RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
EPHB4-208ENST00000492403 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
EPHB4-208ENST00000492403 ACIN1Q9UKV3 1341 aaKnown RBP14.74□□□□□ -0.05
EPHB4-208ENST00000492403 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
EPHB4-208ENST00000492403 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
EPHB4-208ENST00000492403 SLAIN2Q9P270 581 aa14.74□□□□□ -0.05
EPHB4-208ENST00000492403 ALKQ9UM73 1620 aa14.74□□□□□ -0.05
EPHB4-208ENST00000492403 FAM117AQ9C073 453 aa14.73□□□□□ -0.05
EPHB4-208ENST00000492403 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
EPHB4-208ENST00000492403 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
EPHB4-208ENST00000492403 NWD1Q149M9 1564 aa14.73□□□□□ -0.05
EPHB4-208ENST00000492403 SPHKAPQ2M3C7 1700 aa14.72□□□□□ -0.05
EPHB4-208ENST00000492403 ROBO1Q9Y6N7 1651 aa14.71□□□□□ -0.05
EPHB4-208ENST00000492403 DPYSL4O14531 572 aa14.71□□□□□ -0.05
EPHB4-208ENST00000492403 C1orf115Q9H7X2 142 aa14.71□□□□□ -0.05
EPHB4-208ENST00000492403 PIK3R4Q99570 1358 aa14.71□□□□□ -0.06
EPHB4-208ENST00000492403 TRPM2O94759 1503 aa14.71□□□□□ -0.06
EPHB4-208ENST00000492403 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
EPHB4-208ENST00000492403 NCOA3Q9Y6Q9 1424 aa14.69□□□□□ -0.06
EPHB4-208ENST00000492403 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
EPHB4-208ENST00000492403 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
EPHB4-208ENST00000492403 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
EPHB4-208ENST00000492403 PHLPP1O60346 1717 aa14.68□□□□□ -0.06
EPHB4-208ENST00000492403 KIF1BO60333 1816 aa14.67□□□□□ -0.06
EPHB4-208ENST00000492403 MEX3CQ5U5Q3 659 aaKnown RBP14.67□□□□□ -0.06
EPHB4-208ENST00000492403 FLIIQ13045 1269 aa14.66□□□□□ -0.06
EPHB4-208ENST00000492403 PDIA6Q15084 440 aa14.66□□□□□ -0.06
EPHB4-208ENST00000492403 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
EPHB4-208ENST00000492403 GPR37O15354 613 aa14.65□□□□□ -0.06
EPHB4-208ENST00000492403 APBB1O00213 710 aa14.64□□□□□ -0.07
EPHB4-208ENST00000492403 NAIPQ13075 1403 aa14.64□□□□□ -0.07
EPHB4-208ENST00000492403 ADAMTS13Q76LX8 1427 aa14.64□□□□□ -0.07
EPHB4-208ENST00000492403 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
EPHB4-208ENST00000492403 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
EPHB4-208ENST00000492403 JCADQ9P266 1359 aa14.63□□□□□ -0.07
EPHB4-208ENST00000492403 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
EPHB4-208ENST00000492403 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
EPHB4-208ENST00000492403 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
EPHB4-208ENST00000492403 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.62□□□□□ -0.07
EPHB4-208ENST00000492403 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
EPHB4-208ENST00000492403 CLTCL1P53675 1640 aa14.6□□□□□ -0.07
EPHB4-208ENST00000492403 CCDC102AQ96A19 550 aa14.6□□□□□ -0.07
EPHB4-208ENST00000492403 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
EPHB4-208ENST00000492403 MAP2K5Q13163 448 aa14.59□□□□□ -0.07
EPHB4-208ENST00000492403 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
EPHB4-208ENST00000492403 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
EPHB4-208ENST00000492403 SPATA31A6Q5VVP1 1343 aa14.58□□□□□ -0.08
EPHB4-208ENST00000492403 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.08
EPHB4-208ENST00000492403 DCCP43146 1447 aa14.57□□□□□ -0.08
EPHB4-208ENST00000492403 NUTM2FA1L443 756 aa14.56□□□□□ -0.08
EPHB4-208ENST00000492403 NUTM2BA6NNL0 878 aaPredicted RBP14.56□□□□□ -0.08
EPHB4-208ENST00000492403 NUTM2EB1AL46 878 aaPredicted RBP14.56□□□□□ -0.08
EPHB4-208ENST00000492403 AMHR2Q16671 573 aa14.56□□□□□ -0.08
EPHB4-208ENST00000492403 NUTM2AQ8IVF1 878 aaPredicted RBP14.56□□□□□ -0.08
EPHB4-208ENST00000492403 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
EPHB4-208ENST00000492403 PTPRUQ92729 1446 aa14.56□□□□□ -0.08
EPHB4-208ENST00000492403 NEXMIFQ5QGS0 1516 aa14.56□□□□□ -0.08
EPHB4-208ENST00000492403 PARP9Q8IXQ6 854 aa14.55□□□□□ -0.08
EPHB4-208ENST00000492403 METP08581 1390 aa14.55□□□□□ -0.08
EPHB4-208ENST00000492403 IRF6O14896 467 aa14.54□□□□□ -0.08
EPHB4-208ENST00000492403 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
EPHB4-208ENST00000492403 ZNF772Q68DY9 489 aaPredicted RBP14.54□□□□□ -0.08
EPHB4-208ENST00000492403 BRINP3Q76B58 766 aa14.54□□□□□ -0.08
EPHB4-208ENST00000492403 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
EPHB4-208ENST00000492403 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
EPHB4-208ENST00000492403 XRN1Q8IZH2 1706 aaKnown RBP14.53□□□□□ -0.08
EPHB4-208ENST00000492403 NRXN3Q9Y4C0 1643 aa14.53□□□□□ -0.08
EPHB4-208ENST00000492403 DSG2Q14126 1118 aa14.53□□□□□ -0.08
EPHB4-208ENST00000492403 LRRC59Q96AG4 307 aaKnown RBP14.53□□□□□ -0.08
EPHB4-208ENST00000492403 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.08
EPHB4-208ENST00000492403 FXR2P51116 673 aaKnown RBP eCLIP14.52□□□□□ -0.09
EPHB4-208ENST00000492403 RGS17Q9UGC6 210 aaPredicted RBP14.52□□□□□ -0.09
EPHB4-208ENST00000492403 AHDC1Q5TGY3 1603 aaPredicted RBP14.52□□□□□ -0.09
EPHB4-208ENST00000492403 GRXCR2A6NFK2 248 aa14.51□□□□□ -0.09
EPHB4-208ENST00000492403 PDIA4P13667 645 aaKnown RBP14.51□□□□□ -0.09
EPHB4-208ENST00000492403 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
EPHB4-208ENST00000492403 PHF12Q96QT6 1004 aa14.51□□□□□ -0.09
EPHB4-208ENST00000492403 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
EPHB4-208ENST00000492403 ADGRL3Q9HAR2 1447 aa14.5□□□□□ -0.09
EPHB4-208ENST00000492403 SHPRHQ149N8 1683 aa14.49□□□□□ -0.09
EPHB4-208ENST00000492403 GOPCQ9HD26 462 aa14.49□□□□□ -0.09
EPHB4-208ENST00000492403 ASXL1Q8IXJ9 1541 aa14.49□□□□□ -0.09
EPHB4-208ENST00000492403 PPLO60437 1756 aa14.48□□□□□ -0.09
EPHB4-208ENST00000492403 GNPATO15228 680 aa14.48□□□□□ -0.09
EPHB4-208ENST00000492403 STK26Q9P289 416 aa14.48□□□□□ -0.09
EPHB4-208ENST00000492403 MST1RQ04912 1400 aa14.48□□□□□ -0.09
EPHB4-208ENST00000492403 DIEXFQ68CQ4 756 aaKnown RBP14.47□□□□□ -0.09
EPHB4-208ENST00000492403 TMC2Q8TDI7 906 aa14.47□□□□□ -0.09
EPHB4-208ENST00000492403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.09
EPHB4-208ENST00000492403 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
EPHB4-208ENST00000492403 NALCNQ8IZF0 1738 aa14.46□□□□□ -0.09
EPHB4-208ENST00000492403 ZBTB7CA1YPR0 619 aa14.46□□□□□ -0.09
EPHB4-208ENST00000492403 ONECUT3O60422 494 aaPredicted RBP14.46□□□□□ -0.09
EPHB4-208ENST00000492403 TTLL12Q14166 644 aaPredicted RBP14.46□□□□□ -0.09
EPHB4-208ENST00000492403 PTCH1Q13635 1447 aa14.46□□□□□ -0.09
EPHB4-208ENST00000492403 A6NJR5 290 aa14.45□□□□□ -0.1
EPHB4-208ENST00000492403 SETD1AO15047 1707 aaKnown RBP14.45□□□□□ -0.1
EPHB4-208ENST00000492403 RXRBP28702 533 aa14.45□□□□□ -0.1
EPHB4-208ENST00000492403 FOXK1P85037 733 aa14.44□□□□□ -0.1
EPHB4-208ENST00000492403 ESCO1Q5FWF5 840 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms