RNA–Protein interactions for RNA: ENST00000491123.5

SUCLG1-208, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 3

Gene SUCLG1, Length 1,073 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-208ENST00000491123 TIMP2P16035 220 aa14.26□□□□□ -0.13
SUCLG1-208ENST00000491123 MTMR2Q13614 643 aa14.26□□□□□ -0.13
SUCLG1-208ENST00000491123 MRPL14Q6P1L8 145 aaKnown RBP14.26□□□□□ -0.13
SUCLG1-208ENST00000491123 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■■■■ 45.5
SUCLG1-208ENST00000491123 PURBQ96QR8 312 aaKnown RBP14.24□□□□□ -0.13
SUCLG1-208ENST00000491123 SPDYE5A6NIY4 337 aa14.23□□□□□ -0.13
SUCLG1-208ENST00000491123 WDR4P57081 412 aaKnown RBP14.22□□□□□ -0.13
SUCLG1-208ENST00000491123 SOBPA7XYQ1 873 aa14.21□□□□□ -0.13
SUCLG1-208ENST00000491123 ADH1CP00326 375 aa14.21□□□□□ -0.13
SUCLG1-208ENST00000491123 SCARF1Q14162 830 aa14.21□□□□□ -0.13
SUCLG1-208ENST00000491123 LYPD8Q6UX82 237 aa14.2□□□□□ -0.14
SUCLG1-208ENST00000491123 TTLL12Q14166 644 aaPredicted RBP14.19□□□□□ -0.14
SUCLG1-208ENST00000491123 AMHR2Q16671 573 aa14.19□□□□□ -0.14
SUCLG1-208ENST00000491123 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
SUCLG1-208ENST00000491123 GIGYF2Q6Y7W6 1299 aaKnown RBP14.18□□□□□ -0.14
SUCLG1-208ENST00000491123 CDK15Q96Q40 435 aa14.18□□□□□ -0.14
SUCLG1-208ENST00000491123 CTHP32929 405 aa14.17□□□□□ -0.14
SUCLG1-208ENST00000491123 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
SUCLG1-208ENST00000491123 FAM174AQ8TBP5 190 aa14.17□□□□□ -0.14
SUCLG1-208ENST00000491123 FOXJ1Q92949 421 aa14.17□□□□□ -0.14
SUCLG1-208ENST00000491123 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
SUCLG1-208ENST00000491123 VSIG8P0DPA2 414 aa14.16□□□□□ -0.14
SUCLG1-208ENST00000491123 GJA5P36382 358 aa14.16□□□□□ -0.14
SUCLG1-208ENST00000491123 PCDHB15Q9Y5E8 787 aa14.16□□□□□ -0.14
SUCLG1-208ENST00000491123 CFAP99D6REC4 459 aa14.15□□□□□ -0.14
SUCLG1-208ENST00000491123 RSBN1LQ6PCB5 846 aaPredicted RBP14.15□□□□□ -0.14
SUCLG1-208ENST00000491123 TBC1D2Q9BYX2 928 aa14.14□□□□□ -0.15
SUCLG1-208ENST00000491123 ZMYND10O75800 440 aa14.13□□□□□ -0.15
SUCLG1-208ENST00000491123 F12P00748 615 aaPredicted RBP14.13□□□□□ -0.15
SUCLG1-208ENST00000491123 ZFAND3Q9H8U3 227 aa14.13□□□□□ -0.15
SUCLG1-208ENST00000491123 MAP10Q9P2G4 905 aa14.13□□□□□ -0.15
SUCLG1-208ENST00000491123 ITPKCQ96DU7 683 aa14.12□□□□□ -0.15
SUCLG1-208ENST00000491123 ZIC2O95409 532 aaPredicted RBP14.11□□□□□ -0.15
SUCLG1-208ENST00000491123 NR3C2P08235 984 aa14.11□□□□□ -0.15
SUCLG1-208ENST00000491123 ARID5BQ14865 1188 aa14.11□□□□□ -0.15
SUCLG1-208ENST00000491123 C4orf48Q5BLP8 95 aa14.11□□□□□ -0.15
SUCLG1-208ENST00000491123 HRCP23327 699 aa14.1□□□□□ -0.15
SUCLG1-208ENST00000491123 GRM5P41594 1212 aa14.1□□□□□ -0.15
SUCLG1-208ENST00000491123 SPTLC1O15269 473 aa14.09□□□□□ -0.15
SUCLG1-208ENST00000491123 NR5A1Q13285 461 aa14.07□□□□□ -0.16
SUCLG1-208ENST00000491123 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
SUCLG1-208ENST00000491123 DIXDC1Q155Q3 683 aa14.06□□□□□ -0.16
SUCLG1-208ENST00000491123 MAN1A2O60476 641 aa14.05□□□□□ -0.16
SUCLG1-208ENST00000491123 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
SUCLG1-208ENST00000491123 LOC100996750A0A140TA64 210 aa14.04□□□□□ -0.16
SUCLG1-208ENST00000491123 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
SUCLG1-208ENST00000491123 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
SUCLG1-208ENST00000491123 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
SUCLG1-208ENST00000491123 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
SUCLG1-208ENST00000491123 KRTAP4-6Q9BYQ5 205 aa14.04□□□□□ -0.16
SUCLG1-208ENST00000491123 ZC3H15Q8WU90 426 aaKnown RBP14.03□□□□□ -0.16
SUCLG1-208ENST00000491123 PRPF38BQ5VTL8 546 aaKnown RBP14.02□□□□□ -0.17
SUCLG1-208ENST00000491123 RIC3Q7Z5B4 369 aa14.02□□□□□ -0.17
SUCLG1-208ENST00000491123 BPHLQ86WA6 291 aaPredicted RBP14.01□□□□□ -0.17
SUCLG1-208ENST00000491123 AGERQ15109 404 aa14□□□□□ -0.17
SUCLG1-208ENST00000491123 MEIOBQ8N635 442 aa14□□□□□ -0.17
SUCLG1-208ENST00000491123 BMP2P12643 396 aa13.99□□□□□ -0.17
SUCLG1-208ENST00000491123 LINC00528Q8N1L1 170 aa13.99□□□□□ -0.17
SUCLG1-208ENST00000491123 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
SUCLG1-208ENST00000491123 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
SUCLG1-208ENST00000491123 GSK3AP49840 483 aa13.97□□□□□ -0.17
SUCLG1-208ENST00000491123 C1QTNF2Q9BXJ5 285 aa13.97□□□□□ -0.17
SUCLG1-208ENST00000491123 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.17
SUCLG1-208ENST00000491123 SH3RF1Q7Z6J0 888 aa13.96□□□□□ -0.17
SUCLG1-208ENST00000491123 TRIM66O15016 1216 aa13.95□□□□□ -0.18
SUCLG1-208ENST00000491123 UPP2O95045 317 aa13.95□□□□□ -0.18
SUCLG1-208ENST00000491123 KCNMA1Q12791 1236 aa13.95□□□□□ -0.18
SUCLG1-208ENST00000491123 QPCTQ16769 361 aa13.93□□□□□ -0.18
SUCLG1-208ENST00000491123 GPR161Q8N6U8 529 aaKnown RBP13.93□□□□□ -0.18
SUCLG1-208ENST00000491123 LIMD1Q9UGP4 676 aa13.93□□□□□ -0.18
SUCLG1-208ENST00000491123 FSHRP23945 695 aa13.92□□□□□ -0.18
SUCLG1-208ENST00000491123 KRT76Q01546 638 aa13.92□□□□□ -0.18
SUCLG1-208ENST00000491123 MAP4K5Q9Y4K4 846 aa13.92□□□□□ -0.18
SUCLG1-208ENST00000491123 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
SUCLG1-208ENST00000491123 TRMT44Q8IYL2 757 aaKnown RBP13.9□□□□□ -0.18
SUCLG1-208ENST00000491123 ARMC2Q8NEN0 867 aa13.9□□□□□ -0.18
SUCLG1-208ENST00000491123 TSC1Q92574 1164 aa13.9□□□□□ -0.18
SUCLG1-208ENST00000491123 LILRB3O75022 631 aa13.89□□□□□ -0.19
SUCLG1-208ENST00000491123 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
SUCLG1-208ENST00000491123 MYSM1Q5VVJ2 828 aa13.88□□□□□ -0.19
SUCLG1-208ENST00000491123 VASH1Q7L8A9 365 aaPredicted RBP13.88□□□□□ -0.19
SUCLG1-208ENST00000491123 SUZ12Q15022 739 aaKnown RBP13.87□□□□□ -0.19
SUCLG1-208ENST00000491123 TUSC1Q2TAM9 212 aa13.87□□□□□ -0.19
SUCLG1-208ENST00000491123 NUTM2BA6NNL0 878 aaPredicted RBP13.86□□□□□ -0.19
SUCLG1-208ENST00000491123 NUTM2EB1AL46 878 aaPredicted RBP13.86□□□□□ -0.19
SUCLG1-208ENST00000491123 NUTM2DQ5VT03 806 aaPredicted RBP13.86□□□□□ -0.19
SUCLG1-208ENST00000491123 NUTM2AQ8IVF1 878 aaPredicted RBP13.86□□□□□ -0.19
SUCLG1-208ENST00000491123 KCTD17Q8N5Z5 321 aa13.86□□□□□ -0.19
SUCLG1-208ENST00000491123 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
SUCLG1-208ENST00000491123 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
SUCLG1-208ENST00000491123 CCDC116Q8IYX3 515 aa13.85□□□□□ -0.19
SUCLG1-208ENST00000491123 MAGEB6P1A0A0J9YX57 407 aa13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 TTLL8A6PVC2 850 aa13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 PTSQ03393 145 aa13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.84□□□□□ -0.193e-7■■■■□ 20.7
SUCLG1-208ENST00000491123 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 AK7Q96M32 723 aa13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 CNTNAP3BQ96NU0 1288 aa13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 CNTNAP3Q9BZ76 1288 aa13.84□□□□□ -0.19
SUCLG1-208ENST00000491123 FIGNL2A6NMB9 653 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms