RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
BRCA1-219ENST00000491747 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
BRCA1-219ENST00000491747 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
BRCA1-219ENST00000491747 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
BRCA1-219ENST00000491747 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
BRCA1-219ENST00000491747 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
BRCA1-219ENST00000491747 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-219ENST00000491747 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
BRCA1-219ENST00000491747 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
BRCA1-219ENST00000491747 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
BRCA1-219ENST00000491747 AFF2P51816 1311 aa13.09□□□□□ -0.31
BRCA1-219ENST00000491747 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
BRCA1-219ENST00000491747 CD163L1Q9NR16 1453 aa13.08□□□□□ -0.32
BRCA1-219ENST00000491747 USP6P35125 1406 aa13.08□□□□□ -0.32
BRCA1-219ENST00000491747 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
BRCA1-219ENST00000491747 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
BRCA1-219ENST00000491747 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
BRCA1-219ENST00000491747 NUTM2GQ5VZR2 741 aa13.07□□□□□ -0.32
BRCA1-219ENST00000491747 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
BRCA1-219ENST00000491747 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
BRCA1-219ENST00000491747 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
BRCA1-219ENST00000491747 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
BRCA1-219ENST00000491747 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
BRCA1-219ENST00000491747 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
BRCA1-219ENST00000491747 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
BRCA1-219ENST00000491747 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
BRCA1-219ENST00000491747 TMF1P82094 1093 aa13.04□□□□□ -0.32
BRCA1-219ENST00000491747 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-219ENST00000491747 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
BRCA1-219ENST00000491747 MYOM1P52179 1685 aa13.04□□□□□ -0.32
BRCA1-219ENST00000491747 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-219ENST00000491747 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-219ENST00000491747 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-219ENST00000491747 KTN1Q86UP2 1357 aaKnown RBP13.03□□□□□ -0.32
BRCA1-219ENST00000491747 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
BRCA1-219ENST00000491747 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-219ENST00000491747 SLIT2O94813 1529 aa13.03□□□□□ -0.32
BRCA1-219ENST00000491747 FAM83GA6ND36 823 aa13.02□□□□□ -0.32
BRCA1-219ENST00000491747 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.32
BRCA1-219ENST00000491747 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.32
BRCA1-219ENST00000491747 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
BRCA1-219ENST00000491747 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
BRCA1-219ENST00000491747 USP21Q9UK80 565 aa13.02□□□□□ -0.33
BRCA1-219ENST00000491747 A0A1W2PP64 1363 aa13.02□□□□□ -0.33
BRCA1-219ENST00000491747 NWD2Q9ULI1 1742 aa13.01□□□□□ -0.33
BRCA1-219ENST00000491747 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
BRCA1-219ENST00000491747 USP19O94966 1318 aa13.01□□□□□ -0.33
BRCA1-219ENST00000491747 NRAPQ86VF7 1730 aa13.01□□□□□ -0.33
BRCA1-219ENST00000491747 COL14A1Q05707 1796 aaKnown RBP13.01□□□□□ -0.33
BRCA1-219ENST00000491747 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
BRCA1-219ENST00000491747 SLIT3O75094 1523 aa12.99□□□□□ -0.33
BRCA1-219ENST00000491747 NLRP6P59044 892 aa12.99□□□□□ -0.33
BRCA1-219ENST00000491747 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
BRCA1-219ENST00000491747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRCA1-219ENST00000491747 ATRNO75882 1429 aa12.99□□□□□ -0.33
BRCA1-219ENST00000491747 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
BRCA1-219ENST00000491747 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
BRCA1-219ENST00000491747 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-219ENST00000491747 KIAA0232Q92628 1395 aa12.98□□□□□ -0.33
BRCA1-219ENST00000491747 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
BRCA1-219ENST00000491747 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
BRCA1-219ENST00000491747 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-219ENST00000491747 TERF2IPQ9NYB0 399 aa12.98□□□□□ -0.33
BRCA1-219ENST00000491747 GCP02774 474 aa12.98□□□□□ -0.33
BRCA1-219ENST00000491747 NME9Q86XW9 330 aa12.98□□□□□ -0.33
BRCA1-219ENST00000491747 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
BRCA1-219ENST00000491747 RXRBP28702 533 aa12.97□□□□□ -0.33
BRCA1-219ENST00000491747 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
BRCA1-219ENST00000491747 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
BRCA1-219ENST00000491747 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
BRCA1-219ENST00000491747 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
BRCA1-219ENST00000491747 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-219ENST00000491747 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
BRCA1-219ENST00000491747 GLI3P10071 1580 aa12.96□□□□□ -0.33
BRCA1-219ENST00000491747 BTG4Q9NY30 223 aa12.96□□□□□ -0.33
BRCA1-219ENST00000491747 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
BRCA1-219ENST00000491747 COL18A1P39060 1754 aa12.95□□□□□ -0.34
BRCA1-219ENST00000491747 RGPD5Q99666 1765 aa12.95□□□□□ -0.34
BRCA1-219ENST00000491747 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
BRCA1-219ENST00000491747 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
BRCA1-219ENST00000491747 NFAT5O94916 1531 aa12.94□□□□□ -0.34
BRCA1-219ENST00000491747 CPDO75976 1380 aa12.94□□□□□ -0.34
BRCA1-219ENST00000491747 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
BRCA1-219ENST00000491747 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
BRCA1-219ENST00000491747 CARD14Q9BXL6 1004 aa12.94□□□□□ -0.34
BRCA1-219ENST00000491747 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
BRCA1-219ENST00000491747 RGS12O14924 1447 aa12.94□□□□□ -0.34
BRCA1-219ENST00000491747 SOCS7O14512 581 aa12.93□□□□□ -0.34
BRCA1-219ENST00000491747 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-219ENST00000491747 KIF20BQ96Q89 1820 aa12.93□□□□□ -0.34
BRCA1-219ENST00000491747 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-219ENST00000491747 SOX12O15370 315 aa12.93□□□□□ -0.34
BRCA1-219ENST00000491747 LTN1O94822 1766 aa12.93□□□□□ -0.34
BRCA1-219ENST00000491747 VPS72Q15906 364 aa12.92□□□□□ -0.34
BRCA1-219ENST00000491747 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
BRCA1-219ENST00000491747 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
BRCA1-219ENST00000491747 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
BRCA1-219ENST00000491747 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
BRCA1-219ENST00000491747 FYB1O15117 783 aa12.9□□□□□ -0.34
BRCA1-219ENST00000491747 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms