RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 FOSBP53539 338 aa3.87□□□□□ -1.79
EPB41-212ENST00000490308 TMEM164Q5U3C3 297 aa3.87□□□□□ -1.79
EPB41-212ENST00000490308 PLEKHM2Q8IWE5 1019 aa3.87□□□□□ -1.79
EPB41-212ENST00000490308 ZCRB1Q8TBF4 217 aaKnown RBP3.87□□□□□ -1.79
EPB41-212ENST00000490308 KDM4FA0A1W2PPD8 638 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 PLEKHD1A6NEE1 506 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 KDM4AO75164 1064 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 ATP2B4P23634 1241 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 DNAJB2P25686 324 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 MTMR2Q13614 643 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 QPCTQ16769 361 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 CDCA8Q53HL2 280 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 EAPPQ56P03 285 aaPredicted RBP3.86□□□□□ -1.79
EPB41-212ENST00000490308 KANK4Q5T7N3 995 aaPredicted RBP3.86□□□□□ -1.79
EPB41-212ENST00000490308 GPR153Q6NV75 609 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 PADI6Q6TGC4 694 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 NPAS4Q8IUM7 802 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 SLF2Q8IX21 1173 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 PRR7Q8TB68 274 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 ZDHHC16Q969W1 377 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 UCN2Q96RP3 112 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 ADAM33Q9BZ11 813 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 LHX6Q9UPM6 363 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 ERBB3P21860 1342 aa3.86□□□□□ -1.79
EPB41-212ENST00000490308 CARNS1A5YM72 827 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 DDX11L8A8MPP1 907 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 ATP2B1P20020 1258 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 ATP1A2P50993 1020 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 TSNAXIP1Q2TAA8 658 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 FAM161AQ3B820 660 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 RTL5Q5HYW3 569 aaPredicted RBP3.85□□□□□ -1.79
EPB41-212ENST00000490308 VARS2Q5ST30 1063 aaKnown RBP3.85□□□□□ -1.79
EPB41-212ENST00000490308 TBC1D9Q6ZT07 1266 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 TRIM50Q86XT4 487 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 GLYCTKQ8IVS8 523 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 SLC43A3Q8NBI5 491 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 RNF166Q96A37 237 aaPredicted RBP3.85□□□□□ -1.79
EPB41-212ENST00000490308 ASB16Q96NS5 453 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 TANGO6Q9C0B7 1094 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 MYH16Q9H6N6 1097 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 ZSWIM6Q9HCJ5 1215 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 DCTN4Q9UJW0 460 aa3.85□□□□□ -1.79
EPB41-212ENST00000490308 USP17L3A6NCW0 530 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 USP17L4A6NCW7 530 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 RCCD1A6NED2 376 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 FDX1P10109 184 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 RASA1P20936 1047 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 MAPK1P28482 360 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 PRSS12P56730 875 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 NR1H3Q13133 447 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 SF3B2Q13435 895 aaKnown RBP3.84□□□□□ -1.79
EPB41-212ENST00000490308 C6orf132Q5T0Z8 1188 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 USP17L2Q6R6M4 530 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 DPH6Q7L8W6 267 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 USP17L1Q7RTZ2 530 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 TTC13Q8NBP0 860 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 NLRP7Q8WX94 980 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 TRIM34Q9BYJ4 488 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 MRS2Q9HD23 443 aa3.84□□□□□ -1.79
EPB41-212ENST00000490308 METTL5Q9NRN9 209 aaKnown RBP3.84□□□□□ -1.79
EPB41-212ENST00000490308 TLDC2A0PJX2 215 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 NBPF26B4DH59 902 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L15C9J2P7 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L10C9JJH3 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L13C9JLJ4 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L12C9JPN9 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L11C9JVI0 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L21D6R901 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L18D6R9N7 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L22D6RA61 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L17D6RBQ6 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L19D6RCP7 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L20D6RJB6 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 SKIP12755 728 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 IGBP1P78318 339 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 XPCQ01831 940 aaPredicted RBP3.83□□□□□ -1.8
EPB41-212ENST00000490308 CTDSPL2Q05D32 466 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 USP17L24Q0WX57 530 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 MAP7D1Q3KQU3 841 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 PPP4R3BQ5MIZ7 849 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 GORABQ5T7V8 394 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 RNF187Q5TA31 235 aaPredicted RBP3.83□□□□□ -1.8
EPB41-212ENST00000490308 CERS3Q8IU89 383 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 ZNF687Q8N1G0 1237 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 RDH13Q8NBN7 331 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 STK32AQ8WU08 396 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 TSC1Q92574 1164 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 BRINP2Q9C0B6 783 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 BCCIPQ9P287 314 aaKnown RBP eCLIP3.83□□□□□ -1.8
EPB41-212ENST00000490308 MAGEC2Q9UBF1 373 aaPredicted RBP3.83□□□□□ -1.8
EPB41-212ENST00000490308 ZMIZ1Q9ULJ6 1067 aa3.83□□□□□ -1.8
EPB41-212ENST00000490308 hCG_2014768A0A024R1R8 64 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 USP17L5A8MUK1 530 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 MARCH6O60337 910 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 RECKO95980 971 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 NDUFV2P19404 249 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 COL9A1P20849 921 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 ANAPC15P60006 121 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 SLFNL1Q499Z3 407 aa3.82□□□□□ -1.8
EPB41-212ENST00000490308 PHLDB3Q6NSJ2 640 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms