RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
ERCC3-207ENST00000490062 TERF2IPQ9NYB0 399 aa24.29■■□□□ 1.48
ERCC3-207ENST00000490062 C11orf95C9JLR9 678 aaPredicted RBP24.28■■□□□ 1.48
ERCC3-207ENST00000490062 MED1Q15648 1581 aaPredicted RBP24.28■■□□□ 1.48
ERCC3-207ENST00000490062 A0A1W2PP64 1363 aa24.28■■□□□ 1.48
ERCC3-207ENST00000490062 TMC1Q8TDI8 760 aa24.27■■□□□ 1.48
ERCC3-207ENST00000490062 HDGFL2Q7Z4V5 671 aaPredicted RBP24.26■■□□□ 1.47
ERCC3-207ENST00000490062 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
ERCC3-207ENST00000490062 EDC4Q6P2E9 1401 aaKnown RBP24.26■■□□□ 1.47
ERCC3-207ENST00000490062 TTC21AQ8NDW8 1320 aa24.25■■□□□ 1.47
ERCC3-207ENST00000490062 KIF7Q2M1P5 1343 aa24.23■■□□□ 1.47
ERCC3-207ENST00000490062 TTC21BQ7Z4L5 1316 aa24.23■■□□□ 1.47
ERCC3-207ENST00000490062 CRYBG1Q9Y4K1 1723 aa24.21■■□□□ 1.47
ERCC3-207ENST00000490062 USP54Q70EL1 1684 aa24.21■■□□□ 1.47
ERCC3-207ENST00000490062 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
ERCC3-207ENST00000490062 LRP6O75581 1613 aa24.2■■□□□ 1.46
ERCC3-207ENST00000490062 ABCA3Q99758 1704 aa24.19■■□□□ 1.46
ERCC3-207ENST00000490062 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
ERCC3-207ENST00000490062 USP31Q70CQ4 1352 aa24.18■■□□□ 1.46
ERCC3-207ENST00000490062 USP19O94966 1318 aa24.18■■□□□ 1.46
ERCC3-207ENST00000490062 PAK3O75914 559 aaPredicted RBP24.18■■□□□ 1.46
ERCC3-207ENST00000490062 WASHC2AQ641Q2 1341 aa24.17■■□□□ 1.46
ERCC3-207ENST00000490062 ABTB2Q8N961 1025 aa24.16■■□□□ 1.46
ERCC3-207ENST00000490062 NLRP13Q86W25 1043 aa24.15■■□□□ 1.46
ERCC3-207ENST00000490062 MARF1Q9Y4F3 1742 aaKnown RBP24.14■■□□□ 1.45
ERCC3-207ENST00000490062 SLIT3O75094 1523 aa24.14■■□□□ 1.45
ERCC3-207ENST00000490062 PHRF1Q9P1Y6 1649 aaKnown RBP24.13■■□□□ 1.45
ERCC3-207ENST00000490062 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
ERCC3-207ENST00000490062 CARD14Q9BXL6 1004 aa24.13■■□□□ 1.45
ERCC3-207ENST00000490062 OVOS2A0A0J9YW53 1432 aa24.11■■□□□ 1.45
ERCC3-207ENST00000490062 OVOS2Q6IE36 1432 aa24.11■■□□□ 1.45
ERCC3-207ENST00000490062 NLRP6P59044 892 aa24.09■■□□□ 1.45
ERCC3-207ENST00000490062 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
ERCC3-207ENST00000490062 NSD3Q9BZ95 1437 aa24.09■■□□□ 1.45
ERCC3-207ENST00000490062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.08■■□□□ 1.45
ERCC3-207ENST00000490062 PANK3Q9H999 370 aa24.08■■□□□ 1.45
ERCC3-207ENST00000490062 CPDO75976 1380 aa24.07■■□□□ 1.44
ERCC3-207ENST00000490062 NUTM2BA6NNL0 878 aaPredicted RBP24.07■■□□□ 1.44
ERCC3-207ENST00000490062 NUTM2EB1AL46 878 aaPredicted RBP24.07■■□□□ 1.44
ERCC3-207ENST00000490062 NME9Q86XW9 330 aa24.07■■□□□ 1.44
ERCC3-207ENST00000490062 NUTM2AQ8IVF1 878 aaPredicted RBP24.07■■□□□ 1.44
ERCC3-207ENST00000490062 CABLES1Q8TDN4 633 aa24.07■■□□□ 1.44
ERCC3-207ENST00000490062 FYB1O15117 783 aa24.06■■□□□ 1.44
ERCC3-207ENST00000490062 GCP02774 474 aa24.05■■□□□ 1.44
ERCC3-207ENST00000490062 NUTM2GQ5VZR2 741 aa24.05■■□□□ 1.44
ERCC3-207ENST00000490062 KIF20BQ96Q89 1820 aa24.05■■□□□ 1.44
ERCC3-207ENST00000490062 KCNH5Q8NCM2 988 aa24.04■■□□□ 1.44
ERCC3-207ENST00000490062 NFAT5O94916 1531 aa24.04■■□□□ 1.44
ERCC3-207ENST00000490062 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
ERCC3-207ENST00000490062 CGNL1Q0VF96 1302 aa24.03■■□□□ 1.44
ERCC3-207ENST00000490062 SLIT2O94813 1529 aa24.02■■□□□ 1.44
ERCC3-207ENST00000490062 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
ERCC3-207ENST00000490062 NSD2O96028 1365 aa24.02■■□□□ 1.44
ERCC3-207ENST00000490062 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
ERCC3-207ENST00000490062 HAP1P54257 671 aaPredicted RBP24.01■■□□□ 1.43
ERCC3-207ENST00000490062 COL14A1Q05707 1796 aaKnown RBP24.01■■□□□ 1.43
ERCC3-207ENST00000490062 MEX3CQ5U5Q3 659 aaKnown RBP24■■□□□ 1.43
ERCC3-207ENST00000490062 ZRANB1Q9UGI0 708 aa24■■□□□ 1.43
ERCC3-207ENST00000490062 ABCC6O95255 1503 aa24■■□□□ 1.43
ERCC3-207ENST00000490062 NWD2Q9ULI1 1742 aa23.99■■□□□ 1.43
ERCC3-207ENST00000490062 COG3Q96JB2 828 aa23.99■■□□□ 1.43
ERCC3-207ENST00000490062 NPC1L1Q9UHC9 1359 aa23.99■■□□□ 1.43
ERCC3-207ENST00000490062 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
ERCC3-207ENST00000490062 KIAA0232Q92628 1395 aa23.98■■□□□ 1.43
ERCC3-207ENST00000490062 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.98■■□□□ 1.43
ERCC3-207ENST00000490062 FAM83GA6ND36 823 aa23.97■■□□□ 1.43
ERCC3-207ENST00000490062 LMO7Q8WWI1 1683 aa23.96■■□□□ 1.43
ERCC3-207ENST00000490062 AMER1Q5JTC6 1135 aaPredicted RBP23.96■■□□□ 1.43
ERCC3-207ENST00000490062 ARHGEF25Q86VW2 580 aa23.96■■□□□ 1.43
ERCC3-207ENST00000490062 C8orf37Q96NL8 207 aa23.96■■□□□ 1.43
ERCC3-207ENST00000490062 GGNBP2Q9H3C7 697 aa23.96■■□□□ 1.43
ERCC3-207ENST00000490062 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
ERCC3-207ENST00000490062 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.43
ERCC3-207ENST00000490062 BCL9LQ86UU0 1499 aa23.95■■□□□ 1.42
ERCC3-207ENST00000490062 AATKQ6ZMQ8 1374 aa23.95■■□□□ 1.42
ERCC3-207ENST00000490062 AFF2P51816 1311 aa23.95■■□□□ 1.42
ERCC3-207ENST00000490062 NGLY1Q96IV0 654 aa23.95■■□□□ 1.42
ERCC3-207ENST00000490062 RGS17Q9UGC6 210 aaPredicted RBP23.95■■□□□ 1.42
ERCC3-207ENST00000490062 COL18A1P39060 1754 aa23.94■■□□□ 1.42
ERCC3-207ENST00000490062 ZNF772Q68DY9 489 aaPredicted RBP23.94■■□□□ 1.42
ERCC3-207ENST00000490062 PRDM11Q9NQV5 511 aa23.94■■□□□ 1.42
ERCC3-207ENST00000490062 ZC3H6P61129 1189 aaKnown RBP23.93■■□□□ 1.42
ERCC3-207ENST00000490062 NRAPQ86VF7 1730 aa23.92■■□□□ 1.42
ERCC3-207ENST00000490062 PLEKHG5O94827 1062 aa23.91■■□□□ 1.42
ERCC3-207ENST00000490062 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
ERCC3-207ENST00000490062 KIF24Q5T7B8 1368 aa23.9■■□□□ 1.42
ERCC3-207ENST00000490062 UNC5CLQ8IV45 518 aa23.89■■□□□ 1.41
ERCC3-207ENST00000490062 USP21Q9UK80 565 aa23.89■■□□□ 1.41
ERCC3-207ENST00000490062 ATRNO75882 1429 aa23.89■■□□□ 1.41
ERCC3-207ENST00000490062 CAMTA1Q9Y6Y1 1673 aa23.89■■□□□ 1.41
ERCC3-207ENST00000490062 LTN1O94822 1766 aa23.88■■□□□ 1.41
ERCC3-207ENST00000490062 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
ERCC3-207ENST00000490062 RTL1A6NKG5 1358 aa23.87■■□□□ 1.41
ERCC3-207ENST00000490062 CHRNA2Q15822 529 aa23.86■■□□□ 1.41
ERCC3-207ENST00000490062 BTG4Q9NY30 223 aa23.86■■□□□ 1.41
ERCC3-207ENST00000490062 TRPC5Q9UL62 973 aaPredicted RBP23.85■■□□□ 1.41
ERCC3-207ENST00000490062 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
ERCC3-207ENST00000490062 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
ERCC3-207ENST00000490062 COL5A2P05997 1499 aaPredicted RBP23.84■■□□□ 1.41
ERCC3-207ENST00000490062 VPS72Q15906 364 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms