RNA–Protein interactions for RNA: ENST00000492413.5

SLC11A1-216, Transcript of solute carrier family 11 member 1, humanhuman

TSL 2

Gene SLC11A1, Length 975 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-216ENST00000492413 RGS12O14924 1447 aa22.28■■□□□ 1.16
SLC11A1-216ENST00000492413 FNBP4Q8N3X1 1017 aaPredicted RBP22.27■■□□□ 1.16
SLC11A1-216ENST00000492413 ST20-MTHFSA0A0A6YYL1 179 aa22.26■■□□□ 1.15
SLC11A1-216ENST00000492413 TRPC5Q9UL62 973 aaPredicted RBP22.26■■□□□ 1.15
SLC11A1-216ENST00000492413 ITSN1Q15811 1721 aa22.24■■□□□ 1.15
SLC11A1-216ENST00000492413 UPF1Q92900 1129 aaKnown RBP eCLIP22.24■■□□□ 1.15
SLC11A1-216ENST00000492413 ATAD2Q6PL18 1390 aa22.23■■□□□ 1.15
SLC11A1-216ENST00000492413 ATRNO75882 1429 aa22.23■■□□□ 1.15
SLC11A1-216ENST00000492413 NUTM2GQ5VZR2 741 aa22.22■■□□□ 1.15
SLC11A1-216ENST00000492413 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
SLC11A1-216ENST00000492413 ABCA3Q99758 1704 aa22.22■■□□□ 1.15
SLC11A1-216ENST00000492413 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.22■■□□□ 1.15
SLC11A1-216ENST00000492413 ABTB2Q8N961 1025 aa22.21■■□□□ 1.15
SLC11A1-216ENST00000492413 TESK2Q96S53 571 aa22.21■■□□□ 1.15
SLC11A1-216ENST00000492413 TRPM3Q9HCF6 1732 aaPredicted RBP22.2■■□□□ 1.14
SLC11A1-216ENST00000492413 SLC24A1O60721 1099 aa22.2■■□□□ 1.14
SLC11A1-216ENST00000492413 USP47Q96K76 1375 aa22.2■■□□□ 1.14
SLC11A1-216ENST00000492413 BCL9LQ86UU0 1499 aa22.2■■□□□ 1.14
SLC11A1-216ENST00000492413 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
SLC11A1-216ENST00000492413 EP400Q96L91 3159 aa22.19■■□□□ 1.14
SLC11A1-216ENST00000492413 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
SLC11A1-216ENST00000492413 USP6P35125 1406 aa22.17■■□□□ 1.14
SLC11A1-216ENST00000492413 FAM83GA6ND36 823 aa22.17■■□□□ 1.14
SLC11A1-216ENST00000492413 TMC1Q8TDI8 760 aa22.17■■□□□ 1.14
SLC11A1-216ENST00000492413 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
SLC11A1-216ENST00000492413 PUS7Q96PZ0 661 aaKnown RBP22.16■■□□□ 1.14
SLC11A1-216ENST00000492413 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
SLC11A1-216ENST00000492413 ALS2Q96Q42 1657 aa22.16■■□□□ 1.14
SLC11A1-216ENST00000492413 SLIT2O94813 1529 aa22.15■■□□□ 1.14
SLC11A1-216ENST00000492413 NLRP13Q86W25 1043 aa22.14■■□□□ 1.13
SLC11A1-216ENST00000492413 SLC12A5Q9H2X9 1139 aa22.14■■□□□ 1.13
SLC11A1-216ENST00000492413 NWD2Q9ULI1 1742 aa22.14■■□□□ 1.13
SLC11A1-216ENST00000492413 NLRP6P59044 892 aa22.12■■□□□ 1.13
SLC11A1-216ENST00000492413 TMF1P82094 1093 aa22.12■■□□□ 1.13
SLC11A1-216ENST00000492413 GJD4Q96KN9 370 aaPredicted RBP22.12■■□□□ 1.13
SLC11A1-216ENST00000492413 PRDM11Q9NQV5 511 aa22.12■■□□□ 1.13
SLC11A1-216ENST00000492413 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
SLC11A1-216ENST00000492413 TTC21BQ7Z4L5 1316 aa22.11■■□□□ 1.13
SLC11A1-216ENST00000492413 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
SLC11A1-216ENST00000492413 CPSF1Q10570 1443 aaKnown RBP22.11■■□□□ 1.13
SLC11A1-216ENST00000492413 SSH2Q76I76 1423 aa22.11■■□□□ 1.13
SLC11A1-216ENST00000492413 HDGFL2Q7Z4V5 671 aaPredicted RBP22.1■■□□□ 1.13
SLC11A1-216ENST00000492413 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
SLC11A1-216ENST00000492413 USP19O94966 1318 aa22.09■■□□□ 1.13
SLC11A1-216ENST00000492413 GLI3P10071 1580 aa22.09■■□□□ 1.13
SLC11A1-216ENST00000492413 GCP02774 474 aa22.09■■□□□ 1.13
SLC11A1-216ENST00000492413 TERF2IPQ9NYB0 399 aa22.09■■□□□ 1.13
SLC11A1-216ENST00000492413 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
SLC11A1-216ENST00000492413 TTC21AQ8NDW8 1320 aa22.07■■□□□ 1.12
SLC11A1-216ENST00000492413 CHRNA2Q15822 529 aa22.07■■□□□ 1.12
SLC11A1-216ENST00000492413 VPS72Q15906 364 aa22.07■■□□□ 1.12
SLC11A1-216ENST00000492413 CCDC9Q9Y3X0 531 aaKnown RBP22.07■■□□□ 1.12
SLC11A1-216ENST00000492413 CRYBG1Q9Y4K1 1723 aa22.06■■□□□ 1.12
SLC11A1-216ENST00000492413 CDCA8Q53HL2 280 aa22.06■■□□□ 1.12
SLC11A1-216ENST00000492413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.06■■□□□ 1.12
SLC11A1-216ENST00000492413 BRWD3Q6RI45 1802 aa22.05■■□□□ 1.12
SLC11A1-216ENST00000492413 COL14A1Q05707 1796 aaKnown RBP22.04■■□□□ 1.12
SLC11A1-216ENST00000492413 CD163L1Q9NR16 1453 aa22.04■■□□□ 1.12
SLC11A1-216ENST00000492413 NINLQ9Y2I6 1382 aa22.04■■□□□ 1.12
SLC11A1-216ENST00000492413 EIF4G2P78344 907 aaKnown RBP eCLIP22.04■■□□□ 1.12
SLC11A1-216ENST00000492413 NRAPQ86VF7 1730 aa22.03■■□□□ 1.12
SLC11A1-216ENST00000492413 A0A1W2PP64 1363 aa22.02■■□□□ 1.12
SLC11A1-216ENST00000492413 CPDO75976 1380 aa22.01■■□□□ 1.11
SLC11A1-216ENST00000492413 PHRF1Q9P1Y6 1649 aaKnown RBP22■■□□□ 1.11
SLC11A1-216ENST00000492413 ZBTB7CA1YPR0 619 aa22■■□□□ 1.11
SLC11A1-216ENST00000492413 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
SLC11A1-216ENST00000492413 NME9Q86XW9 330 aa22■■□□□ 1.11
SLC11A1-216ENST00000492413 EDC4Q6P2E9 1401 aaKnown RBP21.99■■□□□ 1.11
SLC11A1-216ENST00000492413 SOX12O15370 315 aa21.99■■□□□ 1.11
SLC11A1-216ENST00000492413 KCNH5Q8NCM2 988 aa21.99■■□□□ 1.11
SLC11A1-216ENST00000492413 STRN4Q9NRL3 753 aa21.99■■□□□ 1.11
SLC11A1-216ENST00000492413 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
SLC11A1-216ENST00000492413 EVA1CP58658 441 aa21.98■■□□□ 1.11
SLC11A1-216ENST00000492413 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
SLC11A1-216ENST00000492413 PIK3C2AO00443 1686 aa21.96■■□□□ 1.11
SLC11A1-216ENST00000492413 ANKRD36BQ8N2N9 1353 aa21.96■■□□□ 1.11
SLC11A1-216ENST00000492413 SLIT3O75094 1523 aa21.96■■□□□ 1.11
SLC11A1-216ENST00000492413 AKAP12Q02952 1782 aa21.95■■□□□ 1.1
SLC11A1-216ENST00000492413 SEPT12Q8IYM1 358 aa21.95■■□□□ 1.1
SLC11A1-216ENST00000492413 SPATA31A5Q5VU36 1347 aa21.95■■□□□ 1.1
SLC11A1-216ENST00000492413 SPATA31A7Q8IWB4 1347 aa21.95■■□□□ 1.1
SLC11A1-216ENST00000492413 USP31Q70CQ4 1352 aa21.95■■□□□ 1.1
SLC11A1-216ENST00000492413 A0A0G2JS52 829 aa21.94■■□□□ 1.1
SLC11A1-216ENST00000492413 ONECUT3O60422 494 aaPredicted RBP21.94■■□□□ 1.1
SLC11A1-216ENST00000492413 MYT1Q01538 1121 aa21.94■■□□□ 1.1
SLC11A1-216ENST00000492413 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
SLC11A1-216ENST00000492413 AATKQ6ZMQ8 1374 aa21.93■■□□□ 1.1
SLC11A1-216ENST00000492413 ARHGEF25Q86VW2 580 aa21.93■■□□□ 1.1
SLC11A1-216ENST00000492413 CCDC125Q86Z20 511 aa21.93■■□□□ 1.1
SLC11A1-216ENST00000492413 POLR3GLQ9BT43 218 aa21.93■■□□□ 1.1
SLC11A1-216ENST00000492413 MON2Q7Z3U7 1717 aa21.92■■□□□ 1.1
SLC11A1-216ENST00000492413 SPATA31A1Q5TZJ5 1347 aa21.91■■□□□ 1.1
SLC11A1-216ENST00000492413 LARP1Q6PKG0 1096 aaKnown RBP21.91■■□□□ 1.1
SLC11A1-216ENST00000492413 CAMTA1Q9Y6Y1 1673 aa21.91■■□□□ 1.1
SLC11A1-216ENST00000492413 SRCAPQ6ZRS2 3230 aa21.91■■□□□ 1.1
SLC11A1-216ENST00000492413 USP35Q9P2H5 1018 aa21.9■■□□□ 1.1
SLC11A1-216ENST00000492413 AXIN2Q9Y2T1 843 aa21.89■■□□□ 1.09
SLC11A1-216ENST00000492413 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.09
SLC11A1-216ENST00000492413 KRT27Q7Z3Y8 459 aa21.88■■□□□ 1.09
SLC11A1-216ENST00000492413 COG3Q96JB2 828 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms