RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
EXD3-212ENST00000491734 WASLO00401 505 aaPredicted RBP23.47■■□□□ 1.35
EXD3-212ENST00000491734 ROBO2Q9HCK4 1378 aa23.47■■□□□ 1.35
EXD3-212ENST00000491734 SETD1BQ9UPS6 1966 aaKnown RBP23.47■■□□□ 1.35
EXD3-212ENST00000491734 TRMT2AQ8IZ69 625 aaKnown RBP23.46■■□□□ 1.35
EXD3-212ENST00000491734 ADGRB2O60241 1585 aa23.46■■□□□ 1.35
EXD3-212ENST00000491734 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
EXD3-212ENST00000491734 TBX22Q9Y458 520 aa23.45■■□□□ 1.35
EXD3-212ENST00000491734 ANKRD26Q9UPS8 1709 aa23.45■■□□□ 1.35
EXD3-212ENST00000491734 ATP7BP35670 1465 aa23.45■■□□□ 1.34
EXD3-212ENST00000491734 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
EXD3-212ENST00000491734 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
EXD3-212ENST00000491734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.44■■□□□ 1.34
EXD3-212ENST00000491734 SLC26A8Q96RN1 970 aa23.44■■□□□ 1.34
EXD3-212ENST00000491734 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.44■■□□□ 1.34
EXD3-212ENST00000491734 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
EXD3-212ENST00000491734 NEUROD2Q15784 382 aa23.43■■□□□ 1.34
EXD3-212ENST00000491734 WWC1Q8IX03 1113 aa23.42■■□□□ 1.34
EXD3-212ENST00000491734 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
EXD3-212ENST00000491734 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
EXD3-212ENST00000491734 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
EXD3-212ENST00000491734 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
EXD3-212ENST00000491734 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
EXD3-212ENST00000491734 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
EXD3-212ENST00000491734 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
EXD3-212ENST00000491734 PPIP5K1Q6PFW1 1433 aa23.4■■□□□ 1.34
EXD3-212ENST00000491734 E9PSI1 815 aa23.4■■□□□ 1.34
EXD3-212ENST00000491734 XRN1Q8IZH2 1706 aaKnown RBP23.39■■□□□ 1.34
EXD3-212ENST00000491734 PTCH1Q13635 1447 aa23.39■■□□□ 1.34
EXD3-212ENST00000491734 C20orf194Q5TEA3 1177 aa23.39■■□□□ 1.33
EXD3-212ENST00000491734 KDM2BQ8NHM5 1336 aa23.39■■□□□ 1.33
EXD3-212ENST00000491734 IQSEC2Q5JU85 1478 aa23.39■■□□□ 1.33
EXD3-212ENST00000491734 FBLN1P23142 703 aa23.38■■□□□ 1.33
EXD3-212ENST00000491734 CRBNQ96SW2 442 aa23.38■■□□□ 1.33
EXD3-212ENST00000491734 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
EXD3-212ENST00000491734 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
EXD3-212ENST00000491734 AMOTL2Q9Y2J4 779 aa23.36■■□□□ 1.33
EXD3-212ENST00000491734 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
EXD3-212ENST00000491734 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
EXD3-212ENST00000491734 IL27Q8NEV9 243 aa23.35■■□□□ 1.33
EXD3-212ENST00000491734 PRR36Q9H6K5 1346 aa23.35■■□□□ 1.33
EXD3-212ENST00000491734 NKTRP30414 1462 aaKnown RBP23.34■■□□□ 1.33
EXD3-212ENST00000491734 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
EXD3-212ENST00000491734 PIK3R4Q99570 1358 aa23.34■■□□□ 1.33
EXD3-212ENST00000491734 MON2Q7Z3U7 1717 aa23.34■■□□□ 1.33
EXD3-212ENST00000491734 TOPAZ1Q8N9V7 1692 aa23.34■■□□□ 1.33
EXD3-212ENST00000491734 CCDC61Q9Y6R9 512 aa23.34■■□□□ 1.33
EXD3-212ENST00000491734 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
EXD3-212ENST00000491734 ZRANB1Q9UGI0 708 aa23.33■■□□□ 1.33
EXD3-212ENST00000491734 CENPQQ7L2Z9 268 aaPredicted RBP23.33■■□□□ 1.32
EXD3-212ENST00000491734 NME9Q86XW9 330 aa23.33■■□□□ 1.32
EXD3-212ENST00000491734 ITSN1Q15811 1721 aa23.32■■□□□ 1.32
EXD3-212ENST00000491734 ANKLE2Q86XL3 938 aa23.31■■□□□ 1.32
EXD3-212ENST00000491734 EDC4Q6P2E9 1401 aaKnown RBP23.3■■□□□ 1.32
EXD3-212ENST00000491734 NUTM2FA1L443 756 aa23.3■■□□□ 1.32
EXD3-212ENST00000491734 BCAR3O75815 825 aa23.3■■□□□ 1.32
EXD3-212ENST00000491734 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
EXD3-212ENST00000491734 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
EXD3-212ENST00000491734 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
EXD3-212ENST00000491734 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
EXD3-212ENST00000491734 DIAPH1O60610 1272 aaKnown RBP23.28■■□□□ 1.32
EXD3-212ENST00000491734 GSE1Q14687 1217 aa23.27■■□□□ 1.32
EXD3-212ENST00000491734 CCDC27Q2M243 656 aa23.27■■□□□ 1.32
EXD3-212ENST00000491734 WDR63Q8IWG1 891 aa23.27■■□□□ 1.32
EXD3-212ENST00000491734 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.25■■□□□ 1.31
EXD3-212ENST00000491734 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
EXD3-212ENST00000491734 NFKBIBQ15653 356 aa23.24■■□□□ 1.31
EXD3-212ENST00000491734 FAM161AQ3B820 660 aa23.24■■□□□ 1.31
EXD3-212ENST00000491734 EMILIN1Q9Y6C2 1016 aa23.24■■□□□ 1.31
EXD3-212ENST00000491734 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
EXD3-212ENST00000491734 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
EXD3-212ENST00000491734 KCNA6P17658 529 aa23.23■■□□□ 1.31
EXD3-212ENST00000491734 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
EXD3-212ENST00000491734 TMPOP42166 694 aaKnown RBP23.22■■□□□ 1.31
EXD3-212ENST00000491734 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
EXD3-212ENST00000491734 PRKCSHP14314 528 aaPredicted RBP23.21■■□□□ 1.31
EXD3-212ENST00000491734 C8orf34Q49A92 452 aa23.21■■□□□ 1.31
EXD3-212ENST00000491734 NCBP3Q53F19 620 aaKnown RBP23.21■■□□□ 1.31
EXD3-212ENST00000491734 COG3Q96JB2 828 aa23.21■■□□□ 1.31
EXD3-212ENST00000491734 MAPK8IP3Q9UPT6 1336 aa23.2■■□□□ 1.3
EXD3-212ENST00000491734 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
EXD3-212ENST00000491734 ACEP12821 1306 aa23.2■■□□□ 1.3
EXD3-212ENST00000491734 RGPD8O14715 1765 aaPredicted RBP23.19■■□□□ 1.3
EXD3-212ENST00000491734 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
EXD3-212ENST00000491734 MAP2P11137 1827 aaKnown RBP23.18■■□□□ 1.3
EXD3-212ENST00000491734 RRS1Q15050 365 aaKnown RBP23.18■■□□□ 1.3
EXD3-212ENST00000491734 NPHP4O75161 1426 aaPredicted RBP23.18■■□□□ 1.3
EXD3-212ENST00000491734 FMN2Q9NZ56 1722 aa23.17■■□□□ 1.3
EXD3-212ENST00000491734 DAXXQ9UER7 740 aaPredicted RBP23.17■■□□□ 1.3
EXD3-212ENST00000491734 TTC21BQ7Z4L5 1316 aa23.16■■□□□ 1.3
EXD3-212ENST00000491734 AATKQ6ZMQ8 1374 aa23.16■■□□□ 1.3
EXD3-212ENST00000491734 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
EXD3-212ENST00000491734 NALCNQ8IZF0 1738 aa23.15■■□□□ 1.3
EXD3-212ENST00000491734 RARSP54136 660 aaKnown RBP23.15■■□□□ 1.3
EXD3-212ENST00000491734 RIPK4P57078 832 aa23.15■■□□□ 1.3
EXD3-212ENST00000491734 MYH16Q9H6N6 1097 aa23.15■■□□□ 1.3
EXD3-212ENST00000491734 USP6P35125 1406 aa23.15■■□□□ 1.3
EXD3-212ENST00000491734 ANKARQ7Z5J8 1434 aa23.15■■□□□ 1.3
EXD3-212ENST00000491734 FCHSD2O94868 740 aa23.14■■□□□ 1.3
EXD3-212ENST00000491734 HMOX1P09601 288 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms