RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 SDF4Q9BRK5 362 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 IQCEQ6IPM2 695 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 KIAA1107Q9UPP5 1409 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 WWC2Q6AWC2 1192 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 GNL3LQ9NVN8 582 aaKnown RBP10.57□□□□□ -0.72
LSAMP-205ENST00000490035 VPS37CA5D8V6 355 aaPredicted RBP10.57□□□□□ -0.72
LSAMP-205ENST00000490035 STIM1Q13586 685 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 EIF2S2P20042 333 aaKnown RBP10.57□□□□□ -0.72
LSAMP-205ENST00000490035 MAGEC2Q9UBF1 373 aaPredicted RBP10.57□□□□□ -0.72
LSAMP-205ENST00000490035 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
LSAMP-205ENST00000490035 KIF6Q6ZMV9 814 aa10.57□□□□□ -0.72
LSAMP-205ENST00000490035 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
LSAMP-205ENST00000490035 GNAI2P04899 355 aa10.56□□□□□ -0.72
LSAMP-205ENST00000490035 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
LSAMP-205ENST00000490035 ANKRD18AQ8IVF6 992 aa10.56□□□□□ -0.72
LSAMP-205ENST00000490035 BCL2L13Q9BXK5 485 aa10.56□□□□□ -0.72
LSAMP-205ENST00000490035 ZNHIT6Q9NWK9 470 aaKnown RBP10.56□□□□□ -0.72
LSAMP-205ENST00000490035 CDKL5O76039 1030 aa10.55□□□□□ -0.72
LSAMP-205ENST00000490035 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
LSAMP-205ENST00000490035 FOXD4L4Q8WXT5 416 aaPredicted RBP10.55□□□□□ -0.72
LSAMP-205ENST00000490035 SLC52A1Q9NWF4 448 aa10.55□□□□□ -0.72
LSAMP-205ENST00000490035 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
LSAMP-205ENST00000490035 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 CFAP45Q9UL16 551 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 NAP1L1P55209 391 aaKnown RBP10.54□□□□□ -0.72
LSAMP-205ENST00000490035 KRT32Q14532 448 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
LSAMP-205ENST00000490035 TSPY26PQ9H489 355 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 CCDC192P0DO97 292 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
LSAMP-205ENST00000490035 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
LSAMP-205ENST00000490035 MAP3K1Q13233 1512 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 KIF14Q15058 1648 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 PLIN1O60240 522 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 SYCP1Q15431 976 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 ITSN2Q9NZM3 1697 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 TRIM22Q8IYM9 498 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 NACAP1Q9BZK3 213 aa10.53□□□□□ -0.72
LSAMP-205ENST00000490035 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.72
LSAMP-205ENST00000490035 CDK5RAP3Q96JB5 506 aa10.52□□□□□ -0.72
LSAMP-205ENST00000490035 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.72
LSAMP-205ENST00000490035 GOLGA6L7A0A1B0GV03 622 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 EIF3JO75822 258 aaKnown RBP10.52□□□□□ -0.73
LSAMP-205ENST00000490035 RUSC2Q8N2Y8 1516 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 HSP90AB2PQ58FF8 381 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 LNPKQ9C0E8 428 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 KIF2AO00139 706 aaPredicted RBP10.52□□□□□ -0.73
LSAMP-205ENST00000490035 WASHC4Q2M389 1173 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 TRAK2O60296 914 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 DNAI2Q9GZS0 605 aa10.52□□□□□ -0.73
LSAMP-205ENST00000490035 LEKR1Q6ZMV7 388 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 CTNNA3Q9UI47 895 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 DESP17661 470 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 PDCL2Q8N4E4 241 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 ZSCAN31Q96LW9 406 aaPredicted RBP10.51□□□□□ -0.73
LSAMP-205ENST00000490035 CFTRP13569 1480 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 WASF1Q92558 559 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 TRIM5Q9C035 493 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 POGZQ7Z3K3 1410 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 FSD1Q9BTV5 496 aa10.51□□□□□ -0.73
LSAMP-205ENST00000490035 ERLIN1O75477 346 aa10.5□□□□□ -0.73
LSAMP-205ENST00000490035 ARID3AQ99856 593 aa10.5□□□□□ -0.73
LSAMP-205ENST00000490035 CYP46A1Q9Y6A2 500 aa10.5□□□□□ -0.73
LSAMP-205ENST00000490035 KRT85P78386 507 aa10.5□□□□□ -0.73
LSAMP-205ENST00000490035 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
LSAMP-205ENST00000490035 TAF3Q5VWG9 929 aa10.5□□□□□ -0.73
LSAMP-205ENST00000490035 TROQ12816 1431 aaPredicted RBP10.5□□□□□ -0.73
LSAMP-205ENST00000490035 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
LSAMP-205ENST00000490035 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
LSAMP-205ENST00000490035 TRIM21P19474 475 aaKnown RBP10.49□□□□□ -0.73
LSAMP-205ENST00000490035 SMC2O95347 1197 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 USP8P40818 1118 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 NEUROD6Q96NK8 337 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 ZNF287Q9HBT7 754 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 FAM13BQ9NYF5 915 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
LSAMP-205ENST00000490035 MCM3P25205 808 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 NOL7Q9UMY1 257 aaKnown RBP10.49□□□□□ -0.73
LSAMP-205ENST00000490035 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 MTHFSP49914 203 aa10.49□□□□□ -0.73
LSAMP-205ENST00000490035 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
LSAMP-205ENST00000490035 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 CEP131Q9UPN4 1083 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 ERBINQ96RT1 1412 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 SMTNL1A8MU46 457 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 H0YHG0 523 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
LSAMP-205ENST00000490035 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 IQGAP2Q13576 1575 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms