RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
TSC1-206ENST00000490179 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
TSC1-206ENST00000490179 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
TSC1-206ENST00000490179 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
TSC1-206ENST00000490179 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
TSC1-206ENST00000490179 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
TSC1-206ENST00000490179 PANK3Q9H999 370 aa20.27■□□□□ 0.84
TSC1-206ENST00000490179 SSH2Q76I76 1423 aa20.27■□□□□ 0.83
TSC1-206ENST00000490179 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.83
TSC1-206ENST00000490179 ALS2Q96Q42 1657 aa20.26■□□□□ 0.83
TSC1-206ENST00000490179 TTC21AQ8NDW8 1320 aa20.26■□□□□ 0.83
TSC1-206ENST00000490179 ARHGEF10O15013 1369 aa20.25■□□□□ 0.83
TSC1-206ENST00000490179 JCADQ9P266 1359 aa20.25■□□□□ 0.83
TSC1-206ENST00000490179 ILDR1Q86SU0 546 aaPredicted RBP20.25■□□□□ 0.83
TSC1-206ENST00000490179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.83
TSC1-206ENST00000490179 SHPRHQ149N8 1683 aa20.25■□□□□ 0.83
TSC1-206ENST00000490179 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
TSC1-206ENST00000490179 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
TSC1-206ENST00000490179 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
TSC1-206ENST00000490179 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
TSC1-206ENST00000490179 PIK3C2AO00443 1686 aa20.22■□□□□ 0.83
TSC1-206ENST00000490179 COL22A1Q8NFW1 1626 aaPredicted RBP20.21■□□□□ 0.83
TSC1-206ENST00000490179 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
TSC1-206ENST00000490179 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
TSC1-206ENST00000490179 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
TSC1-206ENST00000490179 NLRP6P59044 892 aa20.18■□□□□ 0.82
TSC1-206ENST00000490179 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
TSC1-206ENST00000490179 NME9Q86XW9 330 aa20.18■□□□□ 0.82
TSC1-206ENST00000490179 KNSTRNQ9Y448 316 aa20.18■□□□□ 0.82
TSC1-206ENST00000490179 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
TSC1-206ENST00000490179 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
TSC1-206ENST00000490179 MED1Q15648 1581 aaPredicted RBP20.17■□□□□ 0.82
TSC1-206ENST00000490179 HAP1P54257 671 aaPredicted RBP20.16■□□□□ 0.82
TSC1-206ENST00000490179 SPATA31A6Q5VVP1 1343 aa20.16■□□□□ 0.82
TSC1-206ENST00000490179 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
TSC1-206ENST00000490179 ABCA3Q99758 1704 aa20.14■□□□□ 0.81
TSC1-206ENST00000490179 USP54Q70EL1 1684 aa20.14■□□□□ 0.81
TSC1-206ENST00000490179 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.81
TSC1-206ENST00000490179 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
TSC1-206ENST00000490179 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
TSC1-206ENST00000490179 FYB1O15117 783 aa20.14■□□□□ 0.81
TSC1-206ENST00000490179 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
TSC1-206ENST00000490179 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
TSC1-206ENST00000490179 COG3Q96JB2 828 aa20.14■□□□□ 0.81
TSC1-206ENST00000490179 ZRANB1Q9UGI0 708 aa20.14■□□□□ 0.81
TSC1-206ENST00000490179 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
TSC1-206ENST00000490179 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
TSC1-206ENST00000490179 MARF1Q9Y4F3 1742 aaKnown RBP20.13■□□□□ 0.81
TSC1-206ENST00000490179 USP19O94966 1318 aa20.12■□□□□ 0.81
TSC1-206ENST00000490179 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
TSC1-206ENST00000490179 OVOS2A0A0J9YW53 1432 aa20.11■□□□□ 0.81
TSC1-206ENST00000490179 OVOS2Q6IE36 1432 aa20.11■□□□□ 0.81
TSC1-206ENST00000490179 NSD2O96028 1365 aa20.11■□□□□ 0.81
TSC1-206ENST00000490179 ANKRD26Q9UPS8 1709 aa20.11■□□□□ 0.81
TSC1-206ENST00000490179 SLIT3O75094 1523 aa20.1■□□□□ 0.81
TSC1-206ENST00000490179 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
TSC1-206ENST00000490179 SOX12O15370 315 aa20.08■□□□□ 0.81
TSC1-206ENST00000490179 GCP02774 474 aa20.08■□□□□ 0.81
TSC1-206ENST00000490179 AMER1Q5JTC6 1135 aaPredicted RBP20.08■□□□□ 0.81
TSC1-206ENST00000490179 LRP6O75581 1613 aa20.07■□□□□ 0.8
TSC1-206ENST00000490179 ADAMTS2O95450 1211 aa20.07■□□□□ 0.8
TSC1-206ENST00000490179 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
TSC1-206ENST00000490179 CC2D1BQ5T0F9 858 aaKnown RBP20.06■□□□□ 0.8
TSC1-206ENST00000490179 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
TSC1-206ENST00000490179 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
TSC1-206ENST00000490179 MORC1Q86VD1 984 aa20.05■□□□□ 0.8
TSC1-206ENST00000490179 NFAT5O94916 1531 aa20.04■□□□□ 0.8
TSC1-206ENST00000490179 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
TSC1-206ENST00000490179 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
TSC1-206ENST00000490179 KIAA0232Q92628 1395 aa20.02■□□□□ 0.8
TSC1-206ENST00000490179 CPDO75976 1380 aa20.01■□□□□ 0.79
TSC1-206ENST00000490179 PRDM11Q9NQV5 511 aa20.01■□□□□ 0.79
TSC1-206ENST00000490179 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
TSC1-206ENST00000490179 C8orf37Q96NL8 207 aa20■□□□□ 0.79
TSC1-206ENST00000490179 LTN1O94822 1766 aa20■□□□□ 0.79
TSC1-206ENST00000490179 COL14A1Q05707 1796 aaKnown RBP20■□□□□ 0.79
TSC1-206ENST00000490179 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
TSC1-206ENST00000490179 CHRNA2Q15822 529 aa19.98■□□□□ 0.79
TSC1-206ENST00000490179 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
TSC1-206ENST00000490179 FAM83GA6ND36 823 aa19.97■□□□□ 0.79
TSC1-206ENST00000490179 FBLN1P23142 703 aa19.97■□□□□ 0.79
TSC1-206ENST00000490179 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
TSC1-206ENST00000490179 AATKQ6ZMQ8 1374 aa19.96■□□□□ 0.79
TSC1-206ENST00000490179 RRS1Q15050 365 aaKnown RBP19.96■□□□□ 0.79
TSC1-206ENST00000490179 MAP2P11137 1827 aaKnown RBP19.95■□□□□ 0.78
TSC1-206ENST00000490179 MAP3K19Q56UN5 1328 aa19.95■□□□□ 0.78
TSC1-206ENST00000490179 ABCC6O95255 1503 aa19.94■□□□□ 0.78
TSC1-206ENST00000490179 AMPHP49418 695 aa19.94■□□□□ 0.78
TSC1-206ENST00000490179 NWD2Q9ULI1 1742 aa19.93■□□□□ 0.78
TSC1-206ENST00000490179 BTG4Q9NY30 223 aa19.93■□□□□ 0.78
TSC1-206ENST00000490179 AFF2P51816 1311 aa19.93■□□□□ 0.78
TSC1-206ENST00000490179 LMO7Q8WWI1 1683 aa19.93■□□□□ 0.78
TSC1-206ENST00000490179 COL18A1P39060 1754 aa19.93■□□□□ 0.78
TSC1-206ENST00000490179 SLIT2O94813 1529 aa19.92■□□□□ 0.78
TSC1-206ENST00000490179 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
TSC1-206ENST00000490179 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
TSC1-206ENST00000490179 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
TSC1-206ENST00000490179 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
TSC1-206ENST00000490179 RTL1A6NKG5 1358 aa19.92■□□□□ 0.78
TSC1-206ENST00000490179 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms