RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 TTC21BQ7Z4L5 1316 aa19.71■□□□□ 0.75
COMMD2-206ENST00000490008 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
COMMD2-206ENST00000490008 MEX3CQ5U5Q3 659 aaKnown RBP19.7■□□□□ 0.74
COMMD2-206ENST00000490008 PXDNQ92626 1479 aa19.7■□□□□ 0.74
COMMD2-206ENST00000490008 SPATA31A6Q5VVP1 1343 aa19.7■□□□□ 0.74
COMMD2-206ENST00000490008 TTC21AQ8NDW8 1320 aa19.69■□□□□ 0.74
COMMD2-206ENST00000490008 CPSF1Q10570 1443 aaKnown RBP19.68■□□□□ 0.74
COMMD2-206ENST00000490008 CABLES1Q8TDN4 633 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 PNPLA6Q8IY17 1366 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 ITSN1Q15811 1721 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 USP6P35125 1406 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
COMMD2-206ENST00000490008 A0A1W2PP64 1363 aa19.67■□□□□ 0.74
COMMD2-206ENST00000490008 CCDC7Q96M83 1385 aa19.67■□□□□ 0.74
COMMD2-206ENST00000490008 ADAMTS2O95450 1211 aa19.66■□□□□ 0.74
COMMD2-206ENST00000490008 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
COMMD2-206ENST00000490008 KNSTRNQ9Y448 316 aa19.65■□□□□ 0.74
COMMD2-206ENST00000490008 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
COMMD2-206ENST00000490008 COL16A1Q07092 1604 aaPredicted RBP19.64■□□□□ 0.73
COMMD2-206ENST00000490008 NME9Q86XW9 330 aa19.63■□□□□ 0.73
COMMD2-206ENST00000490008 EDC4Q6P2E9 1401 aaKnown RBP19.62■□□□□ 0.73
COMMD2-206ENST00000490008 COG3Q96JB2 828 aa19.62■□□□□ 0.73
COMMD2-206ENST00000490008 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
COMMD2-206ENST00000490008 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
COMMD2-206ENST00000490008 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
COMMD2-206ENST00000490008 NGLY1Q96IV0 654 aa19.61■□□□□ 0.73
COMMD2-206ENST00000490008 SSH2Q76I76 1423 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 FYB1O15117 783 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 SOX12O15370 315 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 GCP02774 474 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 KCNH5Q8NCM2 988 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
COMMD2-206ENST00000490008 C8orf37Q96NL8 207 aa19.59■□□□□ 0.73
COMMD2-206ENST00000490008 GGNBP2Q9H3C7 697 aa19.59■□□□□ 0.73
COMMD2-206ENST00000490008 ZBTB7CA1YPR0 619 aa19.58■□□□□ 0.72
COMMD2-206ENST00000490008 ZC3H6P61129 1189 aaKnown RBP19.58■□□□□ 0.72
COMMD2-206ENST00000490008 NSD3Q9BZ95 1437 aa19.57■□□□□ 0.72
COMMD2-206ENST00000490008 DDX10Q13206 875 aaKnown RBP19.56■□□□□ 0.72
COMMD2-206ENST00000490008 PRDM11Q9NQV5 511 aa19.55■□□□□ 0.72
COMMD2-206ENST00000490008 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
COMMD2-206ENST00000490008 USP31Q70CQ4 1352 aa19.54■□□□□ 0.72
COMMD2-206ENST00000490008 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
COMMD2-206ENST00000490008 USP19O94966 1318 aa19.52■□□□□ 0.72
COMMD2-206ENST00000490008 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
COMMD2-206ENST00000490008 PER1O15534 1290 aaPredicted RBP19.51■□□□□ 0.71
COMMD2-206ENST00000490008 TRPM3Q9HCF6 1732 aaPredicted RBP19.51■□□□□ 0.71
COMMD2-206ENST00000490008 SHPRHQ149N8 1683 aa19.5■□□□□ 0.71
COMMD2-206ENST00000490008 EVA1CP58658 441 aa19.5■□□□□ 0.71
COMMD2-206ENST00000490008 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
COMMD2-206ENST00000490008 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
COMMD2-206ENST00000490008 CC2D1BQ5T0F9 858 aaKnown RBP19.49■□□□□ 0.71
COMMD2-206ENST00000490008 ZNF772Q68DY9 489 aaPredicted RBP19.49■□□□□ 0.71
COMMD2-206ENST00000490008 USP21Q9UK80 565 aa19.49■□□□□ 0.71
COMMD2-206ENST00000490008 KIAA0232Q92628 1395 aa19.48■□□□□ 0.71
COMMD2-206ENST00000490008 AKAP12Q02952 1782 aa19.48■□□□□ 0.71
COMMD2-206ENST00000490008 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
COMMD2-206ENST00000490008 AFF2P51816 1311 aa19.48■□□□□ 0.71
COMMD2-206ENST00000490008 AMPHP49418 695 aa19.47■□□□□ 0.71
COMMD2-206ENST00000490008 AMER1Q5JTC6 1135 aaPredicted RBP19.47■□□□□ 0.71
COMMD2-206ENST00000490008 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
COMMD2-206ENST00000490008 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
COMMD2-206ENST00000490008 FBLN1P23142 703 aa19.46■□□□□ 0.71
COMMD2-206ENST00000490008 QTRT2Q9H974 415 aaKnown RBP19.46■□□□□ 0.71
COMMD2-206ENST00000490008 LRP6O75581 1613 aa19.46■□□□□ 0.71
COMMD2-206ENST00000490008 ALS2Q96Q42 1657 aa19.46■□□□□ 0.71
COMMD2-206ENST00000490008 MED1Q15648 1581 aaPredicted RBP19.45■□□□□ 0.7
COMMD2-206ENST00000490008 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
COMMD2-206ENST00000490008 PPM1GO15355 546 aaPredicted RBP19.45■□□□□ 0.7
COMMD2-206ENST00000490008 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
COMMD2-206ENST00000490008 MON2Q7Z3U7 1717 aa19.45■□□□□ 0.7
COMMD2-206ENST00000490008 NSD2O96028 1365 aa19.44■□□□□ 0.7
COMMD2-206ENST00000490008 STRN4Q9NRL3 753 aa19.44■□□□□ 0.7
COMMD2-206ENST00000490008 CCDC9Q9Y3X0 531 aaKnown RBP19.44■□□□□ 0.7
COMMD2-206ENST00000490008 CPDO75976 1380 aa19.44■□□□□ 0.7
COMMD2-206ENST00000490008 RRS1Q15050 365 aaKnown RBP19.43■□□□□ 0.7
COMMD2-206ENST00000490008 MYOM1P52179 1685 aa19.43■□□□□ 0.7
COMMD2-206ENST00000490008 TRPC5Q9UL62 973 aaPredicted RBP19.42■□□□□ 0.7
COMMD2-206ENST00000490008 OVOS2A0A0J9YW53 1432 aa19.42■□□□□ 0.7
COMMD2-206ENST00000490008 OVOS2Q6IE36 1432 aa19.42■□□□□ 0.7
COMMD2-206ENST00000490008 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
COMMD2-206ENST00000490008 IP6K1Q92551 441 aa19.41■□□□□ 0.7
COMMD2-206ENST00000490008 PIK3C2AO00443 1686 aa19.4■□□□□ 0.7
COMMD2-206ENST00000490008 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
COMMD2-206ENST00000490008 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.69
COMMD2-206ENST00000490008 AXIN2Q9Y2T1 843 aa19.39■□□□□ 0.69
COMMD2-206ENST00000490008 MAP3K19Q56UN5 1328 aa19.39■□□□□ 0.69
COMMD2-206ENST00000490008 NRKQ7Z2Y5 1582 aa19.39■□□□□ 0.69
COMMD2-206ENST00000490008 SLIT3O75094 1523 aa19.38■□□□□ 0.69
COMMD2-206ENST00000490008 RXRBP28702 533 aa19.38■□□□□ 0.69
COMMD2-206ENST00000490008 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
COMMD2-206ENST00000490008 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
COMMD2-206ENST00000490008 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
COMMD2-206ENST00000490008 HOXC9P31274 260 aa19.36■□□□□ 0.69
COMMD2-206ENST00000490008 VPS72Q15906 364 aa19.36■□□□□ 0.69
COMMD2-206ENST00000490008 TOM1L2Q6ZVM7 507 aa19.36■□□□□ 0.69
COMMD2-206ENST00000490008 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
COMMD2-206ENST00000490008 POTEAQ6S8J7 498 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms