RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
NUP50-217ENST00000491860 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
NUP50-217ENST00000491860 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
NUP50-217ENST00000491860 BAG6P46379 1132 aa12.61□□□□□ -0.39
NUP50-217ENST00000491860 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
NUP50-217ENST00000491860 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
NUP50-217ENST00000491860 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
NUP50-217ENST00000491860 CDK19Q9BWU1 502 aa12.6□□□□□ -0.39
NUP50-217ENST00000491860 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
NUP50-217ENST00000491860 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
NUP50-217ENST00000491860 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
NUP50-217ENST00000491860 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
NUP50-217ENST00000491860 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
NUP50-217ENST00000491860 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
NUP50-217ENST00000491860 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
NUP50-217ENST00000491860 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
NUP50-217ENST00000491860 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
NUP50-217ENST00000491860 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
NUP50-217ENST00000491860 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
NUP50-217ENST00000491860 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
NUP50-217ENST00000491860 THSD7AQ9UPZ6 1657 aa12.56□□□□□ -0.4
NUP50-217ENST00000491860 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
NUP50-217ENST00000491860 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
NUP50-217ENST00000491860 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
NUP50-217ENST00000491860 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
NUP50-217ENST00000491860 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
NUP50-217ENST00000491860 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
NUP50-217ENST00000491860 ACEP12821 1306 aa12.55□□□□□ -0.4
NUP50-217ENST00000491860 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
NUP50-217ENST00000491860 L3MBTL2Q969R5 705 aa12.54□□□□□ -0.4
NUP50-217ENST00000491860 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
NUP50-217ENST00000491860 TRPM1Q7Z4N2 1603 aa12.53□□□□□ -0.4
NUP50-217ENST00000491860 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
NUP50-217ENST00000491860 FAM98CQ17RN3 349 aaKnown RBP12.53□□□□□ -0.4
NUP50-217ENST00000491860 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
NUP50-217ENST00000491860 A0A0G2JS52 829 aa12.52□□□□□ -0.41
NUP50-217ENST00000491860 MYT1Q01538 1121 aa12.52□□□□□ -0.41
NUP50-217ENST00000491860 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
NUP50-217ENST00000491860 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
NUP50-217ENST00000491860 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
NUP50-217ENST00000491860 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
NUP50-217ENST00000491860 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
NUP50-217ENST00000491860 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
NUP50-217ENST00000491860 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
NUP50-217ENST00000491860 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
NUP50-217ENST00000491860 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
NUP50-217ENST00000491860 CPDO75976 1380 aa12.5□□□□□ -0.41
NUP50-217ENST00000491860 RREB1Q92766 1687 aa12.49□□□□□ -0.41
NUP50-217ENST00000491860 USP19O94966 1318 aa12.49□□□□□ -0.41
NUP50-217ENST00000491860 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
NUP50-217ENST00000491860 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
NUP50-217ENST00000491860 NRKQ7Z2Y5 1582 aa12.48□□□□□ -0.41
NUP50-217ENST00000491860 EVA1CP58658 441 aa12.48□□□□□ -0.41
NUP50-217ENST00000491860 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
NUP50-217ENST00000491860 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
NUP50-217ENST00000491860 USP6P35125 1406 aa12.47□□□□□ -0.41
NUP50-217ENST00000491860 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
NUP50-217ENST00000491860 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
NUP50-217ENST00000491860 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
NUP50-217ENST00000491860 SIN3AQ96ST3 1273 aa12.47□□□□□ -0.41
NUP50-217ENST00000491860 THRAP3Q9Y2W1 955 aaKnown RBP12.47□□□□□ -0.41
NUP50-217ENST00000491860 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
NUP50-217ENST00000491860 GCP02774 474 aa12.46□□□□□ -0.41
NUP50-217ENST00000491860 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.41
NUP50-217ENST00000491860 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
NUP50-217ENST00000491860 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.41
NUP50-217ENST00000491860 BARGINQ6ZT62 677 aa12.46□□□□□ -0.41
NUP50-217ENST00000491860 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
NUP50-217ENST00000491860 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 CHRNA2Q15822 529 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
NUP50-217ENST00000491860 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
NUP50-217ENST00000491860 NLRP6P59044 892 aa12.44□□□□□ -0.42
NUP50-217ENST00000491860 KCNH5Q8NCM2 988 aa12.44□□□□□ -0.42
NUP50-217ENST00000491860 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
NUP50-217ENST00000491860 SLIT3O75094 1523 aa12.43□□□□□ -0.42
NUP50-217ENST00000491860 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
NUP50-217ENST00000491860 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
NUP50-217ENST00000491860 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
NUP50-217ENST00000491860 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
NUP50-217ENST00000491860 TRIM37O94972 964 aa12.42□□□□□ -0.42
NUP50-217ENST00000491860 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
NUP50-217ENST00000491860 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
NUP50-217ENST00000491860 COL5A2P05997 1499 aaPredicted RBP12.41□□□□□ -0.42
NUP50-217ENST00000491860 APBA3O96018 575 aa12.41□□□□□ -0.42
NUP50-217ENST00000491860 YY1P25490 414 aa12.41□□□□□ -0.42
NUP50-217ENST00000491860 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
NUP50-217ENST00000491860 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
NUP50-217ENST00000491860 CRB1P82279 1406 aa12.4□□□□□ -0.42
NUP50-217ENST00000491860 CPSF1Q10570 1443 aaKnown RBP12.4□□□□□ -0.42
NUP50-217ENST00000491860 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
NUP50-217ENST00000491860 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
NUP50-217ENST00000491860 ABCC6O95255 1503 aa12.4□□□□□ -0.42
NUP50-217ENST00000491860 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.42
NUP50-217ENST00000491860 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.42
NUP50-217ENST00000491860 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms