813	1529 aa		11.22	□□□□□ -0.61
LTF-208	ENST00000493056	BCL9L	Q86UU0	1499 aa		11.22	□□□□□ -0.61
LTF-208	ENST00000493056	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.22	□□□□□ -0.61
LTF-208	ENST00000493056	MON2	Q7Z3U7	1717 aa		11.21	□□□□□ -0.61
LTF-208	ENST00000493056	NINL	Q9Y2I6	1382 aa		11.21	□□□□□ -0.61
LTF-208	ENST00000493056	TTC21A	Q8NDW8	1320 aa		11.21	□□□□□ -0.61
LTF-208	ENST00000493056	CABLES1	Q8TDN4	633 aa		11.21	□□□□□ -0.61
LTF-208	ENST00000493056	GJD4	Q96KN9	370 aa	Predicted RBP	11.21	□□□□□ -0.61
LTF-208	ENST00000493056	TERF2IP	Q9NYB0	399 aa		11.21	□□□□□ -0.61
LTF-208	ENST00000493056	ATRN	O75882	1429 aa		11.2	□□□□□ -0.62
LTF-208	ENST00000493056	FAM83G	A6ND36	823 aa		11.2	□□□□□ -0.62
LTF-208	ENST00000493056	TMF1	P82094	1093 aa		11.2	□□□□□ -0.62
LTF-208	ENST00000493056	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.2	□□□□□ -0.62
LTF-208	ENST00000493056	USP6	P35125	1406 aa		11.19	□□□□□ -0.62
LTF-208	ENST00000493056	ST20-MTHFS	A0A0A6YYL1	179 aa		11.19	□□□□□ -0.62
LTF-208	ENST00000493056	VPS72	Q15906	364 aa		11.19	□□□□□ -0.62
LTF-208	ENST00000493056	KCNH5	Q8NCM2	988 aa		11.19	□□□□□ -0.62
LTF-208	ENST00000493056	PRDM11	Q9NQV5	511 aa		11.19	□□□□□ -0.62
LTF-208	ENST00000493056	BRWD3	Q6RI45	1802 aa		11.19	□□□□□ -0.62
LTF-208	ENST00000493056	KTN1	Q86UP2	1357 aa	Known RBP	11.18	□□□□□ -0.62
LTF-208	ENST00000493056	NLRP6	P59044	892 aa		11.18	□□□□□ -0.62
LTF-208	ENST00000493056	NRAP	Q86VF7	1730 aa		11.18	□□□□□ -0.62
LTF-208	ENST00000493056	CPSF1	Q10570	1443 aa	Known RBP	11.18	□□□□□ -0.62
LTF-208	ENST00000493056	PLEKHG5	O94827	1062 aa		11.17	□□□□□ -0.62
LTF-208	ENST00000493056	GC	P02774	474 aa		11.17	□□□□□ -0.62
LTF-208	ENST00000493056	EVA1C	P58658	441 aa		11.17	□□□□□ -0.62
LTF-208	ENST00000493056	CCDC125	Q86Z20	511 aa		11.17	□□□□□ -0.62
LTF-208	ENST00000493056	TMC1	Q8TDI8	760 aa		11.17	□□□□□ -0.62
LTF-208	ENST00000493056	BTG4	Q9NY30	223 aa		11.17	□□□□□ -0.62
LTF-208	ENST00000493056	CCDC9	Q9Y3X0	531 aa	Known RBP	11.17	□□□□□ -0.62
LTF-208	ENST00000493056	ONECUT3	O60422	494 aa	Predicted RBP	11.16	□□□□□ -0.62
LTF-208	ENST00000493056	TESK2	Q96S53	571 aa		11.16	□□□□□ -0.62
LTF-208	ENST00000493056	PIK3C2A	O00443	1686 aa		11.16	□□□□□ -0.62
LTF-208	ENST00000493056	RGPD5	Q99666	1765 aa		11.16	□□□□□ -0.62
LTF-208	ENST00000493056	CPD	O75976	1380 aa		11.16	□□□□□ -0.62
LTF-208	ENST00000493056	USP47	Q96K76	1375 aa		11.16	□□□□□ -0.62
LTF-208	ENST00000493056	USP19	O94966	1318 aa		11.15	□□□□□ -0.62
LTF-208	ENST00000493056	TTC21B	Q7Z4L5	1316 aa		11.15	□□□□□ -0.62
LTF-208	ENST00000493056	USP54	Q70EL1	1684 aa		11.15	□□□□□ -0.62
LTF-208	ENST00000493056	SSH2	Q76I76	1423 aa		11.15	□□□□□ -0.62
LTF-208	ENST00000493056	NRK	Q7Z2Y5	1582 aa		11.15	□□□□□ -0.62
LTF-208	ENST00000493056	LTN1	O94822	1766 aa		11.14	□□□□□ -0.63
LTF-208	ENST00000493056	ZC3H6	P61129	1189 aa	Known RBP	11.14	□□□□□ -0.63
LTF-208	ENST00000493056	NUTM2G	Q5VZR2	741 aa		11.14	□□□□□ -0.63
LTF-208	ENST00000493056	KIAA0232	Q92628	1395 aa		11.14	□□□□□ -0.63
LTF-208	ENST00000493056	RGS12	O14924	1447 aa		11.13	□□□□□ -0.63
LTF-208	ENST00000493056	EDC4	Q6P2E9	1401 aa	Known RBP	11.13	□□□□□ -0.63
LTF-208	ENST00000493056	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
LTF-208	ENST00000493056	SLC12A5	Q9H2X9	1139 aa		11.13	□□□□□ -0.63
LTF-208	ENST00000493056	SLIT3	O75094	1523 aa		11.13	□□□□□ -0.63
LTF-208	ENST00000493056	GLI3	P10071	1580 aa		11.12	□□□□□ -0.63
LTF-208	ENST00000493056	THRAP3	Q9Y2W1	955 aa	Known RBP	11.12	□□□□□ -0.63
LTF-208	ENST00000493056	SPATA31A5	Q5VU36	1347 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	SPATA31A7	Q8IWB4	1347 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	LMO7	Q8WWI1	1683 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	COL18A1	P39060	1754 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	C11orf95	C9JLR9	678 aa	Predicted RBP	11.11	□□□□□ -0.63
LTF-208	ENST00000493056	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
LTF-208	ENST00000493056	KAT6B	Q8WYB5	2073 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	AATK	Q6ZMQ8	1374 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	USP31	Q70CQ4	1352 aa		11.11	□□□□□ -0.63
LTF-208	ENST00000493056	ABCC6	O95255	1503 aa		11.1	□□□□□ -0.63
LTF-208	ENST00000493056	KIF20B	Q96Q89	1820 aa		11.1	□□□□□ -0.63
LTF-208	ENST00000493056	SEPT12	Q8IYM1	358 aa		11.1	□□□□□ -0.63
LTF-208	ENST00000493056	CD163L1	Q9NR16	1453 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	ANKRD36B	Q8N2N9	1353 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	CHRNA2	Q15822	529 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	BARGIN	Q6ZT62	677 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	KRT27	Q7Z3Y8	459 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
LTF-208	ENST00000493056	STRN4	Q9NRL3	753 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	SPATA31A1	Q5TZJ5	1347 aa		11.09	□□□□□ -0.63
LTF-208	ENST00000493056	CAMTA1	Q9Y6Y1	1673 aa		11.08	□□□□□ -0.64
LTF-208	ENST00000493056		A0A1W2PP64	1363 aa		11.08	□□□□□ -0.64
LTF-208	ENST00000493056	MAP2	P11137	1827 aa	Known RBP	11.08	□□□□□ -0.64
LTF-208	ENST00000493056		A0A0G2JS52	829 aa		11.08	□□□□□ -0.64
LTF-208	ENST00000493056	MYT1	Q01538	1121 aa		11.08	□□□□□ -0.64
LTF-208	ENST00000493056	SF3B2	Q13435	895 aa	Known RBP	11.08	□□□□□ -0.64
LTF-208	ENST00000493056	ARHGEF25	Q86VW2	580 aa		11.08	□□□□□ -0.64
LTF-208	ENST00000493056	COG3	Q96JB2	828 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms