RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
SNX12-205ENST00000490561 RALBP1Q15311 655 aa18.04■□□□□ 0.48
SNX12-205ENST00000490561 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
SNX12-205ENST00000490561 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
SNX12-205ENST00000490561 NHSL1Q5SYE7 1610 aa18.02■□□□□ 0.48
SNX12-205ENST00000490561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNX12-205ENST00000490561 KIF20BQ96Q89 1820 aa18.02■□□□□ 0.47
SNX12-205ENST00000490561 PXDNQ92626 1479 aa18.01■□□□□ 0.47
SNX12-205ENST00000490561 FYB1O15117 783 aa18.01■□□□□ 0.47
SNX12-205ENST00000490561 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
SNX12-205ENST00000490561 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
SNX12-205ENST00000490561 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
SNX12-205ENST00000490561 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
SNX12-205ENST00000490561 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
SNX12-205ENST00000490561 PRKRIP1Q9H875 184 aaPredicted RBP18■□□□□ 0.47
SNX12-205ENST00000490561 USP31Q70CQ4 1352 aa18■□□□□ 0.47
SNX12-205ENST00000490561 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
SNX12-205ENST00000490561 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
SNX12-205ENST00000490561 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
SNX12-205ENST00000490561 COG3Q96JB2 828 aa17.99■□□□□ 0.47
SNX12-205ENST00000490561 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
SNX12-205ENST00000490561 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
SNX12-205ENST00000490561 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
SNX12-205ENST00000490561 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
SNX12-205ENST00000490561 USP54Q70EL1 1684 aa17.97■□□□□ 0.47
SNX12-205ENST00000490561 NME9Q86XW9 330 aa17.97■□□□□ 0.47
SNX12-205ENST00000490561 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
SNX12-205ENST00000490561 OVOS2A0A0J9YW53 1432 aa17.97■□□□□ 0.47
SNX12-205ENST00000490561 OVOS2Q6IE36 1432 aa17.97■□□□□ 0.47
SNX12-205ENST00000490561 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
SNX12-205ENST00000490561 NLRP13Q86W25 1043 aa17.96■□□□□ 0.47
SNX12-205ENST00000490561 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
SNX12-205ENST00000490561 PIK3C2AO00443 1686 aa17.96■□□□□ 0.47
SNX12-205ENST00000490561 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
SNX12-205ENST00000490561 XPCQ01831 940 aaPredicted RBP17.95■□□□□ 0.46
SNX12-205ENST00000490561 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
SNX12-205ENST00000490561 ALS2Q96Q42 1657 aa17.94■□□□□ 0.46
SNX12-205ENST00000490561 NLRP6P59044 892 aa17.94■□□□□ 0.46
SNX12-205ENST00000490561 DDX17Q92841 729 aaKnown RBP17.94■□□□□ 0.46
SNX12-205ENST00000490561 LRRC59Q96AG4 307 aaKnown RBP17.93■□□□□ 0.46
SNX12-205ENST00000490561 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
SNX12-205ENST00000490561 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
SNX12-205ENST00000490561 LMOD2Q6P5Q4 547 aa17.91■□□□□ 0.46
SNX12-205ENST00000490561 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
SNX12-205ENST00000490561 PHLPP1O60346 1717 aa17.91■□□□□ 0.46
SNX12-205ENST00000490561 MED1Q15648 1581 aaPredicted RBP17.91■□□□□ 0.46
SNX12-205ENST00000490561 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
SNX12-205ENST00000490561 USP19O94966 1318 aa17.9■□□□□ 0.46
SNX12-205ENST00000490561 SLIT3O75094 1523 aa17.89■□□□□ 0.45
SNX12-205ENST00000490561 FBXO41Q8TF61 875 aa17.89■□□□□ 0.45
SNX12-205ENST00000490561 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
SNX12-205ENST00000490561 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
SNX12-205ENST00000490561 MIER1Q8N108 512 aa17.88■□□□□ 0.45
SNX12-205ENST00000490561 ZRANB1Q9UGI0 708 aa17.88■□□□□ 0.45
SNX12-205ENST00000490561 NUTM2GQ5VZR2 741 aa17.86■□□□□ 0.45
SNX12-205ENST00000490561 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
SNX12-205ENST00000490561 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
SNX12-205ENST00000490561 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
SNX12-205ENST00000490561 SMG6Q86US8 1419 aaKnown RBP17.85■□□□□ 0.45
SNX12-205ENST00000490561 COL22A1Q8NFW1 1626 aaPredicted RBP17.84■□□□□ 0.45
SNX12-205ENST00000490561 CFAP53Q96M91 514 aa17.84■□□□□ 0.45
SNX12-205ENST00000490561 PNPLA6Q8IY17 1366 aa17.83■□□□□ 0.45
SNX12-205ENST00000490561 GCP02774 474 aa17.83■□□□□ 0.44
SNX12-205ENST00000490561 NFAT5O94916 1531 aa17.82■□□□□ 0.44
SNX12-205ENST00000490561 RTL1A6NKG5 1358 aa17.82■□□□□ 0.44
SNX12-205ENST00000490561 JCADQ9P266 1359 aa17.82■□□□□ 0.44
SNX12-205ENST00000490561 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
SNX12-205ENST00000490561 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
SNX12-205ENST00000490561 HAP1P54257 671 aaPredicted RBP17.81■□□□□ 0.44
SNX12-205ENST00000490561 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
SNX12-205ENST00000490561 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
SNX12-205ENST00000490561 MTHFSP49914 203 aa17.8■□□□□ 0.44
SNX12-205ENST00000490561 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
SNX12-205ENST00000490561 CPDO75976 1380 aa17.79■□□□□ 0.44
SNX12-205ENST00000490561 INSRP06213 1382 aa17.79■□□□□ 0.44
SNX12-205ENST00000490561 ABCC6O95255 1503 aa17.79■□□□□ 0.44
SNX12-205ENST00000490561 SOX12O15370 315 aa17.79■□□□□ 0.44
SNX12-205ENST00000490561 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
SNX12-205ENST00000490561 FLT4P35916 1363 aa17.79■□□□□ 0.44
SNX12-205ENST00000490561 AMPHP49418 695 aa17.78■□□□□ 0.44
SNX12-205ENST00000490561 RRS1Q15050 365 aaKnown RBP17.78■□□□□ 0.44
SNX12-205ENST00000490561 ARHGEF25Q86VW2 580 aa17.78■□□□□ 0.44
SNX12-205ENST00000490561 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
SNX12-205ENST00000490561 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
SNX12-205ENST00000490561 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
SNX12-205ENST00000490561 MAP2P11137 1827 aaKnown RBP17.77■□□□□ 0.43
SNX12-205ENST00000490561 HSPA1LP34931 641 aa17.76■□□□□ 0.43
SNX12-205ENST00000490561 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
SNX12-205ENST00000490561 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
SNX12-205ENST00000490561 CABLES1Q8TDN4 633 aa17.75■□□□□ 0.43
SNX12-205ENST00000490561 IP6K1Q92551 441 aa17.75■□□□□ 0.43
SNX12-205ENST00000490561 BLMP54132 1417 aaPredicted RBP17.74■□□□□ 0.43
SNX12-205ENST00000490561 FBLN1P23142 703 aa17.74■□□□□ 0.43
SNX12-205ENST00000490561 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
SNX12-205ENST00000490561 LTN1O94822 1766 aa17.74■□□□□ 0.43
SNX12-205ENST00000490561 DIAPH1O60610 1272 aaKnown RBP17.73■□□□□ 0.43
SNX12-205ENST00000490561 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
SNX12-205ENST00000490561 HOXC9P31274 260 aa17.73■□□□□ 0.43
SNX12-205ENST00000490561 COL3A1P02461 1466 aaPredicted RBP17.73■□□□□ 0.43
SNX12-205ENST00000490561 KIAA0232Q92628 1395 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms