RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SLIT2O94813 1529 aa21.95■■□□□ 1.1
PCCB-218ENST00000490504 TRPM3Q9HCF6 1732 aaPredicted RBP21.94■■□□□ 1.1
PCCB-218ENST00000490504 TRPM1Q7Z4N2 1603 aa21.94■■□□□ 1.1
PCCB-218ENST00000490504 FAM83GA6ND36 823 aa21.94■■□□□ 1.1
PCCB-218ENST00000490504 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
PCCB-218ENST00000490504 GJD4Q96KN9 370 aaPredicted RBP21.93■■□□□ 1.1
PCCB-218ENST00000490504 MARF1Q9Y4F3 1742 aaKnown RBP21.91■■□□□ 1.1
PCCB-218ENST00000490504 PPIP5K1Q6PFW1 1433 aa21.9■■□□□ 1.1
PCCB-218ENST00000490504 ALS2Q96Q42 1657 aa21.9■■□□□ 1.1
PCCB-218ENST00000490504 NUTM2GQ5VZR2 741 aa21.89■■□□□ 1.09
PCCB-218ENST00000490504 CABP1Q9NZU7 370 aa21.88■■□□□ 1.09
PCCB-218ENST00000490504 ITSN1Q15811 1721 aa21.88■■□□□ 1.09
PCCB-218ENST00000490504 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
PCCB-218ENST00000490504 TOPAZ1Q8N9V7 1692 aa21.88■■□□□ 1.09
PCCB-218ENST00000490504 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
PCCB-218ENST00000490504 QRICH2Q9H0J4 1663 aa21.87■■□□□ 1.09
PCCB-218ENST00000490504 VPS72Q15906 364 aa21.86■■□□□ 1.09
PCCB-218ENST00000490504 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
PCCB-218ENST00000490504 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
PCCB-218ENST00000490504 BTG4Q9NY30 223 aa21.84■■□□□ 1.09
PCCB-218ENST00000490504 EIF4G2P78344 907 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCCB-218ENST00000490504 ABTB2Q8N961 1025 aa21.84■■□□□ 1.09
PCCB-218ENST00000490504 CCDC9Q9Y3X0 531 aaKnown RBP21.83■■□□□ 1.08
PCCB-218ENST00000490504 PRDM11Q9NQV5 511 aa21.82■■□□□ 1.08
PCCB-218ENST00000490504 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.82■■□□□ 1.08
PCCB-218ENST00000490504 HSPA5P11021 654 aaKnown RBP21.81■■□□□ 1.08
PCCB-218ENST00000490504 GLI3P10071 1580 aa21.81■■□□□ 1.08
PCCB-218ENST00000490504 ZC3H6P61129 1189 aaKnown RBP21.8■■□□□ 1.08
PCCB-218ENST00000490504 ATAD2Q6PL18 1390 aa21.8■■□□□ 1.08
PCCB-218ENST00000490504 KIAA0232Q92628 1395 aa21.8■■□□□ 1.08
PCCB-218ENST00000490504 CHRNA2Q15822 529 aa21.79■■□□□ 1.08
PCCB-218ENST00000490504 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
PCCB-218ENST00000490504 SEPT12Q8IYM1 358 aa21.78■■□□□ 1.08
PCCB-218ENST00000490504 USP6P35125 1406 aa21.78■■□□□ 1.08
PCCB-218ENST00000490504 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.08
PCCB-218ENST00000490504 BRD4O60885 1362 aaPredicted RBP21.77■■□□□ 1.08
PCCB-218ENST00000490504 SBNO2Q9Y2G9 1366 aa21.77■■□□□ 1.08
PCCB-218ENST00000490504 USP19O94966 1318 aa21.77■■□□□ 1.08
PCCB-218ENST00000490504 ONECUT3O60422 494 aaPredicted RBP21.77■■□□□ 1.07
PCCB-218ENST00000490504 NLRP13Q86W25 1043 aa21.77■■□□□ 1.07
PCCB-218ENST00000490504 NWD2Q9ULI1 1742 aa21.76■■□□□ 1.07
PCCB-218ENST00000490504 COL14A1Q05707 1796 aaKnown RBP21.75■■□□□ 1.07
PCCB-218ENST00000490504 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
PCCB-218ENST00000490504 MIER1Q8N108 512 aa21.74■■□□□ 1.07
PCCB-218ENST00000490504 GCP02774 474 aa21.73■■□□□ 1.07
PCCB-218ENST00000490504 NLRP6P59044 892 aa21.73■■□□□ 1.07
PCCB-218ENST00000490504 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
PCCB-218ENST00000490504 FAM98CQ17RN3 349 aaKnown RBP21.73■■□□□ 1.07
PCCB-218ENST00000490504 SPATA31A5Q5VU36 1347 aa21.72■■□□□ 1.07
PCCB-218ENST00000490504 SPATA31A7Q8IWB4 1347 aa21.72■■□□□ 1.07
PCCB-218ENST00000490504 PHRF1Q9P1Y6 1649 aaKnown RBP21.71■■□□□ 1.07
PCCB-218ENST00000490504 NRAPQ86VF7 1730 aa21.71■■□□□ 1.07
PCCB-218ENST00000490504 STRN4Q9NRL3 753 aa21.71■■□□□ 1.07
PCCB-218ENST00000490504 USP47Q96K76 1375 aa21.71■■□□□ 1.07
PCCB-218ENST00000490504 TTC21BQ7Z4L5 1316 aa21.71■■□□□ 1.07
PCCB-218ENST00000490504 CPDO75976 1380 aa21.7■■□□□ 1.06
PCCB-218ENST00000490504 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
PCCB-218ENST00000490504 A0A0G2JS52 829 aa21.69■■□□□ 1.06
PCCB-218ENST00000490504 MYT1Q01538 1121 aa21.69■■□□□ 1.06
PCCB-218ENST00000490504 DDX10Q13206 875 aaKnown RBP21.69■■□□□ 1.06
PCCB-218ENST00000490504 CPSF1Q10570 1443 aaKnown RBP21.69■■□□□ 1.06
PCCB-218ENST00000490504 NRKQ7Z2Y5 1582 aa21.69■■□□□ 1.06
PCCB-218ENST00000490504 EP400Q96L91 3159 aa21.69■■□□□ 1.06
PCCB-218ENST00000490504 TESK2Q96S53 571 aa21.69■■□□□ 1.06
PCCB-218ENST00000490504 KRT27Q7Z3Y8 459 aa21.68■■□□□ 1.06
PCCB-218ENST00000490504 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
PCCB-218ENST00000490504 SLC12A5Q9H2X9 1139 aa21.67■■□□□ 1.06
PCCB-218ENST00000490504 SPATA31A1Q5TZJ5 1347 aa21.67■■□□□ 1.06
PCCB-218ENST00000490504 KTN1Q86UP2 1357 aaKnown RBP21.67■■□□□ 1.06
PCCB-218ENST00000490504 EVA1CP58658 441 aa21.66■■□□□ 1.06
PCCB-218ENST00000490504 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
PCCB-218ENST00000490504 WASHC2AQ641Q2 1341 aa21.65■■□□□ 1.06
PCCB-218ENST00000490504 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
PCCB-218ENST00000490504 CAMTA1Q9Y6Y1 1673 aa21.64■■□□□ 1.06
PCCB-218ENST00000490504 LARP1Q6PKG0 1096 aaKnown RBP21.64■■□□□ 1.05
PCCB-218ENST00000490504 CCDC125Q86Z20 511 aa21.64■■□□□ 1.05
PCCB-218ENST00000490504 PUS7Q96PZ0 661 aaKnown RBP21.64■■□□□ 1.05
PCCB-218ENST00000490504 USP35Q9P2H5 1018 aa21.63■■□□□ 1.05
PCCB-218ENST00000490504 CD163L1Q9NR16 1453 aa21.63■■□□□ 1.05
PCCB-218ENST00000490504 SLIT3O75094 1523 aa21.63■■□□□ 1.05
PCCB-218ENST00000490504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCCB-218ENST00000490504 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
PCCB-218ENST00000490504 ZRANB1Q9UGI0 708 aa21.62■■□□□ 1.05
PCCB-218ENST00000490504 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
PCCB-218ENST00000490504 SOX12O15370 315 aa21.61■■□□□ 1.05
PCCB-218ENST00000490504 BRWD3Q6RI45 1802 aa21.6■■□□□ 1.05
PCCB-218ENST00000490504 HDGFL2Q7Z4V5 671 aaPredicted RBP21.6■■□□□ 1.05
PCCB-218ENST00000490504 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
PCCB-218ENST00000490504 FAM182BQ5T319 152 aa21.59■■□□□ 1.05
PCCB-218ENST00000490504 BLMP54132 1417 aaPredicted RBP21.59■■□□□ 1.05
PCCB-218ENST00000490504 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.05
PCCB-218ENST00000490504 NME9Q86XW9 330 aa21.58■■□□□ 1.05
PCCB-218ENST00000490504 KCNH5Q8NCM2 988 aa21.58■■□□□ 1.05
PCCB-218ENST00000490504 LMO7Q8WWI1 1683 aa21.58■■□□□ 1.05
PCCB-218ENST00000490504 AKAP12Q02952 1782 aa21.58■■□□□ 1.05
PCCB-218ENST00000490504 TERF2IPQ9NYB0 399 aa21.58■■□□□ 1.04
PCCB-218ENST00000490504 AXIN2Q9Y2T1 843 aa21.58■■□□□ 1.04
PCCB-218ENST00000490504 C11orf95C9JLR9 678 aaPredicted RBP21.57■■□□□ 1.04
PCCB-218ENST00000490504 SLC24A1O60721 1099 aa21.57■■□□□ 1.04
PCCB-218ENST00000490504 BARGINQ6ZT62 677 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms