RNA–Protein interactions for RNA: ENST00000491381.5

SNX21-212, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-212ENST00000491381 NGDNQ8NEJ9 315 aaKnown RBP28.82■■■□□ 2.2
SNX21-212ENST00000491381 AATKQ6ZMQ8 1374 aa28.81■■■□□ 2.2
SNX21-212ENST00000491381 NME9Q86XW9 330 aa28.81■■■□□ 2.2
SNX21-212ENST00000491381 STRCP1A6NGW2 1772 aa28.81■■■□□ 2.2
SNX21-212ENST00000491381 PMFBP1Q8TBY8 1022 aa28.8■■■□□ 2.2
SNX21-212ENST00000491381 COG3Q96JB2 828 aa28.8■■■□□ 2.2
SNX21-212ENST00000491381 C14orf37Q86TY3 774 aa28.8■■■□□ 2.2
SNX21-212ENST00000491381 SHPRHQ149N8 1683 aa28.79■■■□□ 2.2
SNX21-212ENST00000491381 RBM33Q96EV2 1170 aaKnown RBP28.79■■■□□ 2.2
SNX21-212ENST00000491381 C19orf44Q9H6X5 657 aa28.79■■■□□ 2.2
SNX21-212ENST00000491381 DCCP43146 1447 aa28.78■■■□□ 2.2
SNX21-212ENST00000491381 PNPLA6Q8IY17 1366 aa28.77■■■□□ 2.2
SNX21-212ENST00000491381 PHF8Q9UPP1 1060 aa28.76■■■□□ 2.2
SNX21-212ENST00000491381 OVOS2A0A0J9YW53 1432 aa28.76■■■□□ 2.19
SNX21-212ENST00000491381 OVOS2Q6IE36 1432 aa28.76■■■□□ 2.19
SNX21-212ENST00000491381 SMG6Q86US8 1419 aaKnown RBP28.75■■■□□ 2.19
SNX21-212ENST00000491381 TMEM94Q12767 1356 aa28.75■■■□□ 2.19
SNX21-212ENST00000491381 COL3A1P02461 1466 aaPredicted RBP28.74■■■□□ 2.19
SNX21-212ENST00000491381 USP31Q70CQ4 1352 aa28.73■■■□□ 2.19
SNX21-212ENST00000491381 POLKQ9UBT6 870 aa28.71■■■□□ 2.19
SNX21-212ENST00000491381 ZRANB1Q9UGI0 708 aa28.71■■■□□ 2.19
SNX21-212ENST00000491381 NGEFQ8N5V2 710 aa28.69■■■□□ 2.18
SNX21-212ENST00000491381 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
SNX21-212ENST00000491381 MAP2P11137 1827 aaKnown RBP28.69■■■□□ 2.18
SNX21-212ENST00000491381 USP54Q70EL1 1684 aa28.68■■■□□ 2.18
SNX21-212ENST00000491381 PDE3BQ13370 1112 aa28.68■■■□□ 2.18
SNX21-212ENST00000491381 CDK12Q9NYV4 1490 aaPredicted RBP28.68■■■□□ 2.18
SNX21-212ENST00000491381 ESCO1Q5FWF5 840 aa28.67■■■□□ 2.18
SNX21-212ENST00000491381 GTF3C3Q9Y5Q9 886 aa28.67■■■□□ 2.18
SNX21-212ENST00000491381 DMRT2Q9Y5R5 561 aa28.67■■■□□ 2.18
SNX21-212ENST00000491381 C1orf167Q5SNV9 1468 aa28.67■■■□□ 2.18
SNX21-212ENST00000491381 LRRC7Q96NW7 1537 aa28.67■■■□□ 2.18
SNX21-212ENST00000491381 PIK3C2AO00443 1686 aa28.66■■■□□ 2.18
SNX21-212ENST00000491381 KIF1AQ12756 1690 aa28.66■■■□□ 2.18
SNX21-212ENST00000491381 ATF3P18847 181 aa28.64■■■□□ 2.18
SNX21-212ENST00000491381 DIAPH1O60610 1272 aaKnown RBP28.63■■■□□ 2.17
SNX21-212ENST00000491381 MST1RQ04912 1400 aa28.63■■■□□ 2.17
SNX21-212ENST00000491381 CADPS2Q86UW7 1296 aa28.62■■■□□ 2.17
SNX21-212ENST00000491381 MSH6P52701 1360 aa28.62■■■□□ 2.17
SNX21-212ENST00000491381 RUNDC1Q96C34 613 aa28.6■■■□□ 2.17
SNX21-212ENST00000491381 EMILIN1Q9Y6C2 1016 aa28.6■■■□□ 2.17
SNX21-212ENST00000491381 XIRP1Q702N8 1843 aaKnown RBP28.59■■■□□ 2.17
SNX21-212ENST00000491381 ORAI2Q96SN7 254 aa28.59■■■□□ 2.17
SNX21-212ENST00000491381 FBLN1P23142 703 aa28.58■■■□□ 2.17
SNX21-212ENST00000491381 NCBP3Q53F19 620 aaKnown RBP28.58■■■□□ 2.17
SNX21-212ENST00000491381 CCDC146Q8IYE0 955 aa28.58■■■□□ 2.17
SNX21-212ENST00000491381 U2AF1L5P0DN76 240 aaPredicted RBP28.58■■■□□ 2.17
SNX21-212ENST00000491381 U2AF1Q01081 240 aaKnown RBP eCLIP28.58■■■□□ 2.17
SNX21-212ENST00000491381 PSME1Q06323 249 aa28.58■■■□□ 2.17
SNX21-212ENST00000491381 ZNF335Q9H4Z2 1342 aaPredicted RBP28.56■■■□□ 2.16
SNX21-212ENST00000491381 ZNF521Q96K83 1311 aa28.55■■■□□ 2.16
SNX21-212ENST00000491381 APAF1O14727 1248 aa28.55■■■□□ 2.16
SNX21-212ENST00000491381 NLRP6P59044 892 aa28.55■■■□□ 2.16
SNX21-212ENST00000491381 RRS1Q15050 365 aaKnown RBP28.55■■■□□ 2.16
SNX21-212ENST00000491381 IQSEC2Q5JU85 1478 aa28.55■■■□□ 2.16
SNX21-212ENST00000491381 SENP3-EIF4A1A0A087X0R7 540 aa28.54■■■□□ 2.16
SNX21-212ENST00000491381 PPM1GO15355 546 aaPredicted RBP28.54■■■□□ 2.16
SNX21-212ENST00000491381 ABTB2Q8N961 1025 aa28.54■■■□□ 2.16
SNX21-212ENST00000491381 PNNQ9H307 717 aaKnown RBP28.54■■■□□ 2.16
SNX21-212ENST00000491381 MARF1Q9Y4F3 1742 aaKnown RBP28.54■■■□□ 2.16
SNX21-212ENST00000491381 SALL2Q9Y467 1007 aaPredicted RBP28.54■■■□□ 2.16
SNX21-212ENST00000491381 U2SURPO15042 1029 aaKnown RBP28.52■■■□□ 2.16
SNX21-212ENST00000491381 PAK3O75914 559 aaPredicted RBP28.52■■■□□ 2.16
SNX21-212ENST00000491381 KIF24Q5T7B8 1368 aa28.52■■■□□ 2.16
SNX21-212ENST00000491381 IL13P35225 146 aa28.51■■■□□ 2.15
SNX21-212ENST00000491381 FOXO3O43524 673 aa28.51■■■□□ 2.15
SNX21-212ENST00000491381 TRPM3Q9HCF6 1732 aaPredicted RBP28.5■■■□□ 2.15
SNX21-212ENST00000491381 FCHSD2O94868 740 aa28.49■■■□□ 2.15
SNX21-212ENST00000491381 SBNO1A3KN83 1393 aa28.48■■■□□ 2.15
SNX21-212ENST00000491381 PLEKHF1Q96S99 279 aa28.48■■■□□ 2.15
SNX21-212ENST00000491381 PEAK1Q9H792 1746 aa28.47■■■□□ 2.15
SNX21-212ENST00000491381 TCP11L2Q8N4U5 519 aa28.47■■■□□ 2.15
SNX21-212ENST00000491381 MAP3K19Q56UN5 1328 aa28.46■■■□□ 2.15
SNX21-212ENST00000491381 FLT4P35916 1363 aa28.46■■■□□ 2.15
SNX21-212ENST00000491381 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
SNX21-212ENST00000491381 KRT28Q7Z3Y7 464 aa28.46■■■□□ 2.15
SNX21-212ENST00000491381 GOLGA2Q08379 1002 aa28.44■■■□□ 2.14
SNX21-212ENST00000491381 PHF23Q9BUL5 403 aaPredicted RBP28.44■■■□□ 2.14
SNX21-212ENST00000491381 KCNH5Q8NCM2 988 aa28.43■■■□□ 2.14
SNX21-212ENST00000491381 NPHP3Q7Z494 1330 aa28.43■■■□□ 2.14
SNX21-212ENST00000491381 RSPH6AQ9H0K4 717 aa28.42■■■□□ 2.14
SNX21-212ENST00000491381 SUPT16HQ9Y5B9 1047 aaKnown RBP28.42■■■□□ 2.14
SNX21-212ENST00000491381 RTL1A6NKG5 1358 aa28.41■■■□□ 2.14
SNX21-212ENST00000491381 NUTM2GQ5VZR2 741 aa28.41■■■□□ 2.14
SNX21-212ENST00000491381 CDCA7LQ96GN5 454 aa28.41■■■□□ 2.14
SNX21-212ENST00000491381 MAPK8IP3Q9UPT6 1336 aa28.41■■■□□ 2.14
SNX21-212ENST00000491381 SLIT3O75094 1523 aa28.4■■■□□ 2.14
SNX21-212ENST00000491381 NFAT5O94916 1531 aa28.4■■■□□ 2.14
SNX21-212ENST00000491381 EIF4A2Q14240 407 aaKnown RBP28.4■■■□□ 2.14
SNX21-212ENST00000491381 NEFLP07196 543 aa28.4■■■□□ 2.14
SNX21-212ENST00000491381 WWC1Q8IX03 1113 aa28.4■■■□□ 2.14
SNX21-212ENST00000491381 ALS2Q96Q42 1657 aa28.39■■■□□ 2.14
SNX21-212ENST00000491381 SOX12O15370 315 aa28.39■■■□□ 2.13
SNX21-212ENST00000491381 AMPHP49418 695 aa28.39■■■□□ 2.13
SNX21-212ENST00000491381 USP19O94966 1318 aa28.38■■■□□ 2.13
SNX21-212ENST00000491381 HSP90AB2PQ58FF8 381 aa28.38■■■□□ 2.13
SNX21-212ENST00000491381 SLFN5Q08AF3 891 aa28.37■■■□□ 2.13
SNX21-212ENST00000491381 RGPD1P0DJD0 1748 aa28.36■■■□□ 2.13
SNX21-212ENST00000491381 NEFMP07197 916 aa28.36■■■□□ 2.13
SNX21-212ENST00000491381 XPCQ01831 940 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms