RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
SMARCB1-207ENST00000491967 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-207ENST00000491967 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-207ENST00000491967 NBPF8Q3BBV2 869 aa12.13□□□□□ -0.47
SMARCB1-207ENST00000491967 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
SMARCB1-207ENST00000491967 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
SMARCB1-207ENST00000491967 ACEP12821 1306 aa12.11□□□□□ -0.47
SMARCB1-207ENST00000491967 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-207ENST00000491967 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
SMARCB1-207ENST00000491967 SEPT12Q8IYM1 358 aa12.11□□□□□ -0.47
SMARCB1-207ENST00000491967 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
SMARCB1-207ENST00000491967 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
SMARCB1-207ENST00000491967 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
SMARCB1-207ENST00000491967 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
SMARCB1-207ENST00000491967 PHRF1Q9P1Y6 1649 aaKnown RBP12.09□□□□□ -0.47
SMARCB1-207ENST00000491967 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
SMARCB1-207ENST00000491967 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
SMARCB1-207ENST00000491967 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
SMARCB1-207ENST00000491967 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
SMARCB1-207ENST00000491967 SSH2Q76I76 1423 aa12.08□□□□□ -0.48
SMARCB1-207ENST00000491967 USP19O94966 1318 aa12.08□□□□□ -0.48
SMARCB1-207ENST00000491967 CPDO75976 1380 aa12.07□□□□□ -0.48
SMARCB1-207ENST00000491967 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
SMARCB1-207ENST00000491967 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
SMARCB1-207ENST00000491967 PPIP5K1Q6PFW1 1433 aa12.06□□□□□ -0.48
SMARCB1-207ENST00000491967 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
SMARCB1-207ENST00000491967 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
SMARCB1-207ENST00000491967 PRDM11Q9NQV5 511 aa12.06□□□□□ -0.48
SMARCB1-207ENST00000491967 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
SMARCB1-207ENST00000491967 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-207ENST00000491967 LMO7Q8WWI1 1683 aa12.05□□□□□ -0.48
SMARCB1-207ENST00000491967 SPATA31A1Q5TZJ5 1347 aa12.05□□□□□ -0.48
SMARCB1-207ENST00000491967 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
SMARCB1-207ENST00000491967 USP6P35125 1406 aa12.04□□□□□ -0.48
SMARCB1-207ENST00000491967 CAMTA1Q9Y6Y1 1673 aa12.04□□□□□ -0.48
SMARCB1-207ENST00000491967 ABTB2Q8N961 1025 aa12.04□□□□□ -0.48
SMARCB1-207ENST00000491967 CABP1Q9NZU7 370 aa12.04□□□□□ -0.48
SMARCB1-207ENST00000491967 EVC2Q86UK5 1308 aa12.04□□□□□ -0.48
SMARCB1-207ENST00000491967 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
SMARCB1-207ENST00000491967 GCP02774 474 aa12.03□□□□□ -0.48
SMARCB1-207ENST00000491967 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
SMARCB1-207ENST00000491967 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-207ENST00000491967 NLRP13Q86W25 1043 aa12.03□□□□□ -0.48
SMARCB1-207ENST00000491967 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-207ENST00000491967 ROCK2O75116 1388 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-207ENST00000491967 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
SMARCB1-207ENST00000491967 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
SMARCB1-207ENST00000491967 NUTM2GQ5VZR2 741 aa12.02□□□□□ -0.49
SMARCB1-207ENST00000491967 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
SMARCB1-207ENST00000491967 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
SMARCB1-207ENST00000491967 SLIT3O75094 1523 aa12.01□□□□□ -0.49
SMARCB1-207ENST00000491967 AKAP12Q02952 1782 aa12.01□□□□□ -0.49
SMARCB1-207ENST00000491967 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
SMARCB1-207ENST00000491967 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
SMARCB1-207ENST00000491967 COL18A1P39060 1754 aa12□□□□□ -0.49
SMARCB1-207ENST00000491967 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
SMARCB1-207ENST00000491967 DEFB132Q7Z7B7 95 aa12□□□□□ -0.49
SMARCB1-207ENST00000491967 PIK3C2AO00443 1686 aa12□□□□□ -0.49
SMARCB1-207ENST00000491967 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
SMARCB1-207ENST00000491967 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
SMARCB1-207ENST00000491967 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
SMARCB1-207ENST00000491967 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-207ENST00000491967 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-207ENST00000491967 THRAP3Q9Y2W1 955 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-207ENST00000491967 COL5A2P05997 1499 aaPredicted RBP11.97□□□□□ -0.49
SMARCB1-207ENST00000491967 TTC21BQ7Z4L5 1316 aa11.97□□□□□ -0.49
SMARCB1-207ENST00000491967 NLRP6P59044 892 aa11.97□□□□□ -0.49
SMARCB1-207ENST00000491967 TCP11L2Q8N4U5 519 aa11.97□□□□□ -0.49
SMARCB1-207ENST00000491967 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
SMARCB1-207ENST00000491967 CD163L1Q9NR16 1453 aa11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 TTC21AQ8NDW8 1320 aa11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 EVA1CP58658 441 aa11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 SF3B2Q13435 895 aaKnown RBP11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 MON2Q7Z3U7 1717 aa11.96□□□□□ -0.49
SMARCB1-207ENST00000491967 USP54Q70EL1 1684 aa11.96□□□□□ -0.5
SMARCB1-207ENST00000491967 PARP4Q9UKK3 1724 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-207ENST00000491967 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
SMARCB1-207ENST00000491967 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
SMARCB1-207ENST00000491967 CARD11Q9BXL7 1154 aa11.95□□□□□ -0.5
SMARCB1-207ENST00000491967 CRB1P82279 1406 aa11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 USP31Q70CQ4 1352 aa11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 A0A0G2JS52 829 aa11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 BAG6P46379 1132 aa11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 MYT1Q01538 1121 aa11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 AXIN2Q9Y2T1 843 aa11.94□□□□□ -0.5
SMARCB1-207ENST00000491967 NFAT5O94916 1531 aa11.93□□□□□ -0.5
SMARCB1-207ENST00000491967 KCNH5Q8NCM2 988 aa11.93□□□□□ -0.5
SMARCB1-207ENST00000491967 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
SMARCB1-207ENST00000491967 TESK2Q96S53 571 aa11.93□□□□□ -0.5
SMARCB1-207ENST00000491967 KTN1Q86UP2 1357 aaKnown RBP11.92□□□□□ -0.5
SMARCB1-207ENST00000491967 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
SMARCB1-207ENST00000491967 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
SMARCB1-207ENST00000491967 ABCC6O95255 1503 aa11.92□□□□□ -0.5
SMARCB1-207ENST00000491967 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
SMARCB1-207ENST00000491967 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
SMARCB1-207ENST00000491967 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-207ENST00000491967 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms